RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 PTGER4P35408 488 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 SOAT1P35610 550 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 CHI3L1P36222 383 aaPredicted RBP2.21□□□□□ -2.06
VPS13A-208ENST00000423463 MAGEA5P43359 124 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 ZFP36L2P47974 494 aaKnown RBP2.21□□□□□ -2.06
VPS13A-208ENST00000423463 RFX3P48380 749 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 ATP12AP54707 1039 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 GAS1P54826 345 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 KRTAP10-9P60411 292 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 C3AR1Q16581 482 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 C2orf68Q2NKX9 166 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 ARHGAP11BQ3KRB8 267 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 AGKQ53H12 422 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 NHSL2Q5HYW2 709 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 ATAD3BQ5T9A4 648 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 WLSQ5T9L3 541 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 TMEM211Q6ICI0 200 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 MTERF4Q7Z6M4 381 aaKnown RBP2.21□□□□□ -2.06
VPS13A-208ENST00000423463 ANKRD46Q86W74 232 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 DOLPP1Q86YN1 238 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 FUNDC1Q8IVP5 155 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 MISPQ8IVT2 679 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 CHERPQ8IWX8 916 aaKnown RBP2.21□□□□□ -2.06
VPS13A-208ENST00000423463 WDSUB1Q8N9V3 476 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 OR4C3Q8NH37 302 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 NEIL3Q8TAT5 605 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 ZFP90Q8TF47 636 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 DUSP19Q8WTR2 217 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 PHF10Q8WUB8 498 aaKnown RBP2.21□□□□□ -2.06
VPS13A-208ENST00000423463 CDS1Q92903 461 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 SPDL1Q96EA4 605 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 CHMP6Q96FZ7 201 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 SLC35G5Q96KT7 338 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 OR7D2Q96RA2 312 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 SLC35A5Q9BS91 424 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 INPP5KQ9BT40 448 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 TBL1XR1Q9BZK7 514 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 OR2B2Q9GZK3 357 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 OR51I1Q9H343 314 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 DSN1Q9H410 356 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 RAD21L1Q9H4I0 556 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 ESRP2Q9H6T0 727 aaKnown RBP2.21□□□□□ -2.06
VPS13A-208ENST00000423463 EXO5Q9H790 373 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 PTGES2Q9H7Z7 377 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 RANGRFQ9HD47 186 aaPredicted RBP2.21□□□□□ -2.06
VPS13A-208ENST00000423463 FGFR1OP2Q9NVK5 253 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 THUMPD1Q9NXG2 353 aaKnown RBP2.21□□□□□ -2.06
VPS13A-208ENST00000423463 ERRFI1Q9UJM3 462 aaPredicted RBP2.21□□□□□ -2.06
VPS13A-208ENST00000423463 PRDM4Q9UKN5 801 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 ACAD8Q9UKU7 415 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 WIF1Q9Y5W5 379 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 GMEB1Q9Y692 573 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 KCNE3Q9Y6H6 103 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 PIEZO2Q9H5I5 2752 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 CPAMD8Q8IZJ3 1885 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 A0A087WZY1 265 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 A0A096LPI6 279 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 A0A0G2JND7 137 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 A0A1W2PP18 115 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 C9JVG2 144 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 NPIPA2E9PIF3 369 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 NPIPA3F8WFD2 350 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 H3BNH8 94 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 CCL21O00585 134 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 SLC22A2O15244 555 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 LRRTM2O43300 516 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 SCO2O43819 266 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 CDC40O60508 579 aaKnown RBP eCLIP2.21□□□□□ -2.06
VPS13A-208ENST00000423463 EIF4E2O60573 245 aaKnown RBP2.21□□□□□ -2.06
VPS13A-208ENST00000423463 WDR1O75083 606 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 OXSR1O95747 527 aaPredicted RBP2.21□□□□□ -2.06
VPS13A-208ENST00000423463 ANGPTL1O95841 491 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 LDLRP01130 860 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 TPOP07202 933 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 OR12D1P0DN82 309 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 GABRA1P14867 456 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 CPN1P15169 458 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 TMEM11P17152 192 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 PPIBP23284 216 aaKnown RBP2.21□□□□□ -2.06
VPS13A-208ENST00000423463 DPP4P27487 766 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 EVI2BP34910 448 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 KHKP50053 298 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 SMSP52788 366 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 DSCR4P56555 118 aaPredicted RBP2.21□□□□□ -2.06
VPS13A-208ENST00000423463 BRWD1-AS2P59051 145 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 SORDQ00796 357 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 RCAN2Q14206 197 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 GNA13Q14344 377 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 GANABQ14697 944 aaKnown RBP2.21□□□□□ -2.06
VPS13A-208ENST00000423463 ZNF141Q15928 474 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 BCL2A1Q16548 175 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 ZNF630Q2M218 657 aaPredicted RBP2.21□□□□□ -2.06
VPS13A-208ENST00000423463 KLHL26Q53HC5 615 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 FAM76BQ5HYJ3 339 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 DCST2Q5T1A1 773 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 LRIF1Q5T3J3 769 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 WDR73Q6P4I2 378 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 XKRXQ6PP77 449 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 ENPP6Q6UWR7 440 aa2.21□□□□□ -2.06
VPS13A-208ENST00000423463 APOOLQ6UXV4 268 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms