RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 GMPR2Q9P2T1 348 aaKnown RBP9.54□□□□□ -0.88
SSBP3-206ENST00000420121 ZNF229Q9UJW7 825 aa9.54□□□□□ -0.88
SSBP3-206ENST00000420121 ZNF726A6NNF4 738 aa9.53□□□□□ -0.88
SSBP3-206ENST00000420121 BBIP1A8MTZ0 92 aa9.53□□□□□ -0.88
SSBP3-206ENST00000420121 A8MV72 311 aaPredicted RBP9.53□□□□□ -0.88
SSBP3-206ENST00000420121 SHOX2O60902 331 aaPredicted RBP9.53□□□□□ -0.88
SSBP3-206ENST00000420121 NPPAP01160 153 aa9.53□□□□□ -0.88
SSBP3-206ENST00000420121 TP53P04637 393 aaPredicted RBP9.53□□□□□ -0.88
SSBP3-206ENST00000420121 CSF3P09919 207 aa9.53□□□□□ -0.88
SSBP3-206ENST00000420121 PGA4P0DJD7 388 aa9.53□□□□□ -0.88
SSBP3-206ENST00000420121 PGA3P0DJD8 388 aa9.53□□□□□ -0.88
SSBP3-206ENST00000420121 IGHV4-31P0DP07 118 aa9.53□□□□□ -0.88
SSBP3-206ENST00000420121 TROVE2P10155 538 aaKnown RBP eCLIP9.53□□□□□ -0.88
SSBP3-206ENST00000420121 ZNF35P13682 527 aa9.53□□□□□ -0.88
SSBP3-206ENST00000420121 CSNK1A1P48729 337 aa9.53□□□□□ -0.88
SSBP3-206ENST00000420121 GUCY1A3Q02108 690 aa9.53□□□□□ -0.88
SSBP3-206ENST00000420121 RUNX1T1Q06455 604 aa9.53□□□□□ -0.88
SSBP3-206ENST00000420121 PIGFQ07326 219 aa9.53□□□□□ -0.88
SSBP3-206ENST00000420121 MELKQ14680 651 aa9.53□□□□□ -0.88
SSBP3-206ENST00000420121 HIST3H3Q16695 136 aa9.53□□□□□ -0.88
SSBP3-206ENST00000420121 GSG1Q2KHT4 349 aa9.53□□□□□ -0.88
SSBP3-206ENST00000420121 ZNF584Q8IVC4 421 aa9.53□□□□□ -0.88
SSBP3-206ENST00000420121 SKA3Q8IX90 412 aa9.53□□□□□ -0.88
SSBP3-206ENST00000420121 CDK20Q8IZL9 346 aa9.53□□□□□ -0.88
SSBP3-206ENST00000420121 ZCCHC24Q8N2G6 241 aaKnown RBP9.53□□□□□ -0.88
SSBP3-206ENST00000420121 OR6N1Q8NGY5 312 aa9.53□□□□□ -0.88
SSBP3-206ENST00000420121 PFN4Q8NHR9 129 aa9.53□□□□□ -0.88
SSBP3-206ENST00000420121 SLC26A7Q8TE54 656 aa9.53□□□□□ -0.88
SSBP3-206ENST00000420121 TMEM255BQ8WV15 326 aa9.53□□□□□ -0.88
SSBP3-206ENST00000420121 RASSF5Q8WWW0 418 aa9.53□□□□□ -0.88
SSBP3-206ENST00000420121 SEPHS2Q99611 448 aa9.53□□□□□ -0.88
SSBP3-206ENST00000420121 B3GAT2Q9NPZ5 323 aa9.53□□□□□ -0.88
SSBP3-206ENST00000420121 C20orf141Q9NUB4 165 aa9.53□□□□□ -0.88
SSBP3-206ENST00000420121 GLTPQ9NZD2 209 aa9.53□□□□□ -0.88
SSBP3-206ENST00000420121 SH3GLB1Q9Y371 365 aa9.53□□□□□ -0.88
SSBP3-206ENST00000420121 STAB1Q9NY15 2570 aa9.52□□□□□ -0.89
SSBP3-206ENST00000420121 IGHV4-61A0A0C4DH41 118 aa9.52□□□□□ -0.89
SSBP3-206ENST00000420121 LOC100653049A0A140TA62 436 aa9.52□□□□□ -0.89
SSBP3-206ENST00000420121 FAM220BPB1ANY3 271 aa9.52□□□□□ -0.89
SSBP3-206ENST00000420121 hCG_2039718K7EN88 272 aa9.52□□□□□ -0.89
SSBP3-206ENST00000420121 NDUFS8O00217 210 aa9.52□□□□□ -0.89
SSBP3-206ENST00000420121 KRT34O76011 436 aa9.52□□□□□ -0.89
SSBP3-206ENST00000420121 IGF2P01344 180 aa9.52□□□□□ -0.89
SSBP3-206ENST00000420121 MT-ND1P03886 318 aa9.52□□□□□ -0.89
SSBP3-206ENST00000420121 PATE4P0C8F1 98 aa9.52□□□□□ -0.89
SSBP3-206ENST00000420121 CD79AP11912 226 aa9.52□□□□□ -0.89
SSBP3-206ENST00000420121 NPR2P20594 1047 aa9.52□□□□□ -0.89
SSBP3-206ENST00000420121 NR4A1P22736 598 aa9.52□□□□□ -0.89
SSBP3-206ENST00000420121 NR4A2P43354 598 aa9.52□□□□□ -0.89
SSBP3-206ENST00000420121 CAPZA2P47755 286 aa9.52□□□□□ -0.89
SSBP3-206ENST00000420121 OR1E2P47887 323 aa9.52□□□□□ -0.89
SSBP3-206ENST00000420121 GIPRP48546 466 aa9.52□□□□□ -0.89
SSBP3-206ENST00000420121 PDLIM4P50479 330 aa9.52□□□□□ -0.89
SSBP3-206ENST00000420121 RPL18Q07020 188 aaKnown RBP9.52□□□□□ -0.89
SSBP3-206ENST00000420121 SNTB2Q13425 540 aaKnown RBP9.52□□□□□ -0.89
SSBP3-206ENST00000420121 PIN1Q13526 163 aaPredicted RBP9.52□□□□□ -0.89
SSBP3-206ENST00000420121 DAG1Q14118 895 aa9.52□□□□□ -0.89
SSBP3-206ENST00000420121 FXNQ16595 210 aa9.52□□□□□ -0.89
SSBP3-206ENST00000420121 KRT80Q6KB66 452 aa9.52□□□□□ -0.89
SSBP3-206ENST00000420121 ERICH5Q6P6B1 374 aa9.52□□□□□ -0.89
SSBP3-206ENST00000420121 SVOPLQ8N434 492 aa9.52□□□□□ -0.89
SSBP3-206ENST00000420121 IL17RDQ8NFM7 739 aa9.52□□□□□ -0.89
SSBP3-206ENST00000420121 LIPHQ8WWY8 451 aa9.52□□□□□ -0.89
SSBP3-206ENST00000420121 SLC25A44Q96H78 314 aaPredicted RBP9.52□□□□□ -0.89
SSBP3-206ENST00000420121 FOXN4Q96NZ1 517 aa9.52□□□□□ -0.89
SSBP3-206ENST00000420121 SH3GL1Q99961 368 aa9.52□□□□□ -0.89
SSBP3-206ENST00000420121 VRK1Q99986 396 aaPredicted RBP9.52□□□□□ -0.89
SSBP3-206ENST00000420121 ECSITQ9BQ95 431 aa9.52□□□□□ -0.89
SSBP3-206ENST00000420121 MRPL13Q9BYD1 178 aaKnown RBP9.52□□□□□ -0.89
SSBP3-206ENST00000420121 TMEM38BQ9NVV0 291 aa9.52□□□□□ -0.89
SSBP3-206ENST00000420121 CMTM6Q9NX76 183 aa9.52□□□□□ -0.89
SSBP3-206ENST00000420121 RIMS3Q9UJD0 308 aa9.52□□□□□ -0.89
SSBP3-206ENST00000420121 POFUT2Q9Y2G5 429 aa9.52□□□□□ -0.89
SSBP3-206ENST00000420121 FKBP7Q9Y680 259 aa9.52□□□□□ -0.89
SSBP3-206ENST00000420121 LOC390937A0A1W2PQ73 354 aa9.51□□□□□ -0.89
SSBP3-206ENST00000420121 DHHO43323 396 aa9.51□□□□□ -0.89
SSBP3-206ENST00000420121 RNF13O43567 381 aa9.51□□□□□ -0.89
SSBP3-206ENST00000420121 OR7A10O76100 309 aa9.51□□□□□ -0.89
SSBP3-206ENST00000420121 OR5F1O95221 314 aa9.51□□□□□ -0.89
SSBP3-206ENST00000420121 OR6A2O95222 327 aa9.51□□□□□ -0.89
SSBP3-206ENST00000420121 ZNF16P17020 682 aaPredicted RBP9.51□□□□□ -0.89
SSBP3-206ENST00000420121 USF1P22415 310 aaPredicted RBP9.51□□□□□ -0.89
SSBP3-206ENST00000420121 KDELR2P33947 212 aa9.51□□□□□ -0.89
SSBP3-206ENST00000420121 RBM34P42696 430 aaKnown RBP9.51□□□□□ -0.89
SSBP3-206ENST00000420121 PTDSS1P48651 473 aaKnown RBP9.51□□□□□ -0.89
SSBP3-206ENST00000420121 ZNF133P52736 654 aaPredicted RBP9.51□□□□□ -0.89
SSBP3-206ENST00000420121 RAB1AP62820 205 aa9.51□□□□□ -0.89
SSBP3-206ENST00000420121 RAB39AQ14964 217 aa9.51□□□□□ -0.89
SSBP3-206ENST00000420121 MAPRE2Q15555 327 aa9.51□□□□□ -0.89
SSBP3-206ENST00000420121 MMEL1Q495T6 779 aa9.51□□□□□ -0.89
SSBP3-206ENST00000420121 CYBRD1Q53TN4 286 aa9.51□□□□□ -0.89
SSBP3-206ENST00000420121 C8orf82Q6P1X6 216 aaPredicted RBP9.51□□□□□ -0.89
SSBP3-206ENST00000420121 DEF8Q6ZN54 512 aa9.51□□□□□ -0.89
SSBP3-206ENST00000420121 PIWIL3Q7Z3Z3 882 aaKnown RBP9.51□□□□□ -0.89
SSBP3-206ENST00000420121 SPATA21Q7Z572 469 aa9.51□□□□□ -0.89
SSBP3-206ENST00000420121 NANOGNBQ7Z5D8 188 aa9.51□□□□□ -0.89
SSBP3-206ENST00000420121 MICU2Q8IYU8 434 aa9.51□□□□□ -0.89
SSBP3-206ENST00000420121 SLC22A24Q8N4F4 322 aa9.51□□□□□ -0.89
SSBP3-206ENST00000420121 POU5F2Q8N7G0 328 aa9.51□□□□□ -0.89
SSBP3-206ENST00000420121 MOSPD2Q8NHP6 518 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms