RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 MDP1Q86V88 176 aa13.32□□□□□ -0.28
NUP50-204ENST00000417702 IL17RDQ8NFM7 739 aa13.32□□□□□ -0.28
NUP50-204ENST00000417702 BCAS4Q8TDM0 211 aa13.32□□□□□ -0.28
NUP50-204ENST00000417702 GEMIN6Q8WXD5 167 aaKnown RBP13.32□□□□□ -0.28
NUP50-204ENST00000417702 TMEM54Q969K7 222 aa13.32□□□□□ -0.28
NUP50-204ENST00000417702 FBXO17Q96EF6 278 aa13.32□□□□□ -0.28
NUP50-204ENST00000417702 KCTD14Q9BQ13 255 aaPredicted RBP13.32□□□□□ -0.28
NUP50-204ENST00000417702 FNDC11Q9BVV2 318 aa13.32□□□□□ -0.28
NUP50-204ENST00000417702 CA10Q9NS85 328 aa13.32□□□□□ -0.28
NUP50-204ENST00000417702 C20orf141Q9NUB4 165 aa13.32□□□□□ -0.28
NUP50-204ENST00000417702 GMPR2Q9P2T1 348 aaKnown RBP13.32□□□□□ -0.28
NUP50-204ENST00000417702 TAGLN3Q9UI15 199 aa13.32□□□□□ -0.28
NUP50-204ENST00000417702 ZFHX3Q15911 3703 aa13.31□□□□□ -0.28
NUP50-204ENST00000417702 HTR3EA5X5Y0 456 aa13.31□□□□□ -0.28
NUP50-204ENST00000417702 MCIDASD6RGH6 385 aa13.31□□□□□ -0.28
NUP50-204ENST00000417702 RNF223E7ERA6 249 aa13.31□□□□□ -0.28
NUP50-204ENST00000417702 H7C417 338 aa13.31□□□□□ -0.28
NUP50-204ENST00000417702 IGHG1P01857 330 aa13.31□□□□□ -0.28
NUP50-204ENST00000417702 HLA-HP01893 362 aa13.31□□□□□ -0.28
NUP50-204ENST00000417702 CELA3BP08861 270 aa13.31□□□□□ -0.28
NUP50-204ENST00000417702 B4GALT1P15291 398 aa13.31□□□□□ -0.28
NUP50-204ENST00000417702 SERPINF1P36955 418 aa13.31□□□□□ -0.28
NUP50-204ENST00000417702 DAP3P51398 398 aaKnown RBP13.31□□□□□ -0.28
NUP50-204ENST00000417702 PSME3P61289 254 aa13.31□□□□□ -0.28
NUP50-204ENST00000417702 SNRPD2P62316 118 aaKnown RBP13.31□□□□□ -0.28
NUP50-204ENST00000417702 RPL18Q07020 188 aaKnown RBP13.31□□□□□ -0.28
NUP50-204ENST00000417702 GSG1Q2KHT4 349 aa13.31□□□□□ -0.28
NUP50-204ENST00000417702 IFI44LQ53G44 452 aa13.31□□□□□ -0.28
NUP50-204ENST00000417702 VHLLQ6RSH7 139 aa13.31□□□□□ -0.28
NUP50-204ENST00000417702 ZNF627Q7L945 461 aa13.31□□□□□ -0.28
NUP50-204ENST00000417702 VTCN1Q7Z7D3 282 aa13.31□□□□□ -0.28
NUP50-204ENST00000417702 WDFY1Q8IWB7 410 aa13.31□□□□□ -0.28
NUP50-204ENST00000417702 LIPHQ8WWY8 451 aa13.31□□□□□ -0.28
NUP50-204ENST00000417702 FAM162AQ96A26 154 aa13.31□□□□□ -0.28
NUP50-204ENST00000417702 RHNO1Q9BSD3 238 aa13.31□□□□□ -0.28
NUP50-204ENST00000417702 REG4Q9BYZ8 158 aa13.31□□□□□ -0.28
NUP50-204ENST00000417702 SEC61A2Q9H9S3 476 aa13.31□□□□□ -0.28
NUP50-204ENST00000417702 INIPQ9NRY2 104 aa13.31□□□□□ -0.28
NUP50-204ENST00000417702 A4GNTQ9UNA3 340 aa13.31□□□□□ -0.28
NUP50-204ENST00000417702 ZNF503-AS2A6NEH8 195 aa13.3□□□□□ -0.28
NUP50-204ENST00000417702 PDE5AO76074 875 aa13.3□□□□□ -0.28
NUP50-204ENST00000417702 SERPINA1P01009 418 aa13.3□□□□□ -0.28
NUP50-204ENST00000417702 F13BP05160 661 aa13.3□□□□□ -0.28
NUP50-204ENST00000417702 CALCRP30988 508 aa13.3□□□□□ -0.28
NUP50-204ENST00000417702 AQP2P41181 271 aa13.3□□□□□ -0.28
NUP50-204ENST00000417702 YAP1P46937 504 aaKnown RBP13.3□□□□□ -0.28
NUP50-204ENST00000417702 MNAT1P51948 309 aa13.3□□□□□ -0.28
NUP50-204ENST00000417702 CLRN1P58418 232 aa13.3□□□□□ -0.28
NUP50-204ENST00000417702 DSCR9P59020 149 aa13.3□□□□□ -0.28
NUP50-204ENST00000417702 PIGFQ07326 219 aa13.3□□□□□ -0.28
NUP50-204ENST00000417702 KRT72Q14CN4 511 aa13.3□□□□□ -0.28
NUP50-204ENST00000417702 CLEC2AQ6UVW9 174 aa13.3□□□□□ -0.28
NUP50-204ENST00000417702 CBLL1Q75N03 491 aa13.3□□□□□ -0.28
NUP50-204ENST00000417702 PIWIL3Q7Z3Z3 882 aaKnown RBP13.3□□□□□ -0.28
NUP50-204ENST00000417702 OFCC1Q8IZS5 231 aa13.3□□□□□ -0.28
NUP50-204ENST00000417702 FITM2Q8N6M3 262 aa13.3□□□□□ -0.28
NUP50-204ENST00000417702 NUP37Q8NFH4 326 aa13.3□□□□□ -0.28
NUP50-204ENST00000417702 POM121Q96HA1 1249 aa13.3□□□□□ -0.28
NUP50-204ENST00000417702 DENND2DQ9H6A0 471 aaPredicted RBP13.3□□□□□ -0.28
NUP50-204ENST00000417702 SPAG4Q9NPE6 437 aa13.3□□□□□ -0.28
NUP50-204ENST00000417702 ARL8BQ9NVJ2 186 aa13.3□□□□□ -0.28
NUP50-204ENST00000417702 B3GNT2Q9NY97 397 aa13.3□□□□□ -0.28
NUP50-204ENST00000417702 STX18Q9P2W9 335 aaKnown RBP13.3□□□□□ -0.28
NUP50-204ENST00000417702 ABCD2Q9UBJ2 740 aa13.3□□□□□ -0.28
NUP50-204ENST00000417702 ABCA1O95477 2261 aa13.3□□□□□ -0.28
NUP50-204ENST00000417702 IGHV2OR16-5A0A0B4J2B6 119 aa13.29□□□□□ -0.28
NUP50-204ENST00000417702 CENPBD1B2RD01 187 aa13.29□□□□□ -0.28
NUP50-204ENST00000417702 B9A039 149 aa13.29□□□□□ -0.28
NUP50-204ENST00000417702 DHHO43323 396 aa13.29□□□□□ -0.28
NUP50-204ENST00000417702 GMNNO75496 209 aa13.29□□□□□ -0.28
NUP50-204ENST00000417702 UBL3O95164 117 aa13.29□□□□□ -0.28
NUP50-204ENST00000417702 FARS2O95363 451 aaKnown RBP13.29□□□□□ -0.28
NUP50-204ENST00000417702 RAB36O95755 333 aa13.29□□□□□ -0.28
NUP50-204ENST00000417702 QDPRP09417 244 aa13.29□□□□□ -0.28
NUP50-204ENST00000417702 OR4A8P0C604 315 aa13.29□□□□□ -0.28
NUP50-204ENST00000417702 PGA4P0DJD7 388 aa13.29□□□□□ -0.28
NUP50-204ENST00000417702 PGA3P0DJD8 388 aa13.29□□□□□ -0.28
NUP50-204ENST00000417702 OR8G3PP0DMU2 310 aa13.29□□□□□ -0.28
NUP50-204ENST00000417702 IFI30P13284 250 aa13.29□□□□□ -0.28
NUP50-204ENST00000417702 EFNA4P52798 201 aa13.29□□□□□ -0.28
NUP50-204ENST00000417702 TRAM2Q15035 370 aa13.29□□□□□ -0.28
NUP50-204ENST00000417702 SWI5Q1ZZU3 235 aa13.29□□□□□ -0.28
NUP50-204ENST00000417702 LRFN4Q6PJG9 635 aa13.29□□□□□ -0.28
NUP50-204ENST00000417702 DNM1P46Q6ZS02 220 aa13.29□□□□□ -0.28
NUP50-204ENST00000417702 MYPOPQ86VE0 399 aaPredicted RBP13.29□□□□□ -0.28
NUP50-204ENST00000417702 CYP4Z1Q86W10 505 aa13.29□□□□□ -0.28
NUP50-204ENST00000417702 BPIFA2Q96DR5 249 aa13.29□□□□□ -0.28
NUP50-204ENST00000417702 HSH2DQ96JZ2 352 aa13.29□□□□□ -0.28
NUP50-204ENST00000417702 ZNF442Q9H7R0 627 aa13.29□□□□□ -0.28
NUP50-204ENST00000417702 NDE1Q9NXR1 346 aa13.29□□□□□ -0.28
NUP50-204ENST00000417702 ADA2Q9NZK5 511 aa13.29□□□□□ -0.28
NUP50-204ENST00000417702 RHCGQ9UBD6 479 aa13.29□□□□□ -0.28
NUP50-204ENST00000417702 RPS6KA6Q9UK32 745 aa13.29□□□□□ -0.28
NUP50-204ENST00000417702 FBXL3Q9UKT7 428 aa13.29□□□□□ -0.28
NUP50-204ENST00000417702 SNX13Q9Y5W8 968 aa13.29□□□□□ -0.28
NUP50-204ENST00000417702 ARFGEF3Q5TH69 2177 aa13.29□□□□□ -0.28
NUP50-204ENST00000417702 FN1P02751 2386 aaKnown RBP13.28□□□□□ -0.28
NUP50-204ENST00000417702 PIP5K1CO60331 668 aa13.28□□□□□ -0.28
NUP50-204ENST00000417702 NCK1P16333 377 aa13.28□□□□□ -0.28
NUP50-204ENST00000417702 HOXB4P17483 251 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms