RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 PQLC3Q8N755 202 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 RASGEF1AQ8N9B8 481 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 UXS1Q8NBZ7 420 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 SETD9Q8NE22 299 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 DUSP18Q8NEJ0 188 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 BBS1Q8NFJ9 593 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 OR11G2Q8NGC1 345 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 PROKR1Q8TCW9 393 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 TFB1MQ8WVM0 346 aaKnown RBP4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 RAD54LQ92698 747 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 RNASE6Q93091 150 aaKnown RBP4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 POP5Q969H6 163 aaKnown RBP4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 L3HYPDHQ96EM0 354 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 FAM210BQ96KR6 192 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 COQ10AQ96MF6 247 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 HIST1H2AAQ96QV6 131 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 KCNA7Q96RP8 456 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 HBEGFQ99075 208 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 CITED2Q99967 270 aaPredicted RBP4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 ZNF2Q9BSG1 426 aaPredicted RBP4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 ERVK-6Q9BXR3 956 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 UGT2B28Q9BY64 529 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 DCSTAMPQ9H295 470 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 ELOVL6Q9H5J4 265 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 UBTD1Q9HAC8 227 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 ZNF160Q9HCG1 818 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 TMEM184CQ9NVA4 438 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 B4GALT7Q9UBV7 327 aa4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 WARS2Q9UGM6 360 aaKnown RBP4.93□□□□□ -1.62
ECHDC1-206ENST00000417628 GLYATL1P3A0A0U1RQE8 302 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 TMEM89A2RUT3 159 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 C7orf66A4D0T2 115 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 BTBD17A6NE02 478 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 FAM90A18PA6NE21 464 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 FAM90A16PA6NEW6 464 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 FAM90A9PA6NNJ1 464 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 ZAR1LA6NP61 321 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 FAM90A5PA8MXJ8 464 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 B4DXG7 233 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 TRIM49D1C9J1S8 452 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 FAM157AC9JC47 383 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 E7ESA3 106 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 PTGES3LE9PB15 166 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 TEX46H3BTG2 121 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 RNASET2O00584 256 aaKnown RBP4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 MYL12BO14950 172 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 EPHB6O15197 1021 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 SURF4O15260 269 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 DLEU1O43261 78 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 TRIAP1O43715 76 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 SC5DO75845 299 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 SRP72O76094 671 aaKnown RBP4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 GADD45GO95257 159 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 HSPA4LO95757 839 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 FAM90A15PP0C7V4 464 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 FAM90A14PP0C7W9 464 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 TMIGD3P0DMS9 266 aaPredicted RBP4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 ERVK-10P10266 1014 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 HIST1H1BP16401 226 aaKnown RBP4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 NDUFB7P17568 137 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 MYL12AP19105 171 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 HNF1AP20823 631 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 NT5EP21589 574 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 RPS3P23396 243 aaKnown RBP eCLIP4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 ACADLP28330 430 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 THBS4P35443 961 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 CYP2J2P51589 502 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 PRRX1P54821 245 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 ATP5J2P56134 94 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 CLDN20P56880 219 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 ARF6P62330 175 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 BST1Q10588 318 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 PTP4A2Q12974 167 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 KLF10Q13118 480 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 NRF1Q16656 503 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 PNLIPRP3Q17RR3 467 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 BEAN1Q3B7T3 259 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 NKAIN1Q4KMZ8 207 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 BCL7AQ4VC05 210 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 VAX1Q5SQQ9 334 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 SYPL2Q5VXT5 272 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 AFTPHQ6ULP2 937 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 IL17RELQ6ZVW7 336 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 DPPA4Q7L190 304 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 IRF2BP2Q7Z5L9 587 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 NRARPQ7Z6K4 114 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 KLBQ86Z14 1044 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 CPOQ8IVL8 374 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 ARHGAP12Q8IWW6 846 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 FAM71AQ8IYT1 594 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 GCNT2Q8N0V5 402 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 C1orf52Q8N6N3 182 aaKnown RBP4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 AMER3Q8N944 861 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 TMEM178AQ8NBL3 297 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 OR2T4Q8NH00 348 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 MBD3L2Q8NHZ7 208 aaPredicted RBP4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 WDR20Q8TBZ3 569 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 METTL21AQ8WXB1 218 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 ACOT11Q8WXI4 607 aaPredicted RBP4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 PSMF1Q92530 271 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms