RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 FBXL3Q9UKT7 428 aa21.93■■□□□ 1.1
VEGFA-208ENST00000417285 ZNF503-AS2A6NEH8 195 aa21.92■■□□□ 1.1
VEGFA-208ENST00000417285 hCG_2039718K7EN88 272 aa21.92■■□□□ 1.1
VEGFA-208ENST00000417285 KPNA4O00629 521 aaPredicted RBP21.92■■□□□ 1.1
VEGFA-208ENST00000417285 ENTPD5O75356 428 aa21.92■■□□□ 1.1
VEGFA-208ENST00000417285 HLA-HP01893 362 aa21.92■■□□□ 1.1
VEGFA-208ENST00000417285 HIST1H2ABP04908 130 aa21.92■■□□□ 1.1
VEGFA-208ENST00000417285 CD79AP11912 226 aa21.92■■□□□ 1.1
VEGFA-208ENST00000417285 HIST3H2AQ7L7L0 130 aa21.92■■□□□ 1.1
VEGFA-208ENST00000417285 MYPOPQ86VE0 399 aaPredicted RBP21.92■■□□□ 1.1
VEGFA-208ENST00000417285 TSPYL5Q86VY4 417 aaPredicted RBP21.92■■□□□ 1.1
VEGFA-208ENST00000417285 ANKS4BQ8N8V4 417 aa21.92■■□□□ 1.1
VEGFA-208ENST00000417285 OR6X1Q8NH79 312 aa21.92■■□□□ 1.1
VEGFA-208ENST00000417285 C10orf82Q8WW14 230 aa21.92■■□□□ 1.1
VEGFA-208ENST00000417285 NEU4Q8WWR8 484 aaPredicted RBP21.92■■□□□ 1.1
VEGFA-208ENST00000417285 HIST1H2ACQ93077 130 aa21.92■■□□□ 1.1
VEGFA-208ENST00000417285 ZNF426Q9BUY5 554 aa21.92■■□□□ 1.1
VEGFA-208ENST00000417285 BEX2Q9BXY8 128 aa21.92■■□□□ 1.1
VEGFA-208ENST00000417285 POLR2J2Q9GZM3 115 aaKnown RBP21.92■■□□□ 1.1
VEGFA-208ENST00000417285 POLR2J3Q9H1A7 115 aaKnown RBP21.92■■□□□ 1.1
VEGFA-208ENST00000417285 FAM220BPB1ANY3 271 aa21.91■■□□□ 1.1
VEGFA-208ENST00000417285 SEC14L2O76054 403 aa21.91■■□□□ 1.1
VEGFA-208ENST00000417285 IGHV4-31P0DP07 118 aa21.91■■□□□ 1.1
VEGFA-208ENST00000417285 IFNGR1P15260 489 aa21.91■■□□□ 1.1
VEGFA-208ENST00000417285 NR4A1P22736 598 aa21.91■■□□□ 1.1
VEGFA-208ENST00000417285 CSNK1A1P48729 337 aa21.91■■□□□ 1.1
VEGFA-208ENST00000417285 BIDP55957 195 aa21.91■■□□□ 1.1
VEGFA-208ENST00000417285 TAS2R41P59536 307 aa21.91■■□□□ 1.1
VEGFA-208ENST00000417285 PIWIL3Q7Z3Z3 882 aaKnown RBP21.91■■□□□ 1.1
VEGFA-208ENST00000417285 SPATA21Q7Z572 469 aa21.91■■□□□ 1.1
VEGFA-208ENST00000417285 FOXB1Q99853 325 aa21.91■■□□□ 1.1
VEGFA-208ENST00000417285 NOX3Q9HBY0 568 aa21.91■■□□□ 1.1
VEGFA-208ENST00000417285 TAS2R5Q9NYW4 299 aa21.91■■□□□ 1.1
VEGFA-208ENST00000417285 LPAR3Q9UBY5 353 aa21.91■■□□□ 1.1
VEGFA-208ENST00000417285 CMAHPQ9Y471 501 aa21.91■■□□□ 1.1
VEGFA-208ENST00000417285 RNF13O43567 381 aa21.9■■□□□ 1.1
VEGFA-208ENST00000417285 FAM157CP0CG43 387 aa21.9■■□□□ 1.1
VEGFA-208ENST00000417285 UMPSP11172 480 aa21.9■■□□□ 1.1
VEGFA-208ENST00000417285 EVX1P49640 407 aa21.9■■□□□ 1.1
VEGFA-208ENST00000417285 GGTLC2Q14390 218 aa21.9■■□□□ 1.1
VEGFA-208ENST00000417285 CARTPTQ16568 116 aa21.9■■□□□ 1.1
VEGFA-208ENST00000417285 DEF8Q6ZN54 512 aa21.9■■□□□ 1.1
VEGFA-208ENST00000417285 SLC35D2Q76EJ3 337 aa21.9■■□□□ 1.1
VEGFA-208ENST00000417285 OR2T12Q8NG77 320 aa21.9■■□□□ 1.1
VEGFA-208ENST00000417285 PRSS27Q9BQR3 290 aa21.9■■□□□ 1.1
VEGFA-208ENST00000417285 AP3M1Q9Y2T2 418 aa21.9■■□□□ 1.1
VEGFA-208ENST00000417285 RTTNQ86VV8 2226 aa21.9■■□□□ 1.1
VEGFA-208ENST00000417285 TMEM129A0AVI4 362 aa21.89■■□□□ 1.09
VEGFA-208ENST00000417285 UBL3O95164 117 aa21.89■■□□□ 1.09
VEGFA-208ENST00000417285 OR5F1O95221 314 aa21.89■■□□□ 1.09
VEGFA-208ENST00000417285 TNFRSF1BP20333 461 aa21.89■■□□□ 1.09
VEGFA-208ENST00000417285 RBM34P42696 430 aaKnown RBP21.89■■□□□ 1.09
VEGFA-208ENST00000417285 RAB1AP62820 205 aa21.89■■□□□ 1.09
VEGFA-208ENST00000417285 PIGFQ07326 219 aa21.89■■□□□ 1.09
VEGFA-208ENST00000417285 SNTB2Q13425 540 aaKnown RBP21.89■■□□□ 1.09
VEGFA-208ENST00000417285 SVOPLQ8N434 492 aa21.89■■□□□ 1.09
VEGFA-208ENST00000417285 RP9Q8TA86 221 aaKnown RBP21.89■■□□□ 1.09
VEGFA-208ENST00000417285 TMEM54Q969K7 222 aa21.89■■□□□ 1.09
VEGFA-208ENST00000417285 GLTPQ9NZD2 209 aa21.89■■□□□ 1.09
VEGFA-208ENST00000417285 ARMCX1Q9P291 453 aa21.89■■□□□ 1.09
VEGFA-208ENST00000417285 LMX1BO60663 402 aa21.88■■□□□ 1.09
VEGFA-208ENST00000417285 RAB36O95755 333 aa21.88■■□□□ 1.09
VEGFA-208ENST00000417285 ASAH2BP0C7U1 165 aa21.88■■□□□ 1.09
VEGFA-208ENST00000417285 ZNF35P13682 527 aa21.88■■□□□ 1.09
VEGFA-208ENST00000417285 B4GALT1P15291 398 aa21.88■■□□□ 1.09
VEGFA-208ENST00000417285 ZNF14P17017 642 aaPredicted RBP21.88■■□□□ 1.09
VEGFA-208ENST00000417285 KDELR2P33947 212 aa21.88■■□□□ 1.09
VEGFA-208ENST00000417285 MDH1P40925 334 aaKnown RBP21.88■■□□□ 1.09
VEGFA-208ENST00000417285 IQCCQ4KMZ1 466 aa21.88■■□□□ 1.09
VEGFA-208ENST00000417285 LRRC23Q53EV4 343 aaPredicted RBP21.88■■□□□ 1.09
VEGFA-208ENST00000417285 NANOGNBQ7Z5D8 188 aa21.88■■□□□ 1.09
VEGFA-208ENST00000417285 ARPINQ7Z6K5 226 aa21.88■■□□□ 1.09
VEGFA-208ENST00000417285 WDFY1Q8IWB7 410 aa21.88■■□□□ 1.09
VEGFA-208ENST00000417285 LRRC17Q8N6Y2 441 aa21.88■■□□□ 1.09
VEGFA-208ENST00000417285 ZNF566Q969W8 418 aa21.88■■□□□ 1.09
VEGFA-208ENST00000417285 RCN3Q96D15 328 aa21.88■■□□□ 1.09
VEGFA-208ENST00000417285 SLC25A44Q96H78 314 aaPredicted RBP21.88■■□□□ 1.09
VEGFA-208ENST00000417285 ZNF75AQ96N20 296 aa21.88■■□□□ 1.09
VEGFA-208ENST00000417285 MEPEQ9NQ76 525 aaPredicted RBP21.88■■□□□ 1.09
VEGFA-208ENST00000417285 ELOVL7A1L3X0 281 aa21.87■■□□□ 1.09
VEGFA-208ENST00000417285 MT-ND1P03886 318 aa21.87■■□□□ 1.09
VEGFA-208ENST00000417285 APEHP13798 732 aaKnown RBP21.87■■□□□ 1.09
VEGFA-208ENST00000417285 DAOP14920 347 aa21.87■■□□□ 1.09
VEGFA-208ENST00000417285 GIFP27352 417 aa21.87■■□□□ 1.09
VEGFA-208ENST00000417285 PTDSS1P48651 473 aaKnown RBP21.87■■□□□ 1.09
VEGFA-208ENST00000417285 CYBRD1Q53TN4 286 aa21.87■■□□□ 1.09
VEGFA-208ENST00000417285 KRT80Q6KB66 452 aa21.87■■□□□ 1.09
VEGFA-208ENST00000417285 MICU2Q8IYU8 434 aa21.87■■□□□ 1.09
VEGFA-208ENST00000417285 POU5F2Q8N7G0 328 aa21.87■■□□□ 1.09
VEGFA-208ENST00000417285 SHARPINQ9H0F6 387 aa21.87■■□□□ 1.09
VEGFA-208ENST00000417285 DYNLRB1Q9NP97 96 aa21.87■■□□□ 1.09
VEGFA-208ENST00000417285 RIMS3Q9UJD0 308 aa21.87■■□□□ 1.09
VEGFA-208ENST00000417285 SH3PXD2BA1X283 911 aa21.86■■□□□ 1.09
VEGFA-208ENST00000417285 CCDC22O60826 627 aa21.86■■□□□ 1.09
VEGFA-208ENST00000417285 SHOX2O60902 331 aaPredicted RBP21.86■■□□□ 1.09
VEGFA-208ENST00000417285 STAMBPO95630 424 aa21.86■■□□□ 1.09
VEGFA-208ENST00000417285 OR8G3PP0DMU2 310 aa21.86■■□□□ 1.09
VEGFA-208ENST00000417285 THRBP10828 461 aa21.86■■□□□ 1.09
VEGFA-208ENST00000417285 ZNF23P17027 643 aa21.86■■□□□ 1.09
VEGFA-208ENST00000417285 LSP1P33241 339 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms