RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 STK35Q8TDR2 534 aa13.94□□□□□ -0.18
SHMT2-202ENST00000414700 TM9SF4Q92544 642 aa13.94□□□□□ -0.18
SHMT2-202ENST00000414700 HRASLS5Q96KN8 279 aa13.94□□□□□ -0.18
SHMT2-202ENST00000414700 PIGQQ9BRB3 760 aa13.94□□□□□ -0.18
SHMT2-202ENST00000414700 CENPOQ9BU64 300 aa13.94□□□□□ -0.18
SHMT2-202ENST00000414700 TSPAN10Q9H1Z9 355 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-202ENST00000414700 SLC6A15Q9H2J7 730 aa13.94□□□□□ -0.18
SHMT2-202ENST00000414700 RNF167Q9H6Y7 350 aa13.94□□□□□ -0.18
SHMT2-202ENST00000414700 ZNF71Q9NQZ8 489 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-202ENST00000414700 B4GALT7Q9UBV7 327 aa13.94□□□□□ -0.18
SHMT2-202ENST00000414700 LIPGQ9Y5X9 500 aa13.94□□□□□ -0.18
SHMT2-202ENST00000414700 KIAA1549Q9HCM3 1950 aa13.93□□□□□ -0.18
SHMT2-202ENST00000414700 FTCDNL1E5RQL4 147 aa13.93□□□□□ -0.18
SHMT2-202ENST00000414700 IGF2P01344 180 aa13.93□□□□□ -0.18
SHMT2-202ENST00000414700 HPNP05981 417 aa13.93□□□□□ -0.18
SHMT2-202ENST00000414700 ZNF17P17021 662 aa13.93□□□□□ -0.18
SHMT2-202ENST00000414700 GFRA1P56159 465 aa13.93□□□□□ -0.18
SHMT2-202ENST00000414700 ZNF169Q14929 603 aaPredicted RBP13.93□□□□□ -0.18
SHMT2-202ENST00000414700 LINC00303Q3SY05 128 aa13.93□□□□□ -0.18
SHMT2-202ENST00000414700 GLYR1Q49A26 553 aaPredicted RBP13.93□□□□□ -0.18
SHMT2-202ENST00000414700 ACSM5Q6NUN0 579 aa13.93□□□□□ -0.18
SHMT2-202ENST00000414700 Q6ZS92 163 aa13.93□□□□□ -0.18
SHMT2-202ENST00000414700 DEPDC4Q8N2C3 294 aa13.93□□□□□ -0.18
SHMT2-202ENST00000414700 DDIT4LQ96D03 193 aa13.93□□□□□ -0.18
SHMT2-202ENST00000414700 SFXN2Q96NB2 322 aa13.93□□□□□ -0.18
SHMT2-202ENST00000414700 OR5B2Q96R09 309 aa13.93□□□□□ -0.18
SHMT2-202ENST00000414700 CHCHD6Q9BRQ6 235 aa13.93□□□□□ -0.18
SHMT2-202ENST00000414700 SMURF1Q9HCE7 757 aa13.93□□□□□ -0.18
SHMT2-202ENST00000414700 SERINC1Q9NRX5 453 aa13.93□□□□□ -0.18
SHMT2-202ENST00000414700 FKBP14Q9NWM8 211 aa13.93□□□□□ -0.18
SHMT2-202ENST00000414700 TNFRSF10DQ9UBN6 386 aa13.93□□□□□ -0.18
SHMT2-202ENST00000414700 CDH10Q9Y6N8 788 aa13.93□□□□□ -0.18
SHMT2-202ENST00000414700 ZAR1LA6NP61 321 aa13.93□□□□□ -0.18
SHMT2-202ENST00000414700 BLOC1S5-TXNDC5H3BN57 136 aa13.93□□□□□ -0.18
SHMT2-202ENST00000414700 AHSA1O95433 338 aa13.93□□□□□ -0.18
SHMT2-202ENST00000414700 CLDN20P56880 219 aa13.93□□□□□ -0.18
SHMT2-202ENST00000414700 RPS4XP62701 263 aaKnown RBP13.93□□□□□ -0.18
SHMT2-202ENST00000414700 OR7A5Q15622 319 aa13.93□□□□□ -0.18
SHMT2-202ENST00000414700 SOWAHCQ53LP3 525 aaPredicted RBP13.93□□□□□ -0.18
SHMT2-202ENST00000414700 ZNF767PQ75MW2 155 aa13.93□□□□□ -0.18
SHMT2-202ENST00000414700 TCTE3Q8IZS6 198 aa13.93□□□□□ -0.18
SHMT2-202ENST00000414700 LSM14AQ8ND56 463 aaKnown RBP13.93□□□□□ -0.18
SHMT2-202ENST00000414700 LIPHQ8WWY8 451 aa13.93□□□□□ -0.18
SHMT2-202ENST00000414700 SNAPC3Q92966 411 aa13.93□□□□□ -0.18
SHMT2-202ENST00000414700 MARVELD3Q96A59 401 aa13.93□□□□□ -0.18
SHMT2-202ENST00000414700 FYTTD1Q96QD9 318 aaKnown RBP13.93□□□□□ -0.18
SHMT2-202ENST00000414700 TAAR6Q96RI8 345 aa13.93□□□□□ -0.18
SHMT2-202ENST00000414700 DEFB127Q9H1M4 99 aa13.93□□□□□ -0.18
SHMT2-202ENST00000414700 MRPS18CQ9Y3D5 142 aaKnown RBP13.93□□□□□ -0.18
SHMT2-202ENST00000414700 KLK2P20151 261 aa13.92□□□□□ -0.18
SHMT2-202ENST00000414700 C21orf33P30042 268 aaPredicted RBP13.92□□□□□ -0.18
SHMT2-202ENST00000414700 TNFSF8P32971 234 aa13.92□□□□□ -0.18
SHMT2-202ENST00000414700 GIPRP48546 466 aa13.92□□□□□ -0.18
SHMT2-202ENST00000414700 SLC9A3P48764 834 aa13.92□□□□□ -0.18
SHMT2-202ENST00000414700 RGS6P49758 472 aa13.92□□□□□ -0.18
SHMT2-202ENST00000414700 GINS1Q14691 196 aa13.92□□□□□ -0.18
SHMT2-202ENST00000414700 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.92□□□□□ -0.18
SHMT2-202ENST00000414700 SMARCD3Q6STE5 483 aa13.92□□□□□ -0.18
SHMT2-202ENST00000414700 TRILQ7L0X0 811 aa13.92□□□□□ -0.18
SHMT2-202ENST00000414700 OR4Q3Q8NH05 313 aa13.92□□□□□ -0.18
SHMT2-202ENST00000414700 MOSPD2Q8NHP6 518 aa13.92□□□□□ -0.18
SHMT2-202ENST00000414700 TSSK6Q9BXA6 273 aa13.92□□□□□ -0.18
SHMT2-202ENST00000414700 SLC22A4Q9H015 551 aa13.92□□□□□ -0.18
SHMT2-202ENST00000414700 NUFIP1Q9UHK0 495 aaKnown RBP13.92□□□□□ -0.18
SHMT2-202ENST00000414700 USP24Q9UPU5 2620 aa13.92□□□□□ -0.18
SHMT2-202ENST00000414700 CCDC182A6NF36 153 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 LIPT2A6NK58 231 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 MCIDASD6RGH6 385 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 NOS1APO75052 506 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-202ENST00000414700 ADORA3P0DMS8 318 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 GRPRP30550 384 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 AQP2P41181 271 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 MAP2K6P52564 334 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 SUCLG1P53597 346 aaKnown RBP13.91□□□□□ -0.18
SHMT2-202ENST00000414700 CLDN15P56746 228 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 RAC1P63000 192 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 CDK5Q00535 292 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 DBPQ10586 325 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-202ENST00000414700 TIMM50Q3ZCQ8 353 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 PLEKHN1Q494U1 663 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-202ENST00000414700 ESCO2Q56NI9 601 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 KDM8Q8N371 416 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 ZNF417Q8TAU3 575 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 TEX47Q8TBZ9 253 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 ZNF587Q96SQ5 575 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-202ENST00000414700 KCNS3Q9BQ31 491 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 FKRPQ9H9S5 495 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 ENOPH1Q9UHY7 261 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 A0A0J9YW62 118 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 CLCA1A8K7I4 914 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 SEC14L5O43304 696 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 HCN1O60741 890 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 GGT2P36268 569 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 DIO1P49895 249 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 FAPQ12884 760 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 ASAH1Q13510 395 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 IRF3Q14653 427 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 C5orf46Q6UWT4 87 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 ASB18Q6ZVZ8 466 aa13.91□□□□□ -0.18
SHMT2-202ENST00000414700 ZNF367Q7RTV3 350 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms