RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 SDHAP31040 664 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 EGR3Q06889 387 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 RASGEF1BQ0VAM2 473 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 ZNF169Q14929 603 aaPredicted RBP16.03■□□□□ 0.16
SDCBP-202ENST00000413219 C4orf46Q504U0 113 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 SHISA5Q8N114 240 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 ZNF676Q8N7Q3 588 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 LRRC75AQ8NAA5 344 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 OR5T2Q8NGG2 359 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 OR14C36Q8NHC7 312 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 ZNF296Q8WUU4 475 aaPredicted RBP16.03■□□□□ 0.16
SDCBP-202ENST00000413219 FGF13Q92913 245 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 MCHR2Q969V1 340 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 TMEM106AQ96A25 262 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 FAM131CQ96AQ9 280 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 VSTM2LQ96N03 204 aa16.03■□□□□ 0.16
SDCBP-202ENST00000413219 SERINC4A6NH21 518 aa16.02■□□□□ 0.15
SDCBP-202ENST00000413219 SULT1C2O00338 296 aa16.02■□□□□ 0.15
SDCBP-202ENST00000413219 CDC40O60508 579 aaKnown RBP eCLIP16.02■□□□□ 0.15
SDCBP-202ENST00000413219 CSTAP01040 98 aa16.02■□□□□ 0.15
SDCBP-202ENST00000413219 ACTBP60709 375 aa16.02■□□□□ 0.15
SDCBP-202ENST00000413219 UBE2MP61081 183 aaKnown RBP16.02■□□□□ 0.15
SDCBP-202ENST00000413219 ACTG1P63261 375 aa16.02■□□□□ 0.15
SDCBP-202ENST00000413219 FGL1Q08830 312 aa16.02■□□□□ 0.15
SDCBP-202ENST00000413219 STEAP1BQ6NZ63 245 aa16.02■□□□□ 0.15
SDCBP-202ENST00000413219 RNF44Q7L0R7 432 aa16.02■□□□□ 0.15
SDCBP-202ENST00000413219 GPX8Q8TED1 209 aa16.02■□□□□ 0.15
SDCBP-202ENST00000413219 OR1E3Q8WZA6 343 aa16.02■□□□□ 0.15
SDCBP-202ENST00000413219 ST8SIA2Q92186 375 aa16.02■□□□□ 0.15
SDCBP-202ENST00000413219 FAM3CQ92520 227 aa16.02■□□□□ 0.15
SDCBP-202ENST00000413219 ZNF416Q9BWM5 594 aa16.02■□□□□ 0.15
SDCBP-202ENST00000413219 PCDHB16Q9NRJ7 776 aa16.02■□□□□ 0.15
SDCBP-202ENST00000413219 LAMP5Q9UJQ1 280 aa16.02■□□□□ 0.15
SDCBP-202ENST00000413219 IGKV1D-42A0A075B6H8 117 aa16.01■□□□□ 0.15
SDCBP-202ENST00000413219 TRAV18A0A075B6X5 111 aa16.01■□□□□ 0.15
SDCBP-202ENST00000413219 TRAV14DV4A0A0A6YYC5 116 aa16.01■□□□□ 0.15
SDCBP-202ENST00000413219 ABCD4O14678 606 aa16.01■□□□□ 0.15
SDCBP-202ENST00000413219 FOXS1O43638 330 aa16.01■□□□□ 0.15
SDCBP-202ENST00000413219 EIF4E2O60573 245 aaKnown RBP16.01■□□□□ 0.15
SDCBP-202ENST00000413219 CD8AP01732 235 aa16.01■□□□□ 0.15
SDCBP-202ENST00000413219 APOC3P02656 99 aa16.01■□□□□ 0.15
SDCBP-202ENST00000413219 AQP2P41181 271 aa16.01■□□□□ 0.15
SDCBP-202ENST00000413219 ADPRHP54922 357 aa16.01■□□□□ 0.15
SDCBP-202ENST00000413219 SRSF4Q08170 494 aaKnown RBP16.01■□□□□ 0.15
SDCBP-202ENST00000413219 RUNX3Q13761 415 aa16.01■□□□□ 0.15
SDCBP-202ENST00000413219 ZMYND11Q15326 602 aa16.01■□□□□ 0.15
SDCBP-202ENST00000413219 EMC4Q5J8M3 183 aa16.01■□□□□ 0.15
SDCBP-202ENST00000413219 CLVS2Q5SYC1 327 aa16.01■□□□□ 0.15
SDCBP-202ENST00000413219 C12orf45Q8N5I9 185 aaPredicted RBP16.01■□□□□ 0.15
SDCBP-202ENST00000413219 CLRN3Q8NCR9 226 aa16.01■□□□□ 0.15
SDCBP-202ENST00000413219 LSM14AQ8ND56 463 aaKnown RBP16.01■□□□□ 0.15
SDCBP-202ENST00000413219 OR51D1Q8NGF3 324 aa16.01■□□□□ 0.15
SDCBP-202ENST00000413219 BAHD1Q8TBE0 780 aaPredicted RBP16.01■□□□□ 0.15
SDCBP-202ENST00000413219 TRIM43Q96BQ3 446 aaPredicted RBP16.01■□□□□ 0.15
SDCBP-202ENST00000413219 WDR76Q9H967 626 aa16.01■□□□□ 0.15
SDCBP-202ENST00000413219 IKZF2Q9UKS7 526 aa16.01■□□□□ 0.15
SDCBP-202ENST00000413219 TMEM14AQ9Y6G1 99 aa16.01■□□□□ 0.15
SDCBP-202ENST00000413219 TICRRQ7Z2Z1 1910 aa16.01■□□□□ 0.15
SDCBP-202ENST00000413219 GRXCR1A8MXD5 290 aa16.01■□□□□ 0.15
SDCBP-202ENST00000413219 PHYHO14832 338 aa16.01■□□□□ 0.15
SDCBP-202ENST00000413219 NUPL2O15504 423 aaKnown RBP16.01■□□□□ 0.15
SDCBP-202ENST00000413219 WNT11O96014 354 aa16.01■□□□□ 0.15
SDCBP-202ENST00000413219 CD3DP04234 171 aa16.01■□□□□ 0.15
SDCBP-202ENST00000413219 PNMTP11086 282 aa16.01■□□□□ 0.15
SDCBP-202ENST00000413219 POU3F4P49335 361 aa16.01■□□□□ 0.15
SDCBP-202ENST00000413219 EFNB2P52799 333 aa16.01■□□□□ 0.15
SDCBP-202ENST00000413219 GUCA2AQ02747 115 aa16.01■□□□□ 0.15
SDCBP-202ENST00000413219 TMEM17Q86X19 198 aa16.01■□□□□ 0.15
SDCBP-202ENST00000413219 SLC25A21Q9BQT8 299 aaPredicted RBP16.01■□□□□ 0.15
SDCBP-202ENST00000413219 POTEKPQ9BYX7 375 aa16.01■□□□□ 0.15
SDCBP-202ENST00000413219 Q9N2J8 555 aa16.01■□□□□ 0.15
SDCBP-202ENST00000413219 NUP210LQ5VU65 1888 aa16■□□□□ 0.15
SDCBP-202ENST00000413219 LOC100289279A0A1B0GTE1 492 aa16■□□□□ 0.15
SDCBP-202ENST00000413219 A6NCN8 305 aa16■□□□□ 0.15
SDCBP-202ENST00000413219 OR6C74A6NCV1 312 aa16■□□□□ 0.15
SDCBP-202ENST00000413219 H0YC42 278 aa16■□□□□ 0.15
SDCBP-202ENST00000413219 SLC17A2O00624 439 aa16■□□□□ 0.15
SDCBP-202ENST00000413219 APODP05090 189 aa16■□□□□ 0.15
SDCBP-202ENST00000413219 ALOX5APP20292 161 aa16■□□□□ 0.15
SDCBP-202ENST00000413219 TAS2R19P59542 299 aa16■□□□□ 0.15
SDCBP-202ENST00000413219 DMWDQ09019 674 aa16■□□□□ 0.15
SDCBP-202ENST00000413219 ZNF345Q14585 488 aa16■□□□□ 0.15
SDCBP-202ENST00000413219 MELKQ14680 651 aa16■□□□□ 0.15
SDCBP-202ENST00000413219 RAB11BQ15907 218 aa16■□□□□ 0.15
SDCBP-202ENST00000413219 ZNF74Q16587 644 aa16■□□□□ 0.15
SDCBP-202ENST00000413219 ITPRIPL2Q3MIP1 535 aa16■□□□□ 0.15
SDCBP-202ENST00000413219 LY6G6FQ5SQ64 297 aa16■□□□□ 0.15
SDCBP-202ENST00000413219 FDX2Q6P4F2 183 aa16■□□□□ 0.15
SDCBP-202ENST00000413219 ATRAIDQ6UW56 229 aa16■□□□□ 0.15
SDCBP-202ENST00000413219 NPSR1Q6W5P4 371 aa16■□□□□ 0.15
SDCBP-202ENST00000413219 MOB3CQ70IA8 216 aa16■□□□□ 0.15
SDCBP-202ENST00000413219 ZNF546Q86UE3 836 aa16■□□□□ 0.15
SDCBP-202ENST00000413219 GABRG1Q8N1C3 465 aa16■□□□□ 0.15
SDCBP-202ENST00000413219 KCNRGQ8N5I3 272 aa16■□□□□ 0.15
SDCBP-202ENST00000413219 TMEM229BQ8NBD8 167 aa16■□□□□ 0.15
SDCBP-202ENST00000413219 RCBTB1Q8NDN9 531 aa16■□□□□ 0.15
SDCBP-202ENST00000413219 OR10K1Q8NGX5 313 aa16■□□□□ 0.15
SDCBP-202ENST00000413219 OR10G6Q8NH81 332 aa16■□□□□ 0.15
SDCBP-202ENST00000413219 DUSP19Q8WTR2 217 aa16■□□□□ 0.15
SDCBP-202ENST00000413219 DCBLD2Q96PD2 775 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms