RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 NCF4Q15080 339 aa4.04□□□□□ -1.76
LSM5-206ENST00000409987 C18orf21Q32NC0 220 aaPredicted RBP4.04□□□□□ -1.76
LSM5-206ENST00000409987 PPM1LQ5SGD2 360 aa4.04□□□□□ -1.76
LSM5-206ENST00000409987 ZNF57Q68EA5 555 aaPredicted RBP4.04□□□□□ -1.76
LSM5-206ENST00000409987 OR52E8Q6IFG1 317 aa4.04□□□□□ -1.76
LSM5-206ENST00000409987 ARMCX5Q6P1M9 558 aa4.04□□□□□ -1.76
LSM5-206ENST00000409987 ASCL5Q7RTU5 278 aa4.04□□□□□ -1.76
LSM5-206ENST00000409987 FAM122BQ7Z309 247 aa4.04□□□□□ -1.76
LSM5-206ENST00000409987 ZNF100Q8IYN0 542 aa4.04□□□□□ -1.76
LSM5-206ENST00000409987 ARHGAP18Q8N392 663 aa4.04□□□□□ -1.76
LSM5-206ENST00000409987 ITFG2Q969R8 447 aa4.04□□□□□ -1.76
LSM5-206ENST00000409987 MRGPRFQ96AM1 343 aa4.04□□□□□ -1.76
LSM5-206ENST00000409987 ZNF317Q96PQ6 595 aaPredicted RBP4.04□□□□□ -1.76
LSM5-206ENST00000409987 CYP2S1Q96SQ9 504 aa4.04□□□□□ -1.76
LSM5-206ENST00000409987 UCK2Q9BZX2 261 aa4.04□□□□□ -1.76
LSM5-206ENST00000409987 ZC4H2Q9NQZ6 224 aa4.04□□□□□ -1.76
LSM5-206ENST00000409987 PAK5Q9P286 719 aa4.04□□□□□ -1.76
LSM5-206ENST00000409987 WARS2Q9UGM6 360 aaKnown RBP4.04□□□□□ -1.76
LSM5-206ENST00000409987 SAMD4AQ9UPU9 718 aaKnown RBP4.04□□□□□ -1.76
LSM5-206ENST00000409987 SLC17A4Q9Y2C5 497 aa4.04□□□□□ -1.76
LSM5-206ENST00000409987 SAR1BQ9Y6B6 198 aa4.04□□□□□ -1.76
LSM5-206ENST00000409987 STYXL1Q9Y6J8 313 aa4.04□□□□□ -1.76
LSM5-206ENST00000409987 RGS12O14924 1447 aa4.04□□□□□ -1.76
LSM5-206ENST00000409987 USP6P35125 1406 aa4.04□□□□□ -1.76
LSM5-206ENST00000409987 LRP5O75197 1615 aa4.03□□□□□ -1.76
LSM5-206ENST00000409987 LRP6O75581 1613 aa4.03□□□□□ -1.76
LSM5-206ENST00000409987 SOX15O60248 233 aa4.03□□□□□ -1.76
LSM5-206ENST00000409987 HSBP1O75506 76 aa4.03□□□□□ -1.76
LSM5-206ENST00000409987 SMC2O95347 1197 aa4.03□□□□□ -1.76
LSM5-206ENST00000409987 FARS2O95363 451 aaKnown RBP4.03□□□□□ -1.76
LSM5-206ENST00000409987 ETHE1O95571 254 aa4.03□□□□□ -1.76
LSM5-206ENST00000409987 RENP00797 406 aa4.03□□□□□ -1.76
LSM5-206ENST00000409987 IGHV3-13P01766 116 aa4.03□□□□□ -1.76
LSM5-206ENST00000409987 HOXD4P09016 255 aaPredicted RBP4.03□□□□□ -1.76
LSM5-206ENST00000409987 DDOSTP39656 456 aa4.03□□□□□ -1.76
LSM5-206ENST00000409987 VEGFCP49767 419 aa4.03□□□□□ -1.76
LSM5-206ENST00000409987 LIM2P55344 173 aa4.03□□□□□ -1.76
LSM5-206ENST00000409987 ATP5J2P56134 94 aa4.03□□□□□ -1.76
LSM5-206ENST00000409987 PSG3Q16557 428 aa4.03□□□□□ -1.76
LSM5-206ENST00000409987 C17orf58Q2M2W7 97 aa4.03□□□□□ -1.76
LSM5-206ENST00000409987 VWA2Q5GFL6 755 aa4.03□□□□□ -1.76
LSM5-206ENST00000409987 SOHLH1Q5JUK2 328 aa4.03□□□□□ -1.76
LSM5-206ENST00000409987 ZNF506Q5JVG8 444 aa4.03□□□□□ -1.76
LSM5-206ENST00000409987 LEMD1Q68G75 181 aa4.03□□□□□ -1.76
LSM5-206ENST00000409987 ZNF836Q6ZNA1 936 aa4.03□□□□□ -1.76
LSM5-206ENST00000409987 TRMT10CQ7L0Y3 403 aaKnown RBP4.03□□□□□ -1.76
LSM5-206ENST00000409987 APOBEC3FQ8IUX4 373 aaKnown RBP4.03□□□□□ -1.76
LSM5-206ENST00000409987 LRRC49Q8IUZ0 686 aa4.03□□□□□ -1.76
LSM5-206ENST00000409987 SLC39A11Q8N1S5 342 aa4.03□□□□□ -1.76
LSM5-206ENST00000409987 CSNK1G2-AS1Q8NCQ2 148 aa4.03□□□□□ -1.76
LSM5-206ENST00000409987 BEST4Q8NFU0 473 aa4.03□□□□□ -1.76
LSM5-206ENST00000409987 CAPSLQ8WWF8 208 aa4.03□□□□□ -1.76
LSM5-206ENST00000409987 CRYGNQ8WXF5 182 aa4.03□□□□□ -1.76
LSM5-206ENST00000409987 MYDGFQ969H8 173 aa4.03□□□□□ -1.76
LSM5-206ENST00000409987 OXGR1Q96P68 337 aa4.03□□□□□ -1.76
LSM5-206ENST00000409987 TSSK3Q96PN8 268 aa4.03□□□□□ -1.76
LSM5-206ENST00000409987 ECSITQ9BQ95 431 aa4.03□□□□□ -1.76
LSM5-206ENST00000409987 SOSTQ9BQB4 213 aa4.03□□□□□ -1.76
LSM5-206ENST00000409987 ACTR3CQ9C0K3 210 aaPredicted RBP4.03□□□□□ -1.76
LSM5-206ENST00000409987 NTN4Q9HB63 628 aa4.03□□□□□ -1.76
LSM5-206ENST00000409987 MRPL47Q9HD33 250 aaKnown RBP4.03□□□□□ -1.76
LSM5-206ENST00000409987 FGF20Q9NP95 211 aaPredicted RBP4.03□□□□□ -1.76
LSM5-206ENST00000409987 DMAP1Q9NPF5 467 aaPredicted RBP4.03□□□□□ -1.76
LSM5-206ENST00000409987 ABCC13Q9NSE7 274 aa4.03□□□□□ -1.76
LSM5-206ENST00000409987 PAK1IP1Q9NWT1 392 aaPredicted RBP4.03□□□□□ -1.76
LSM5-206ENST00000409987 THUMPD1Q9NXG2 353 aaKnown RBP4.03□□□□□ -1.76
LSM5-206ENST00000409987 UXTQ9UBK9 157 aaPredicted RBP4.03□□□□□ -1.76
LSM5-206ENST00000409987 ZNF229Q9UJW7 825 aa4.03□□□□□ -1.76
LSM5-206ENST00000409987 GGA2Q9UJY4 613 aa4.03□□□□□ -1.76
LSM5-206ENST00000409987 LSM7Q9UK45 103 aaKnown RBP4.03□□□□□ -1.76
LSM5-206ENST00000409987 RPL36Q9Y3U8 105 aaKnown RBP4.03□□□□□ -1.76
LSM5-206ENST00000409987 FGD6Q6ZV73 1430 aa4.03□□□□□ -1.76
LSM5-206ENST00000409987 DNMT1P26358 1616 aaKnown RBP4.03□□□□□ -1.77
LSM5-206ENST00000409987 PLEKHH1Q9ULM0 1364 aa4.02□□□□□ -1.77
LSM5-206ENST00000409987 KDM5CP41229 1560 aa4.02□□□□□ -1.77
LSM5-206ENST00000409987 MYO3BQ8WXR4 1341 aa4.02□□□□□ -1.77
LSM5-206ENST00000409987 CDK13Q14004 1512 aaKnown RBP4.02□□□□□ -1.77
LSM5-206ENST00000409987 KDM5DQ9BY66 1539 aa4.02□□□□□ -1.77
LSM5-206ENST00000409987 PRSS37A4D1T9 235 aa4.02□□□□□ -1.77
LSM5-206ENST00000409987 TRABD2BA6NFA1 517 aa4.02□□□□□ -1.77
LSM5-206ENST00000409987 B4DXG7 233 aa4.02□□□□□ -1.77
LSM5-206ENST00000409987 SULT2B1O00204 365 aa4.02□□□□□ -1.77
LSM5-206ENST00000409987 EIF4E2O60573 245 aaKnown RBP4.02□□□□□ -1.77
LSM5-206ENST00000409987 GAS8-AS1O95177 125 aa4.02□□□□□ -1.77
LSM5-206ENST00000409987 C2P06681 752 aa4.02□□□□□ -1.77
LSM5-206ENST00000409987 MELTFP08582 738 aa4.02□□□□□ -1.77
LSM5-206ENST00000409987 NR2C1P13056 603 aa4.02□□□□□ -1.77
LSM5-206ENST00000409987 PVRP15151 417 aa4.02□□□□□ -1.77
LSM5-206ENST00000409987 FASP25445 335 aa4.02□□□□□ -1.77
LSM5-206ENST00000409987 GABRR2P28476 465 aa4.02□□□□□ -1.77
LSM5-206ENST00000409987 UGT1A3P35503 534 aa4.02□□□□□ -1.77
LSM5-206ENST00000409987 ACVR1BP36896 505 aa4.02□□□□□ -1.77
LSM5-206ENST00000409987 PTGDSP41222 190 aa4.02□□□□□ -1.77
LSM5-206ENST00000409987 TNFSF9P41273 254 aa4.02□□□□□ -1.77
LSM5-206ENST00000409987 CSRP3P50461 194 aa4.02□□□□□ -1.77
LSM5-206ENST00000409987 ARHGDIAP52565 204 aa4.02□□□□□ -1.77
LSM5-206ENST00000409987 EFNA3P52797 238 aa4.02□□□□□ -1.77
LSM5-206ENST00000409987 FBXW4P57775 412 aa4.02□□□□□ -1.77
LSM5-206ENST00000409987 PAX2Q02962 417 aa4.02□□□□□ -1.77
LSM5-206ENST00000409987 PUDPQ08623 228 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms