RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 ISXQ2M1V0 245 aa13.74□□□□□ -0.21
SCAMP4-202ENST00000409472 LYSMD4Q5XG99 296 aa13.74□□□□□ -0.21
SCAMP4-202ENST00000409472 LCN10Q6JVE6 187 aa13.74□□□□□ -0.21
SCAMP4-202ENST00000409472 PWWP2BQ6NUJ5 590 aa13.74□□□□□ -0.21
SCAMP4-202ENST00000409472 MZT2AQ6P582 158 aa13.74□□□□□ -0.21
SCAMP4-202ENST00000409472 OR8H3Q8N146 312 aa13.74□□□□□ -0.21
SCAMP4-202ENST00000409472 APCDD1LQ8NCL9 501 aa13.74□□□□□ -0.21
SCAMP4-202ENST00000409472 TRMT10AQ8TBZ6 339 aaKnown RBP13.74□□□□□ -0.21
SCAMP4-202ENST00000409472 TSPAN10Q9H1Z9 355 aaPredicted RBP13.74□□□□□ -0.21
SCAMP4-202ENST00000409472 WDR76Q9H967 626 aa13.74□□□□□ -0.21
SCAMP4-202ENST00000409472 APMAPQ9HDC9 416 aa13.74□□□□□ -0.21
SCAMP4-202ENST00000409472 TAS2R5Q9NYW4 299 aa13.74□□□□□ -0.21
SCAMP4-202ENST00000409472 H3BSH0 61 aa13.74□□□□□ -0.21
SCAMP4-202ENST00000409472 PIN1P1O15428 100 aa13.74□□□□□ -0.21
SCAMP4-202ENST00000409472 AKR7A3O95154 331 aa13.74□□□□□ -0.21
SCAMP4-202ENST00000409472 SDHBP21912 280 aa13.74□□□□□ -0.21
SCAMP4-202ENST00000409472 FBXW4P57775 412 aa13.74□□□□□ -0.21
SCAMP4-202ENST00000409472 RNF4P78317 190 aa13.74□□□□□ -0.21
SCAMP4-202ENST00000409472 SLC35D3Q5M8T2 416 aa13.74□□□□□ -0.21
SCAMP4-202ENST00000409472 ZNF684Q5T5D7 378 aa13.74□□□□□ -0.21
SCAMP4-202ENST00000409472 BICRALQ6AI39 1079 aa13.74□□□□□ -0.21
SCAMP4-202ENST00000409472 LAMTOR1Q6IAA8 161 aa13.74□□□□□ -0.21
SCAMP4-202ENST00000409472 RHBDD2Q6NTF9 364 aa13.74□□□□□ -0.21
SCAMP4-202ENST00000409472 C7orf57Q8NEG2 295 aa13.74□□□□□ -0.21
SCAMP4-202ENST00000409472 GFI1Q99684 422 aa13.74□□□□□ -0.21
SCAMP4-202ENST00000409472 GALNT9Q9HCQ5 603 aa13.74□□□□□ -0.21
SCAMP4-202ENST00000409472 RXFP3Q9NSD7 469 aa13.74□□□□□ -0.21
SCAMP4-202ENST00000409472 GRHPRQ9UBQ7 328 aa13.74□□□□□ -0.21
SCAMP4-202ENST00000409472 MRTO4Q9UKD2 239 aaKnown RBP13.74□□□□□ -0.21
SCAMP4-202ENST00000409472 ELF5Q9UKW6 265 aaPredicted RBP13.74□□□□□ -0.21
SCAMP4-202ENST00000409472 AK6Q9Y3D8 172 aaKnown RBP13.74□□□□□ -0.21
SCAMP4-202ENST00000409472 ZNF175Q9Y473 711 aa13.74□□□□□ -0.21
SCAMP4-202ENST00000409472 FAM25EA8MYX2 175 aa13.73□□□□□ -0.21
SCAMP4-202ENST00000409472 ZFPL1O95159 310 aa13.73□□□□□ -0.21
SCAMP4-202ENST00000409472 CXCR1P25024 350 aa13.73□□□□□ -0.21
SCAMP4-202ENST00000409472 DCAF7P61962 342 aa13.73□□□□□ -0.21
SCAMP4-202ENST00000409472 TMEM71Q6P5X7 295 aa13.73□□□□□ -0.21
SCAMP4-202ENST00000409472 PLET1Q6UQ28 207 aa13.73□□□□□ -0.21
SCAMP4-202ENST00000409472 COMMD7Q86VX2 200 aa13.73□□□□□ -0.21
SCAMP4-202ENST00000409472 KMT5CQ86Y97 462 aa13.73□□□□□ -0.21
SCAMP4-202ENST00000409472 TIGD4Q8IY51 512 aa13.73□□□□□ -0.21
SCAMP4-202ENST00000409472 PM20D2Q8IYS1 436 aa13.73□□□□□ -0.21
SCAMP4-202ENST00000409472 DUSP19Q8WTR2 217 aa13.73□□□□□ -0.21
SCAMP4-202ENST00000409472 GUCD1Q96NT3 240 aa13.73□□□□□ -0.21
SCAMP4-202ENST00000409472 AMELYQ99218 206 aa13.73□□□□□ -0.21
SCAMP4-202ENST00000409472 WACQ9BTA9 647 aa13.73□□□□□ -0.21
SCAMP4-202ENST00000409472 AKIRIN1Q9H9L7 192 aaPredicted RBP13.73□□□□□ -0.21
SCAMP4-202ENST00000409472 CYSLTR2Q9NS75 346 aa13.73□□□□□ -0.21
SCAMP4-202ENST00000409472 TSC22D2O75157 780 aa13.73□□□□□ -0.21
SCAMP4-202ENST00000409472 IGF2P01344 180 aa13.73□□□□□ -0.21
SCAMP4-202ENST00000409472 HOXD4P09016 255 aaPredicted RBP13.73□□□□□ -0.21
SCAMP4-202ENST00000409472 ZNF250P15622 560 aa13.73□□□□□ -0.21
SCAMP4-202ENST00000409472 RAB3BP20337 219 aa13.73□□□□□ -0.21
SCAMP4-202ENST00000409472 PER3P56645 1201 aa13.73□□□□□ -0.21
SCAMP4-202ENST00000409472 TRAM1Q15629 374 aa13.73□□□□□ -0.21
SCAMP4-202ENST00000409472 RNASE12Q5GAN4 147 aaKnown RBP13.73□□□□□ -0.21
SCAMP4-202ENST00000409472 LRRC69Q6ZNQ3 347 aa13.73□□□□□ -0.21
SCAMP4-202ENST00000409472 ANKRD37Q7Z713 158 aa13.73□□□□□ -0.21
SCAMP4-202ENST00000409472 BMPERQ8N8U9 685 aa13.73□□□□□ -0.21
SCAMP4-202ENST00000409472 MAFAQ8NHW3 353 aaPredicted RBP13.73□□□□□ -0.21
SCAMP4-202ENST00000409472 C8orf44Q96CB5 159 aa13.73□□□□□ -0.21
SCAMP4-202ENST00000409472 DERL3Q96Q80 235 aa13.73□□□□□ -0.21
SCAMP4-202ENST00000409472 CCNL2Q96S94 520 aaPredicted RBP13.73□□□□□ -0.21
SCAMP4-202ENST00000409472 ANKRD10Q9NXR5 420 aa13.73□□□□□ -0.21
SCAMP4-202ENST00000409472 MRPL39Q9NYK5 338 aaKnown RBP13.73□□□□□ -0.21
SCAMP4-202ENST00000409472 MRM2Q9UI43 246 aaKnown RBP13.73□□□□□ -0.21
SCAMP4-202ENST00000409472 ZDBF2Q9HCK1 2354 aa13.72□□□□□ -0.21
SCAMP4-202ENST00000409472 A0A1W2PQD3 144 aa13.72□□□□□ -0.21
SCAMP4-202ENST00000409472 ANKRD61A6NGH8 418 aa13.72□□□□□ -0.21
SCAMP4-202ENST00000409472 SUSD5O60279 629 aa13.72□□□□□ -0.21
SCAMP4-202ENST00000409472 SLC19A2O60779 497 aa13.72□□□□□ -0.21
SCAMP4-202ENST00000409472 TXNDC12O95881 172 aa13.72□□□□□ -0.21
SCAMP4-202ENST00000409472 ADRB1P08588 477 aa13.72□□□□□ -0.21
SCAMP4-202ENST00000409472 UCHL1P09936 223 aa13.72□□□□□ -0.21
SCAMP4-202ENST00000409472 FAM157BP0CG42 384 aa13.72□□□□□ -0.21
SCAMP4-202ENST00000409472 MAP2K3P46734 347 aa13.72□□□□□ -0.21
SCAMP4-202ENST00000409472 SLC6A8P48029 635 aa13.72□□□□□ -0.21
SCAMP4-202ENST00000409472 PNLIPRP2P54317 469 aa13.72□□□□□ -0.21
SCAMP4-202ENST00000409472 AANATQ16613 207 aa13.72□□□□□ -0.21
SCAMP4-202ENST00000409472 TATDN3Q17R31 274 aa13.72□□□□□ -0.21
SCAMP4-202ENST00000409472 STPG1Q5TH74 334 aa13.72□□□□□ -0.21
SCAMP4-202ENST00000409472 RPL22L1Q6P5R6 122 aaKnown RBP13.72□□□□□ -0.21
SCAMP4-202ENST00000409472 TEX261Q6UWH6 196 aa13.72□□□□□ -0.21
SCAMP4-202ENST00000409472 LRRC28Q86X40 367 aaPredicted RBP13.72□□□□□ -0.21
SCAMP4-202ENST00000409472 MS4A15Q8N5U1 240 aa13.72□□□□□ -0.21
SCAMP4-202ENST00000409472 SAP25Q8TEE9 199 aa13.72□□□□□ -0.21
SCAMP4-202ENST00000409472 ACOT12Q8WYK0 555 aa13.72□□□□□ -0.21
SCAMP4-202ENST00000409472 AKAP1Q92667 903 aaKnown RBP eCLIP13.72□□□□□ -0.213e-8■■■■■ 43.1
SCAMP4-202ENST00000409472 ATOH1Q92858 354 aaPredicted RBP13.72□□□□□ -0.21
SCAMP4-202ENST00000409472 UPRTQ96BW1 309 aa13.72□□□□□ -0.21
SCAMP4-202ENST00000409472 ABHD1Q96SE0 405 aa13.72□□□□□ -0.21
SCAMP4-202ENST00000409472 NOX4Q9NPH5 578 aa13.72□□□□□ -0.21
SCAMP4-202ENST00000409472 NOSIPQ9Y314 301 aaKnown RBP13.72□□□□□ -0.21
SCAMP4-202ENST00000409472 U3KQ87 197 aa13.72□□□□□ -0.21
SCAMP4-202ENST00000409472 IGHV5-10-1A0A0J9YXX1 117 aa13.72□□□□□ -0.21
SCAMP4-202ENST00000409472 AGFG1P52594 562 aaKnown RBP13.72□□□□□ -0.21
SCAMP4-202ENST00000409472 SLC25A1P53007 311 aa13.72□□□□□ -0.21
SCAMP4-202ENST00000409472 IL10RAQ13651 578 aa13.72□□□□□ -0.21
SCAMP4-202ENST00000409472 COL28A1Q2UY09 1125 aa13.72□□□□□ -0.21
SCAMP4-202ENST00000409472 NKAIN1Q4KMZ8 207 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms