RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 NDUFS1P28331 727 aa11.67□□□□□ -0.54
HERC3-203ENST00000407637 PBLDP30039 288 aaPredicted RBP11.67□□□□□ -0.54
HERC3-203ENST00000407637 FRKP42685 505 aaPredicted RBP11.67□□□□□ -0.54
HERC3-203ENST00000407637 TCEAL6Q6IPX3 200 aa11.67□□□□□ -0.54
HERC3-203ENST00000407637 STAC2Q6ZMT1 411 aa11.67□□□□□ -0.54
HERC3-203ENST00000407637 ANGPTL5Q86XS5 388 aa11.67□□□□□ -0.54
HERC3-203ENST00000407637 GALNT16Q8N428 558 aa11.67□□□□□ -0.54
HERC3-203ENST00000407637 OR56B1Q8NGI3 324 aa11.67□□□□□ -0.54
HERC3-203ENST00000407637 FOXRED1Q96CU9 486 aaPredicted RBP11.67□□□□□ -0.54
HERC3-203ENST00000407637 RRNAD1Q96FB5 475 aaKnown RBP11.67□□□□□ -0.54
HERC3-203ENST00000407637 CD180Q99467 661 aa11.67□□□□□ -0.54
HERC3-203ENST00000407637 C19orf43Q9BQ61 176 aa11.67□□□□□ -0.54
HERC3-203ENST00000407637 TUBA4BQ9H853 241 aa11.67□□□□□ -0.54
HERC3-203ENST00000407637 OR2S2Q9NQN1 319 aa11.67□□□□□ -0.54
HERC3-203ENST00000407637 GDE1Q9NZC3 331 aa11.67□□□□□ -0.54
HERC3-203ENST00000407637 ATG4BQ9Y4P1 393 aa11.67□□□□□ -0.54
HERC3-203ENST00000407637 KPTNQ9Y664 436 aa11.67□□□□□ -0.54
HERC3-203ENST00000407637 VWA8A3KMH1 1905 aa11.67□□□□□ -0.54
HERC3-203ENST00000407637 TICRRQ7Z2Z1 1910 aa11.67□□□□□ -0.54
HERC3-203ENST00000407637 SCN5AQ14524 2016 aa11.67□□□□□ -0.54
HERC3-203ENST00000407637 BCAT2O15382 392 aaPredicted RBP11.67□□□□□ -0.54
HERC3-203ENST00000407637 FBXO24O75426 580 aa11.67□□□□□ -0.54
HERC3-203ENST00000407637 HMGN2P05204 90 aaKnown RBP11.67□□□□□ -0.54
HERC3-203ENST00000407637 CTSLP07711 333 aa11.67□□□□□ -0.54
HERC3-203ENST00000407637 ACTA2P62736 377 aa11.67□□□□□ -0.54
HERC3-203ENST00000407637 ACTG2P63267 376 aa11.67□□□□□ -0.54
HERC3-203ENST00000407637 NAAAQ02083 359 aa11.67□□□□□ -0.54
HERC3-203ENST00000407637 DHCR24Q15392 516 aa11.67□□□□□ -0.54
HERC3-203ENST00000407637 OR8G1Q15617 311 aa11.67□□□□□ -0.54
HERC3-203ENST00000407637 TPRG1Q6ZUI0 275 aa11.67□□□□□ -0.54
HERC3-203ENST00000407637 TMEM173Q86WV6 379 aaPredicted RBP11.67□□□□□ -0.54
HERC3-203ENST00000407637 WDR34Q96EX3 536 aa11.67□□□□□ -0.54
HERC3-203ENST00000407637 SMIM8Q96KF7 97 aa11.67□□□□□ -0.54
HERC3-203ENST00000407637 ATG5Q9H1Y0 275 aa11.67□□□□□ -0.54
HERC3-203ENST00000407637 TRAV27A0A087WT01 109 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 A0A0G2JLL6 359 aaPredicted RBP11.66□□□□□ -0.54
HERC3-203ENST00000407637 PRAMEF26H0Y7S4 382 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 RAB3DO95716 219 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 TBX6O95947 436 aaPredicted RBP11.66□□□□□ -0.54
HERC3-203ENST00000407637 AMY2AP04746 511 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 HCKP08631 526 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 FCGR3AP08637 254 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 SOX2P48431 317 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 PSEN2P49810 448 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 SULT1A1P50225 295 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 CLDN2P57739 230 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 SCGB2B2Q4G0G5 96 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 PDZD11Q5EBL8 140 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 ALKBH2Q6NS38 261 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 NXPE4Q6UWF7 544 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 ZNF574Q6ZN55 896 aaPredicted RBP11.66□□□□□ -0.54
HERC3-203ENST00000407637 TMPPEQ6ZT21 453 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 TTLL10Q6ZVT0 673 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 PRRT2Q7Z6L0 340 aaPredicted RBP11.66□□□□□ -0.54
HERC3-203ENST00000407637 BIVMQ86UB2 503 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 APOBEC3FQ8IUX4 373 aaKnown RBP11.66□□□□□ -0.54
HERC3-203ENST00000407637 ZNF511Q8NB15 262 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 SCAMP4Q969E2 229 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 POM121Q96HA1 1249 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 POTEKPQ9BYX7 375 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 ELP3Q9H9T3 547 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 A0A0G2JN53 185 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.66□□□□□ -0.54
HERC3-203ENST00000407637 TBL1XO60907 577 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 ALOX12BO75342 701 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 F3P13726 295 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 NCBP2P52298 156 aaKnown RBP eCLIP11.66□□□□□ -0.54
HERC3-203ENST00000407637 NUTF2P61970 127 aaKnown RBP11.66□□□□□ -0.54
HERC3-203ENST00000407637 SNRPNP63162 240 aaKnown RBP11.66□□□□□ -0.54
HERC3-203ENST00000407637 ZNF585AQ6P3V2 769 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 PAPD4Q6PIY7 484 aaKnown RBP11.66□□□□□ -0.54
HERC3-203ENST00000407637 WDR88Q6ZMY6 472 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 SYS1Q8N2H4 156 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 C2orf73Q8N5S3 287 aaPredicted RBP11.66□□□□□ -0.54
HERC3-203ENST00000407637 AVL9Q8NBF6 648 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 ADAMTS17Q8TE56 1095 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 ELF4Q99607 663 aaPredicted RBP11.66□□□□□ -0.54
HERC3-203ENST00000407637 ZNF559Q9BR84 538 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 MRI1Q9BV20 369 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 GPR62Q9BZJ7 368 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 ZNF350Q9GZX5 532 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 KRCC1Q9NPI7 259 aaPredicted RBP11.66□□□□□ -0.54
HERC3-203ENST00000407637 CBY1Q9Y3M2 126 aa11.66□□□□□ -0.54
HERC3-203ENST00000407637 TMEM184BQ9Y519 407 aaPredicted RBP11.66□□□□□ -0.54
HERC3-203ENST00000407637 ZNF726A6NNF4 738 aa11.65□□□□□ -0.54
HERC3-203ENST00000407637 TMPRSS11DO60235 418 aa11.65□□□□□ -0.54
HERC3-203ENST00000407637 CTAG2O75638 210 aa11.65□□□□□ -0.54
HERC3-203ENST00000407637 SERPINA5P05154 406 aa11.65□□□□□ -0.54
HERC3-203ENST00000407637 CSN2P05814 226 aa11.65□□□□□ -0.54
HERC3-203ENST00000407637 BSGP35613 385 aa11.65□□□□□ -0.54
HERC3-203ENST00000407637 NANOS3P60323 173 aaKnown RBP11.65□□□□□ -0.54
HERC3-203ENST00000407637 LBHQ53QV2 105 aaPredicted RBP11.65□□□□□ -0.54
HERC3-203ENST00000407637 ZSCAN4Q8NAM6 433 aaPredicted RBP11.65□□□□□ -0.54
HERC3-203ENST00000407637 FGF13Q92913 245 aa11.65□□□□□ -0.54
HERC3-203ENST00000407637 AMDHD1Q96NU7 426 aa11.65□□□□□ -0.54
HERC3-203ENST00000407637 GPR174Q9BXC1 333 aa11.65□□□□□ -0.54
HERC3-203ENST00000407637 RGCCQ9H4X1 137 aa11.65□□□□□ -0.54
HERC3-203ENST00000407637 UNKLQ9H9P5 680 aaKnown RBP11.65□□□□□ -0.54
HERC3-203ENST00000407637 DOK5Q9P104 306 aa11.65□□□□□ -0.54
HERC3-203ENST00000407637 ZNF281Q9Y2X9 895 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms