RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 C9orf40Q8IXQ3 194 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 SLC38A6Q8IZM9 456 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 OR8H1Q8NGG4 311 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 ZNF519Q8TB69 540 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 TSLPQ969D9 159 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 SLC25A28Q96A46 364 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 ZNF578Q96N58 590 aaPredicted RBP8.91□□□□□ -0.98
MSH2-202ENST00000406134 DMRTA2Q96SC8 542 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 NPAS1Q99742 590 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 NARFLQ9H6Q4 476 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 SCP2D1Q9UJQ7 156 aa8.91□□□□□ -0.98
MSH2-202ENST00000406134 ARPC1BO15143 372 aaKnown RBP8.9□□□□□ -0.98
MSH2-202ENST00000406134 SRPX2O60687 465 aaPredicted RBP8.9□□□□□ -0.98
MSH2-202ENST00000406134 B3GALNT1O75752 331 aa8.9□□□□□ -0.98
MSH2-202ENST00000406134 ITGA5P08648 1049 aa8.9□□□□□ -0.98
MSH2-202ENST00000406134 MAOBP27338 520 aa8.9□□□□□ -0.98
MSH2-202ENST00000406134 PSMD4P55036 377 aaKnown RBP8.9□□□□□ -0.98
MSH2-202ENST00000406134 COL28A1Q2UY09 1125 aa8.9□□□□□ -0.98
MSH2-202ENST00000406134 ZNF626Q68DY1 528 aa8.9□□□□□ -0.98
MSH2-202ENST00000406134 CHRDL2Q6WN34 429 aa8.9□□□□□ -0.98
MSH2-202ENST00000406134 NUP54Q7Z3B4 507 aa8.9□□□□□ -0.98
MSH2-202ENST00000406134 GLRX5Q86SX6 157 aa8.9□□□□□ -0.98
MSH2-202ENST00000406134 OR52B4Q8NGK2 314 aa8.9□□□□□ -0.98
MSH2-202ENST00000406134 DNAJA3Q96EY1 480 aa8.9□□□□□ -0.98
MSH2-202ENST00000406134 KLHL9Q9P2J3 617 aa8.9□□□□□ -0.98
MSH2-202ENST00000406134 KCNG2Q9UJ96 466 aa8.9□□□□□ -0.98
MSH2-202ENST00000406134 CYP8B1Q9UNU6 501 aa8.9□□□□□ -0.98
MSH2-202ENST00000406134 WDFY4Q6ZS81 3184 aa8.9□□□□□ -0.98
MSH2-202ENST00000406134 TMEM272A0A1B0GTI8 110 aa8.9□□□□□ -0.98
MSH2-202ENST00000406134 A0A1B0GVI7 797 aa8.9□□□□□ -0.98
MSH2-202ENST00000406134 C17orf105B2RV13 164 aa8.9□□□□□ -0.98
MSH2-202ENST00000406134 NPIPB7O75200 414 aa8.9□□□□□ -0.98
MSH2-202ENST00000406134 SERPINI2O75830 405 aa8.9□□□□□ -0.98
MSH2-202ENST00000406134 OR2A4O95047 310 aa8.9□□□□□ -0.98
MSH2-202ENST00000406134 CD1CP29017 333 aa8.9□□□□□ -0.98
MSH2-202ENST00000406134 NUDT1P36639 197 aa8.9□□□□□ -0.98
MSH2-202ENST00000406134 GRM7Q14831 915 aa8.9□□□□□ -0.98
MSH2-202ENST00000406134 WDR38Q5JTN6 314 aa8.9□□□□□ -0.98
MSH2-202ENST00000406134 NKAIN2Q5VXU1 208 aa8.9□□□□□ -0.98
MSH2-202ENST00000406134 SLC6A19Q695T7 634 aa8.9□□□□□ -0.98
MSH2-202ENST00000406134 UXS1Q8NBZ7 420 aa8.9□□□□□ -0.98
MSH2-202ENST00000406134 C8orf44Q96CB5 159 aa8.9□□□□□ -0.98
MSH2-202ENST00000406134 MMABQ96EY8 250 aaPredicted RBP8.9□□□□□ -0.98
MSH2-202ENST00000406134 TCTN2Q96GX1 697 aa8.9□□□□□ -0.98
MSH2-202ENST00000406134 MED30Q96HR3 178 aa8.9□□□□□ -0.98
MSH2-202ENST00000406134 OR2A7Q96R45 310 aa8.9□□□□□ -0.98
MSH2-202ENST00000406134 CCNL2Q96S94 520 aaPredicted RBP8.9□□□□□ -0.98
MSH2-202ENST00000406134 REG4Q9BYZ8 158 aa8.9□□□□□ -0.98
MSH2-202ENST00000406134 C12orf4Q9NQ89 552 aa8.9□□□□□ -0.98
MSH2-202ENST00000406134 ZMAT5Q9UDW3 170 aaKnown RBP8.9□□□□□ -0.98
MSH2-202ENST00000406134 ING4Q9UNL4 249 aa8.9□□□□□ -0.98
MSH2-202ENST00000406134 LOC105371267A0A1B0GV96 52 aa8.9□□□□□ -0.99
MSH2-202ENST00000406134 BLACEA4D250 179 aa8.9□□□□□ -0.99
MSH2-202ENST00000406134 ARHGEF9O43307 516 aa8.9□□□□□ -0.99
MSH2-202ENST00000406134 KRT33AO76009 404 aa8.9□□□□□ -0.99
MSH2-202ENST00000406134 NDUFB6O95139 128 aa8.9□□□□□ -0.99
MSH2-202ENST00000406134 CRYZL1O95825 349 aa8.9□□□□□ -0.99
MSH2-202ENST00000406134 CPN1P15169 458 aa8.9□□□□□ -0.99
MSH2-202ENST00000406134 ZNF250P15622 560 aa8.9□□□□□ -0.99
MSH2-202ENST00000406134 AP2S1P53680 142 aaPredicted RBP8.9□□□□□ -0.99
MSH2-202ENST00000406134 H2BFSP57053 126 aa8.9□□□□□ -0.99
MSH2-202ENST00000406134 RPL6Q02878 288 aaKnown RBP8.9□□□□□ -0.99
MSH2-202ENST00000406134 CFHR1Q03591 330 aa8.9□□□□□ -0.99
MSH2-202ENST00000406134 LGALS3BPQ08380 585 aa8.9□□□□□ -0.99
MSH2-202ENST00000406134 CBFBQ13951 182 aa8.9□□□□□ -0.99
MSH2-202ENST00000406134 POU4F3Q15319 338 aa8.9□□□□□ -0.99
MSH2-202ENST00000406134 PRAMEF17Q5VTA0 474 aa8.9□□□□□ -0.99
MSH2-202ENST00000406134 FDX2Q6P4F2 183 aa8.9□□□□□ -0.99
MSH2-202ENST00000406134 LYPD6Q86Y78 171 aa8.9□□□□□ -0.99
MSH2-202ENST00000406134 PM20D2Q8IYS1 436 aa8.9□□□□□ -0.99
MSH2-202ENST00000406134 PRR22Q8IZ63 422 aa8.9□□□□□ -0.99
MSH2-202ENST00000406134 ZNF433Q8N7K0 673 aaPredicted RBP8.9□□□□□ -0.99
MSH2-202ENST00000406134 OR5AK2Q8NH90 309 aa8.9□□□□□ -0.99
MSH2-202ENST00000406134 C1orf216Q8TAB5 229 aa8.9□□□□□ -0.99
MSH2-202ENST00000406134 ZNF671Q8TAW3 534 aa8.9□□□□□ -0.99
MSH2-202ENST00000406134 NSMAFQ92636 917 aa8.9□□□□□ -0.99
MSH2-202ENST00000406134 PIGKQ92643 395 aa8.9□□□□□ -0.99
MSH2-202ENST00000406134 SRA1Q9HD15 236 aaKnown RBP8.9□□□□□ -0.99
MSH2-202ENST00000406134 UBQLN4Q9NRR5 601 aa8.9□□□□□ -0.99
MSH2-202ENST00000406134 EMC3Q9P0I2 261 aa8.9□□□□□ -0.99
MSH2-202ENST00000406134 MOKQ9UQ07 419 aa8.9□□□□□ -0.99
MSH2-202ENST00000406134 EML6Q6ZMW3 1958 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 A0A1W2PPC4 97 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 WIPF3A6NGB9 483 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 H3BSH0 61 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 ZNF264O43296 627 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 SULT1B1O43704 296 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 TSPAN2O60636 221 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 PNMTP11086 282 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 TACR3P29371 465 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 SOX2P48431 317 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 INSM1Q01101 510 aaPredicted RBP8.89□□□□□ -0.99
MSH2-202ENST00000406134 MFGE8Q08431 387 aaPredicted RBP8.89□□□□□ -0.99
MSH2-202ENST00000406134 ANGPT1Q15389 498 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 TEX30Q5JUR7 227 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 DPY19L4Q7Z388 723 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 SPICQ8N5J4 248 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 NXPE2Q96DL1 559 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 C4orf45Q96LM5 186 aa8.89□□□□□ -0.99
MSH2-202ENST00000406134 OR1F2PQ96R84 312 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms