RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 METAP1P53582 386 aa14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 FXYD6P3P58550 94 aa14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 ACTC1P68032 377 aa14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 ACTA1P68133 377 aa14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 AGERQ15109 404 aa14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 UBE2NLQ5JXB2 153 aa14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 ATPAF1Q5TC12 328 aaPredicted RBP14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 MRM1Q6IN84 353 aaKnown RBP14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 ABHD13Q7L211 337 aa14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 OR6V1Q8N148 313 aa14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 ZNF619Q8N2I2 560 aa14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 SPICQ8N5J4 248 aa14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 OR13C3Q8NGS6 347 aa14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 ZNF845Q96IR2 970 aaPredicted RBP14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 MFRPQ9BY79 579 aa14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 ADGRL4Q9HBW9 690 aa14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 MGAT4CQ9UBM8 478 aa14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 CES1P1Q9UKY3 287 aa14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 RPH3ALQ9UNE2 315 aa14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 RCE1Q9Y256 329 aa14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 STARD10Q9Y365 291 aa14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 A0A1W2PPK0 400 aa14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 GUSBP08236 651 aa14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 CLTBP09497 229 aa14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 F3P13726 295 aa14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 CD200P41217 278 aa14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 PRDX1Q06830 199 aaKnown RBP14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 GAGE1Q13065 139 aa14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 ELFN2Q5R3F8 820 aa14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 C18orf63Q68DL7 685 aa14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 VHLLQ6RSH7 139 aa14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 LINGO2Q7L985 606 aa14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 OVCH1Q7RTY7 1134 aa14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 RANBP3LQ86VV4 465 aaPredicted RBP14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 IZUMO1Q8IYV9 350 aa14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 OR13C5Q8NGS8 318 aa14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 METTL21AQ8WXB1 218 aa14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 PLEKHA1Q9HB21 404 aa14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 MRPL15Q9P015 296 aaKnown RBP14.81□□□□□ -0.04
COL4A3BP-204ENST00000405807 A0A1W2PS29 197 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 TRAPPC13A5PLN9 417 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 ANTXRLA6NF34 631 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 RIIAD1A6NNX1 92 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 YIF1AO95070 293 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 STATHP02808 62 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 ADH1AP07327 375 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 GIPP09681 153 aaPredicted RBP14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 THEGLP0DJG4 465 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 FUT1P19526 365 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 MAKP20794 623 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 SOX8P57073 446 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 ST8SIA6P61647 398 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 ZIC1Q15915 447 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 FRRS1Q6ZNA5 592 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 DEFB128Q7Z7B8 93 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 SLC2A12Q8TD20 617 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 NEK7Q8TDX7 302 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 HIST1H2BAQ96A08 127 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 SLC25A28Q96A46 364 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 MS4A6EQ96DS6 147 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 PRSS27Q9BQR3 290 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 CHST5Q9GZS9 411 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 PTGES2Q9H7Z7 377 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 FAM86C1Q9NVL1 165 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 ZNF223Q9UK11 482 aaPredicted RBP14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 ZNF780BQ9Y6R6 833 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 DENND4CQ5VZ89 1909 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 ZNF749O43361 778 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 ATP1B1P05026 303 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 CPN1P15169 458 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 ABOP16442 354 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 NT5EP21589 574 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 EIPR1Q53HC9 387 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 METRNLQ641Q3 311 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 ABHD17CQ6PCB6 329 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 C11orf88Q6PI97 169 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 TMCO2Q7Z6W1 182 aaPredicted RBP14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 SYT9Q86SS6 491 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 C15orf54Q8N8G6 183 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 ST6GALNAC2Q9UJ37 374 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 SLC35A3Q9Y2D2 325 aa14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 CARHSP1Q9Y2V2 147 aaKnown RBP14.8□□□□□ -0.04
COL4A3BP-204ENST00000405807 MID1O15344 667 aa14.79□□□□□ -0.04
COL4A3BP-204ENST00000405807 C8AP07357 584 aa14.79□□□□□ -0.04
COL4A3BP-204ENST00000405807 PAX1P15863 534 aa14.79□□□□□ -0.04
COL4A3BP-204ENST00000405807 CCR2P41597 374 aa14.79□□□□□ -0.04
COL4A3BP-204ENST00000405807 VASPP50552 380 aaPredicted RBP14.79□□□□□ -0.04
COL4A3BP-204ENST00000405807 RAP2BP61225 183 aa14.79□□□□□ -0.04
COL4A3BP-204ENST00000405807 SEC61A1P61619 476 aaKnown RBP14.79□□□□□ -0.04
COL4A3BP-204ENST00000405807 ZNF836Q6ZNA1 936 aa14.79□□□□□ -0.04
COL4A3BP-204ENST00000405807 FOXRED2Q8IWF2 684 aa14.79□□□□□ -0.04
COL4A3BP-204ENST00000405807 CMTM4Q8IZR5 234 aa14.79□□□□□ -0.04
COL4A3BP-204ENST00000405807 LINC01555Q8NAE3 123 aa14.79□□□□□ -0.04
COL4A3BP-204ENST00000405807 TMEM239Q8WW34 195 aa14.79□□□□□ -0.04
COL4A3BP-204ENST00000405807 SMAD5Q99717 465 aaKnown RBP14.79□□□□□ -0.04
COL4A3BP-204ENST00000405807 MACROD1Q9BQ69 325 aa14.79□□□□□ -0.04
COL4A3BP-204ENST00000405807 TMPRSS13Q9BYE2 586 aa14.79□□□□□ -0.04
COL4A3BP-204ENST00000405807 HAO2Q9NYQ3 351 aa14.79□□□□□ -0.04
COL4A3BP-204ENST00000405807 AK6Q9Y3D8 172 aaKnown RBP14.79□□□□□ -0.04
COL4A3BP-204ENST00000405807 WDR45Q9Y484 360 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms