RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 NPPAP01160 153 aa13.28□□□□□ -0.28
TPM1-207ENST00000403994 IGHV4-31P0DP07 118 aa13.28□□□□□ -0.28
TPM1-207ENST00000403994 UMPSP11172 480 aa13.28□□□□□ -0.28
TPM1-207ENST00000403994 NR4A2P43354 598 aa13.28□□□□□ -0.28
TPM1-207ENST00000403994 PTDSS1P48651 473 aaKnown RBP13.28□□□□□ -0.28
TPM1-207ENST00000403994 PIGFQ07326 219 aa13.28□□□□□ -0.28
TPM1-207ENST00000403994 ZP4Q12836 540 aa13.28□□□□□ -0.28
TPM1-207ENST00000403994 GGTLC2Q14390 218 aa13.28□□□□□ -0.28
TPM1-207ENST00000403994 MAPRE2Q15555 327 aa13.28□□□□□ -0.28
TPM1-207ENST00000403994 DEF8Q6ZN54 512 aa13.28□□□□□ -0.28
TPM1-207ENST00000403994 SPATA21Q7Z572 469 aa13.28□□□□□ -0.28
TPM1-207ENST00000403994 HIPK1Q86Z02 1210 aa13.28□□□□□ -0.28
TPM1-207ENST00000403994 CDK20Q8IZL9 346 aa13.28□□□□□ -0.28
TPM1-207ENST00000403994 IL17RDQ8NFM7 739 aa13.28□□□□□ -0.28
TPM1-207ENST00000403994 PFN4Q8NHR9 129 aa13.28□□□□□ -0.28
TPM1-207ENST00000403994 TMEM255BQ8WV15 326 aa13.28□□□□□ -0.28
TPM1-207ENST00000403994 TMEM54Q969K7 222 aa13.28□□□□□ -0.28
TPM1-207ENST00000403994 GLTPQ9NZD2 209 aa13.28□□□□□ -0.28
TPM1-207ENST00000403994 BAG5Q9UL15 447 aa13.28□□□□□ -0.28
TPM1-207ENST00000403994 SH3GLB1Q9Y371 365 aa13.28□□□□□ -0.28
TPM1-207ENST00000403994 FAM220BPB1ANY3 271 aa13.27□□□□□ -0.29
TPM1-207ENST00000403994 SHOX2O60902 331 aaPredicted RBP13.27□□□□□ -0.29
TPM1-207ENST00000403994 OR5F1O95221 314 aa13.27□□□□□ -0.29
TPM1-207ENST00000403994 RAB36O95755 333 aa13.27□□□□□ -0.29
TPM1-207ENST00000403994 PGA4P0DJD7 388 aa13.27□□□□□ -0.29
TPM1-207ENST00000403994 PGA3P0DJD8 388 aa13.27□□□□□ -0.29
TPM1-207ENST00000403994 NR4A1P22736 598 aa13.27□□□□□ -0.29
TPM1-207ENST00000403994 GIPRP48546 466 aa13.27□□□□□ -0.29
TPM1-207ENST00000403994 UGT2B15P54855 530 aa13.27□□□□□ -0.29
TPM1-207ENST00000403994 TAS2R41P59536 307 aa13.27□□□□□ -0.29
TPM1-207ENST00000403994 CARTPTQ16568 116 aa13.27□□□□□ -0.29
TPM1-207ENST00000403994 MSMPQ1L6U9 139 aa13.27□□□□□ -0.29
TPM1-207ENST00000403994 ERICH5Q6P6B1 374 aa13.27□□□□□ -0.29
TPM1-207ENST00000403994 ZNF566Q969W8 418 aa13.27□□□□□ -0.29
TPM1-207ENST00000403994 SLC25A44Q96H78 314 aaPredicted RBP13.27□□□□□ -0.29
TPM1-207ENST00000403994 ZNF583Q96ND8 569 aa13.27□□□□□ -0.29
TPM1-207ENST00000403994 POLR2J2Q9GZM3 115 aaKnown RBP13.27□□□□□ -0.29
TPM1-207ENST00000403994 POLR2J3Q9H1A7 115 aaKnown RBP13.27□□□□□ -0.29
TPM1-207ENST00000403994 DENND2DQ9H6A0 471 aaPredicted RBP13.27□□□□□ -0.29
TPM1-207ENST00000403994 FBXO9Q9UK97 447 aaPredicted RBP13.27□□□□□ -0.29
TPM1-207ENST00000403994 CAPN7Q9Y6W3 813 aa13.27□□□□□ -0.29
TPM1-207ENST00000403994 IGHV4-61A0A0C4DH41 118 aa13.26□□□□□ -0.29
TPM1-207ENST00000403994 LOC390937A0A1W2PQ73 354 aa13.26□□□□□ -0.29
TPM1-207ENST00000403994 TMEM129A0AVI4 362 aa13.26□□□□□ -0.29
TPM1-207ENST00000403994 UBL3O95164 117 aa13.26□□□□□ -0.29
TPM1-207ENST00000403994 MT-ND1P03886 318 aa13.26□□□□□ -0.29
TPM1-207ENST00000403994 VIMP08670 466 aaKnown RBP13.26□□□□□ -0.29
TPM1-207ENST00000403994 IGFBP1P08833 259 aaPredicted RBP13.26□□□□□ -0.29
TPM1-207ENST00000403994 ZNF35P13682 527 aa13.26□□□□□ -0.29
TPM1-207ENST00000403994 RBM34P42696 430 aaKnown RBP13.26□□□□□ -0.29
TPM1-207ENST00000403994 GUCY1A3Q02108 690 aa13.26□□□□□ -0.29
TPM1-207ENST00000403994 RPL18Q07020 188 aaKnown RBP13.26□□□□□ -0.29
TPM1-207ENST00000403994 CHRFAM7AQ494W8 412 aa13.26□□□□□ -0.29
TPM1-207ENST00000403994 LRRC23Q53EV4 343 aaPredicted RBP13.26□□□□□ -0.29
TPM1-207ENST00000403994 PIWIL3Q7Z3Z3 882 aaKnown RBP13.26□□□□□ -0.29
TPM1-207ENST00000403994 ZNF584Q8IVC4 421 aa13.26□□□□□ -0.29
TPM1-207ENST00000403994 NKAIN4Q8IVV8 208 aa13.26□□□□□ -0.29
TPM1-207ENST00000403994 SLC22A24Q8N4F4 322 aa13.26□□□□□ -0.29
TPM1-207ENST00000403994 NOXO1Q8NFA2 376 aa13.26□□□□□ -0.29
TPM1-207ENST00000403994 C10orf82Q8WW14 230 aa13.26□□□□□ -0.29
TPM1-207ENST00000403994 DOK1Q99704 481 aa13.26□□□□□ -0.29
TPM1-207ENST00000403994 RAB1BQ9H0U4 201 aa13.26□□□□□ -0.29
TPM1-207ENST00000403994 DYNLRB1Q9NP97 96 aa13.26□□□□□ -0.29
TPM1-207ENST00000403994 C20orf141Q9NUB4 165 aa13.26□□□□□ -0.29
TPM1-207ENST00000403994 TMEM38BQ9NVV0 291 aa13.26□□□□□ -0.29
TPM1-207ENST00000403994 ANK2Q01484 3957 aa13.26□□□□□ -0.29
TPM1-207ENST00000403994 BLOC1S5-TXNDC5H3BN57 136 aa13.25□□□□□ -0.29
TPM1-207ENST00000403994 OR7A10O76100 309 aa13.25□□□□□ -0.29
TPM1-207ENST00000403994 IGF2P01344 180 aa13.25□□□□□ -0.29
TPM1-207ENST00000403994 IGHG1P01857 330 aa13.25□□□□□ -0.29
TPM1-207ENST00000403994 HIST1H2ABP04908 130 aa13.25□□□□□ -0.29
TPM1-207ENST00000403994 OR1E2P47887 323 aa13.25□□□□□ -0.29
TPM1-207ENST00000403994 RAB1AP62820 205 aa13.25□□□□□ -0.29
TPM1-207ENST00000403994 LSM11P83369 360 aaKnown RBP eCLIP13.25□□□□□ -0.29
TPM1-207ENST00000403994 RUNX1T1Q06455 604 aa13.25□□□□□ -0.29
TPM1-207ENST00000403994 CYBRD1Q53TN4 286 aa13.25□□□□□ -0.29
TPM1-207ENST00000403994 CYB5R2Q6BCY4 276 aa13.25□□□□□ -0.29
TPM1-207ENST00000403994 LRFN4Q6PJG9 635 aa13.25□□□□□ -0.29
TPM1-207ENST00000403994 HIST3H2AQ7L7L0 130 aa13.25□□□□□ -0.29
TPM1-207ENST00000403994 CXXC5Q7LFL8 322 aaKnown RBP13.25□□□□□ -0.29
TPM1-207ENST00000403994 SKA3Q8IX90 412 aa13.25□□□□□ -0.29
TPM1-207ENST00000403994 ZCCHC24Q8N2G6 241 aaKnown RBP13.25□□□□□ -0.29
TPM1-207ENST00000403994 PCYOX1LQ8NBM8 494 aa13.25□□□□□ -0.29
TPM1-207ENST00000403994 OR2T12Q8NG77 320 aa13.25□□□□□ -0.29
TPM1-207ENST00000403994 FGFBP3Q8TAT2 258 aa13.25□□□□□ -0.29
TPM1-207ENST00000403994 TMEM239Q8WW34 195 aa13.25□□□□□ -0.29
TPM1-207ENST00000403994 HIST1H2ACQ93077 130 aa13.25□□□□□ -0.29
TPM1-207ENST00000403994 MRPL24Q96A35 216 aaKnown RBP13.25□□□□□ -0.29
TPM1-207ENST00000403994 RCN3Q96D15 328 aa13.25□□□□□ -0.29
TPM1-207ENST00000403994 FOXN4Q96NZ1 517 aa13.25□□□□□ -0.29
TPM1-207ENST00000403994 SEPHS2Q99611 448 aa13.25□□□□□ -0.29
TPM1-207ENST00000403994 MRPL37Q9BZE1 423 aaKnown RBP13.25□□□□□ -0.29
TPM1-207ENST00000403994 BPESC1Q9GZL8 116 aa13.25□□□□□ -0.29
TPM1-207ENST00000403994 CCDC134Q9H6E4 229 aa13.25□□□□□ -0.29
TPM1-207ENST00000403994 GID8Q9NWU2 228 aa13.25□□□□□ -0.29
TPM1-207ENST00000403994 TMEM160Q9NX00 188 aa13.25□□□□□ -0.29
TPM1-207ENST00000403994 ARMCX1Q9P291 453 aa13.25□□□□□ -0.29
TPM1-207ENST00000403994 RIMS3Q9UJD0 308 aa13.25□□□□□ -0.29
TPM1-207ENST00000403994 CDC42EP3Q9UKI2 254 aa13.25□□□□□ -0.29
TPM1-207ENST00000403994 FBXL3Q9UKT7 428 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms