RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 OTOGLQ3ZCN5 2332 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 SPTBP11277 2137 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 DNAH14Q0VDD8 3507 aa3.94□□□□□ -1.78
HMGB3P19-201ENST00000403971 COL5A1P20908 1838 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 IGHV3-16A0A0C4DH30 117 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 OR5K4A6NMS3 321 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 SRRM5B3KS81 715 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 YKT6O15498 198 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 ZBTB14O43829 449 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 DFNA5O60443 496 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 SMIM24O75264 130 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 CATP04040 527 aaKnown RBP3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 CSF2P04141 144 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 RPN2P04844 631 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 BPGMP07738 259 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 CCDC159P0C7I6 412 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 MYL2P10916 166 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 ACADSP16219 412 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 TAC1P20366 129 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 IDSP22304 550 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 GATA2P23769 480 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 SERPINB5P36952 375 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 HNMTP50135 292 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 DNAJB13P59910 316 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 RPS4XP62701 263 aaKnown RBP3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 IL9RQ01113 521 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 TSTA3Q13630 321 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 KLF5Q13887 457 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 FZD2Q14332 565 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 ARHGAP19Q14CB8 494 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 ELOCQ15369 112 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 ANGPT1Q15389 498 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 TGFBIQ15582 683 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 TSNQ15631 228 aaKnown RBP3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 PDK4Q16654 411 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 PPP1R3AQ16821 1122 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 TMEM44Q2T9K0 475 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 UNC50Q53HI1 259 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 CMPK2Q5EBM0 449 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 TPRG1LQ5T0D9 272 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 LIPJQ5W064 366 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 WDR25Q64LD2 544 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 LEMD1Q68G75 181 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 SULT1C3Q6IMI6 304 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 DLEU7Q6UYE1 221 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 ZYG11AQ6WRX3 759 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 NUDCD3Q8IVD9 361 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 SLC22A18ASQ8N1D0 253 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 TCAIMQ8N3R3 496 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 ICA1LQ8NDH6 482 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 MCOLN3Q8TDD5 553 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 FAM222BQ8WU58 562 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 TFGQ92734 400 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 TAF15Q92804 592 aaKnown RBP eCLIP3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 RAD51AP1Q96B01 352 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 RAB3CQ96E17 227 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 L3HYPDHQ96EM0 354 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 PDXPQ96GD0 296 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 C16orf58Q96GQ5 468 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 MAGEB18Q96M61 343 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 DCTN5Q9BTE1 182 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 CAPS2Q9BXY5 557 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 GSDMCQ9BYG8 508 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 ALG9Q9H6U8 611 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 PARVBQ9HBI1 364 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 MRPL40Q9NQ50 206 aaKnown RBP3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 TAS2R16Q9NYV7 291 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 SLC17A7Q9P2U7 560 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 SLC23A2Q9UGH3 650 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 RARRES3Q9UL19 164 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 SPATA2Q9UM82 520 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 CA5BQ9Y2D0 317 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 MRPS2Q9Y399 296 aaKnown RBP3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 OARD1Q9Y530 152 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 PCYT1BQ9Y5K3 369 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 HEBP2Q9Y5Z4 205 aa3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 NUP214P35658 2090 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P19-201ENST00000403971 A0A1B0GTH9 108 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 A8MT66 165 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 TMEM114B3SHH9 223 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 UBXN8O00124 270 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 CDC7O00311 574 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 SH2D1BO14796 132 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 TXNL1O43396 289 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 SHOX2O60902 331 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 C1orf105O95561 183 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 SERPINE1P05121 402 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 RPS17P08708 135 aaKnown RBP3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 ANXA5P08758 320 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 HIST1H2AGP0C0S8 130 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 SLC35G4P0C7Q5 338 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 ERGP11308 486 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 CTSEP14091 401 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 GFAPP14136 432 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 GATA1P15976 413 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 XRCC1P18887 633 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 IMPDH1P20839 514 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 AHCYP23526 432 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 ALDH3A1P30838 453 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 HSD17B2P37059 387 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms