RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 DEFA4P12838 97 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 UBE2NLQ5JXB2 153 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 APOOLQ6UXV4 268 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 BCDIN3DQ7Z5W3 292 aaKnown RBP13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 KMT5CQ86Y97 462 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 OCSTAMPQ9BR26 566 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 ALG12Q9BV10 488 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 NMNAT2Q9BZQ4 307 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 GNG13Q9P2W3 67 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 SLC22A7Q9Y694 548 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 CAPZBP47756 277 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 METAP1DQ6UB28 335 aaPredicted RBP13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 BPIFB2Q8N4F0 458 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 FNDC8Q8TC99 324 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 SLC46A1Q96NT5 459 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 OR51J1Q9H342 316 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 A0A1W2PPH5 198 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 ZNF705FA8MVS1 300 aaPredicted RBP13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 HSBP1L1C9JCN9 74 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 DPM1O60762 260 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 ZNF705DP0CH99 300 aaPredicted RBP13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 ZNF705BP0CI00 300 aaPredicted RBP13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 GNB1P62873 340 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 ZNF691Q5VV52 312 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 ABHD4Q8TB40 342 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 TMEM255BQ8WV15 326 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 C17orf50Q8WW18 174 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 PRR14Q9BWN1 585 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 EVA1AQ9H8M9 152 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 PDFQ9HBH1 243 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 TAS2R16Q9NYV7 291 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 ADAM29Q9UKF5 820 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 PDLIM3Q53GG5 364 aaPredicted RBP13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 VWA2Q5GFL6 755 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 FAM69AQ5T7M9 428 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 SHEQ5VZ18 495 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 MYO10Q9HD67 2058 aa13.11□□□□□ -0.31
PCDHA11-201ENST00000398640 NAP1L6A6NFF2 107 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 SEC14L2O76054 403 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 DUSP2Q05923 314 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 TUBB1Q9H4B7 451 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 GALNT9Q9HCQ5 603 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 GPATCH2Q9NW75 528 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 ZNF891A8MT65 544 aaPredicted RBP13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 GAPDHSO14556 408 aaPredicted RBP13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 SLCO2B1O94956 709 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 PTTG1O95997 202 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 ITGAMP11215 1152 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 COL9A1P20849 921 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 CHATP28329 748 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 EMX1Q04741 257 aaPredicted RBP13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 MFAP5Q13361 173 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 CCSMST1Q4G0I0 132 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 COX20Q5RI15 118 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 FRMPD2BQ6IN97 320 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 CCL4L1Q8NHW4 92 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 NDRG3Q9UGV2 375 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 PROCRQ9UNN8 238 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 SSTR2P30874 369 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 POU4F3Q15319 338 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 TINAGL1Q9GZM7 467 aaPredicted RBP13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 P2RY12Q9H244 342 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 TRAV36DV7A0A075B6V5 113 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 GFRA3O60609 400 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 CISD3P0C7P0 127 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 NME1P15531 152 aaKnown RBP13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 TAS2R19P59542 299 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 TRA2AQ13595 282 aaKnown RBP eCLIP13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 TMEM185AQ8NFB2 350 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 OR4A16Q8NH70 328 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 NKX3-1Q99801 234 aaPredicted RBP13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 MRI1Q9BV20 369 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 EGLN1Q9GZT9 426 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 CXorf51AA0A1B0GTR3 108 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 TARM1B6A8C7 271 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 EFSO43281 561 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 AKR7A3O95154 331 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 CNIH1O95406 144 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 SNRPBP14678 240 aaKnown RBP13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 ALKBH6Q3KRA9 238 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 SPRED2Q7Z698 418 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 RBMXL3Q8N7X1 1067 aaKnown RBP13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 MYEOVQ96EZ4 313 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 ZNF578Q96N58 590 aaPredicted RBP13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 RCE1Q9Y256 329 aa13.1□□□□□ -0.31
PCDHA11-201ENST00000398640 SULT1B1O43704 296 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 PRKAR1BP31321 381 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 SPCS2Q15005 226 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 MSMO1Q15800 293 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 KCTD11Q693B1 232 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 PIGTQ969N2 578 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 TM4SF18Q96CE8 201 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 SLC25A31Q9H0C2 315 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 SLC38A1Q9H2H9 487 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 ASB4Q9Y574 426 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 AKR1C1Q04828 323 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 TSPAN31Q12999 210 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 SUMF2Q8NBJ7 301 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 GABRG3Q99928 467 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 HRH4Q9H3N8 390 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms