RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 ZNF629Q9UEG4 869 aaPredicted RBP17.23■□□□□ 0.35
MAP1LC3A-203ENST00000397709 KLHL21Q9UJP4 597 aa17.23■□□□□ 0.35
MAP1LC3A-203ENST00000397709 FOXD3Q9UJU5 478 aaPredicted RBP17.23■□□□□ 0.35
MAP1LC3A-203ENST00000397709 NDRG4Q9ULP0 352 aaKnown RBP17.23■□□□□ 0.35
MAP1LC3A-203ENST00000397709 ALPK2Q86TB3 2170 aa17.23■□□□□ 0.35
MAP1LC3A-203ENST00000397709 INTS1Q8N201 2190 aaKnown RBP17.23■□□□□ 0.35
MAP1LC3A-203ENST00000397709 LOC100130705A0A1B0GUX0 176 aa17.22■□□□□ 0.35
MAP1LC3A-203ENST00000397709 XKRYO14609 159 aa17.22■□□□□ 0.35
MAP1LC3A-203ENST00000397709 SURF4O15260 269 aa17.22■□□□□ 0.35
MAP1LC3A-203ENST00000397709 ARHGEF9O43307 516 aa17.22■□□□□ 0.35
MAP1LC3A-203ENST00000397709 SLC43A1O75387 559 aa17.22■□□□□ 0.35
MAP1LC3A-203ENST00000397709 SLC2A10O95528 541 aa17.22■□□□□ 0.35
MAP1LC3A-203ENST00000397709 GGT2P36268 569 aa17.22■□□□□ 0.35
MAP1LC3A-203ENST00000397709 CDKN2AP42771 156 aaKnown RBP17.22■□□□□ 0.35
MAP1LC3A-203ENST00000397709 ADARB1P78563 741 aaKnown RBP17.22■□□□□ 0.35
MAP1LC3A-203ENST00000397709 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.22■□□□□ 0.35
MAP1LC3A-203ENST00000397709 CARD17Q5XLA6 110 aa17.22■□□□□ 0.35
MAP1LC3A-203ENST00000397709 MTFR2Q6P444 385 aa17.22■□□□□ 0.35
MAP1LC3A-203ENST00000397709 TFAP2EQ6VUC0 442 aa17.22■□□□□ 0.35
MAP1LC3A-203ENST00000397709 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.22■□□□□ 0.35
MAP1LC3A-203ENST00000397709 C20orf196Q8IYI0 205 aa17.22■□□□□ 0.35
MAP1LC3A-203ENST00000397709 ZNF555Q8NEP9 628 aa17.22■□□□□ 0.35
MAP1LC3A-203ENST00000397709 NOXO1Q8NFA2 376 aa17.22■□□□□ 0.35
MAP1LC3A-203ENST00000397709 OR4K13Q8NH42 304 aa17.22■□□□□ 0.35
MAP1LC3A-203ENST00000397709 TMEM54Q969K7 222 aa17.22■□□□□ 0.35
MAP1LC3A-203ENST00000397709 LRR1Q96L50 414 aa17.22■□□□□ 0.35
MAP1LC3A-203ENST00000397709 SNX18Q96RF0 628 aa17.22■□□□□ 0.35
MAP1LC3A-203ENST00000397709 LINC00470Q9BZP3 86 aa17.22■□□□□ 0.35
MAP1LC3A-203ENST00000397709 CMC2Q9NRP2 79 aa17.22■□□□□ 0.35
MAP1LC3A-203ENST00000397709 PLSCR4Q9NRQ2 329 aa17.22■□□□□ 0.35
MAP1LC3A-203ENST00000397709 VSX1Q9NZR4 365 aaPredicted RBP17.22■□□□□ 0.35
MAP1LC3A-203ENST00000397709 PROCRQ9UNN8 238 aa17.22■□□□□ 0.35
MAP1LC3A-203ENST00000397709 RNF6Q9Y252 685 aa17.22■□□□□ 0.35
MAP1LC3A-203ENST00000397709 NCOA6Q14686 2063 aaPredicted RBP17.22■□□□□ 0.35
MAP1LC3A-203ENST00000397709 MYO7BQ6PIF6 2116 aa17.21■□□□□ 0.35
MAP1LC3A-203ENST00000397709 PRSS37A4D1T9 235 aa17.21■□□□□ 0.35
MAP1LC3A-203ENST00000397709 OR6C65A6NJZ3 312 aa17.21■□□□□ 0.35
MAP1LC3A-203ENST00000397709 AHCYL1O43865 530 aa17.21■□□□□ 0.35
MAP1LC3A-203ENST00000397709 IFNGP01579 166 aa17.21■□□□□ 0.35
MAP1LC3A-203ENST00000397709 CD8BP10966 210 aa17.21■□□□□ 0.35
MAP1LC3A-203ENST00000397709 CSNK1A1P48729 337 aa17.21■□□□□ 0.35
MAP1LC3A-203ENST00000397709 KEAP1Q14145 624 aa17.21■□□□□ 0.35
MAP1LC3A-203ENST00000397709 HIST3H3Q16695 136 aa17.21■□□□□ 0.35
MAP1LC3A-203ENST00000397709 TSPO2Q5TGU0 170 aa17.21■□□□□ 0.35
MAP1LC3A-203ENST00000397709 JAZF1Q86VZ6 243 aa17.21■□□□□ 0.35
MAP1LC3A-203ENST00000397709 CCDC71Q8IV32 467 aaPredicted RBP17.21■□□□□ 0.35
MAP1LC3A-203ENST00000397709 ZNF100Q8IYN0 542 aa17.21■□□□□ 0.35
MAP1LC3A-203ENST00000397709 DHRSXQ8N5I4 330 aa17.21■□□□□ 0.35
MAP1LC3A-203ENST00000397709 SLC37A3Q8NCC5 494 aa17.21■□□□□ 0.35
MAP1LC3A-203ENST00000397709 NPEPL1Q8NDH3 523 aa17.21■□□□□ 0.35
MAP1LC3A-203ENST00000397709 SDR9C7Q8NEX9 313 aa17.21■□□□□ 0.35
MAP1LC3A-203ENST00000397709 OR52E2Q8NGJ4 325 aa17.21■□□□□ 0.35
MAP1LC3A-203ENST00000397709 NMD3Q96D46 503 aaKnown RBP17.21■□□□□ 0.35
MAP1LC3A-203ENST00000397709 SLC38A2Q96QD8 506 aa17.21■□□□□ 0.35
MAP1LC3A-203ENST00000397709 DDOQ99489 341 aa17.21■□□□□ 0.35
MAP1LC3A-203ENST00000397709 PRRG3Q9BZD7 231 aa17.21■□□□□ 0.35
MAP1LC3A-203ENST00000397709 SLCO5A1Q9H2Y9 848 aa17.21■□□□□ 0.35
MAP1LC3A-203ENST00000397709 TVP23BQ9NYZ1 205 aa17.21■□□□□ 0.35
MAP1LC3A-203ENST00000397709 GMPPBQ9Y5P6 360 aa17.21■□□□□ 0.35
MAP1LC3A-203ENST00000397709 HIVEP3Q5T1R4 2406 aa17.2■□□□□ 0.34
MAP1LC3A-203ENST00000397709 RELNP78509 3460 aa17.2■□□□□ 0.34
MAP1LC3A-203ENST00000397709 SLC22A23A1A5C7 686 aa17.2■□□□□ 0.34
MAP1LC3A-203ENST00000397709 RIIAD1A6NNX1 92 aa17.2■□□□□ 0.34
MAP1LC3A-203ENST00000397709 H0YAE9 185 aa17.2■□□□□ 0.34
MAP1LC3A-203ENST00000397709 H7C1C5 153 aa17.2■□□□□ 0.34
MAP1LC3A-203ENST00000397709 UPK3AO75631 287 aa17.2■□□□□ 0.34
MAP1LC3A-203ENST00000397709 ZNF3P17036 446 aa17.2■□□□□ 0.34
MAP1LC3A-203ENST00000397709 CAPGP40121 348 aa17.2■□□□□ 0.34
MAP1LC3A-203ENST00000397709 CLRN1P58418 232 aa17.2■□□□□ 0.34
MAP1LC3A-203ENST00000397709 LCN6P62502 163 aa17.2■□□□□ 0.34
MAP1LC3A-203ENST00000397709 LGALS3BPQ08380 585 aa17.2■□□□□ 0.34
MAP1LC3A-203ENST00000397709 SNAPC1Q16533 368 aa17.2■□□□□ 0.34
MAP1LC3A-203ENST00000397709 PHYHD1Q5SRE7 291 aa17.2■□□□□ 0.34
MAP1LC3A-203ENST00000397709 TTC23Q5W5X9 447 aa17.2■□□□□ 0.34
MAP1LC3A-203ENST00000397709 LEG1Q6P5S2 330 aa17.2■□□□□ 0.34
MAP1LC3A-203ENST00000397709 LIX1LQ8IVB5 337 aa17.2■□□□□ 0.34
MAP1LC3A-203ENST00000397709 POMGNT2Q8NAT1 580 aa17.2■□□□□ 0.34
MAP1LC3A-203ENST00000397709 SYT14Q8NB59 555 aa17.2■□□□□ 0.34
MAP1LC3A-203ENST00000397709 CYGBQ8WWM9 190 aa17.2■□□□□ 0.34
MAP1LC3A-203ENST00000397709 TFAP2CQ92754 450 aa17.2■□□□□ 0.34
MAP1LC3A-203ENST00000397709 NMNAT3Q96T66 252 aa17.2■□□□□ 0.34
MAP1LC3A-203ENST00000397709 PIGMQ9H3S5 423 aa17.2■□□□□ 0.34
MAP1LC3A-203ENST00000397709 GLTPQ9NZD2 209 aa17.2■□□□□ 0.34
MAP1LC3A-203ENST00000397709 PRSS50Q9UI38 385 aa17.2■□□□□ 0.34
MAP1LC3A-203ENST00000397709 FREM1Q5H8C1 2179 aa17.19■□□□□ 0.34
MAP1LC3A-203ENST00000397709 OR6C68A6NDL8 312 aa17.19■□□□□ 0.34
MAP1LC3A-203ENST00000397709 DVL2O14641 736 aa17.19■□□□□ 0.34
MAP1LC3A-203ENST00000397709 BMP5P22003 454 aa17.19■□□□□ 0.34
MAP1LC3A-203ENST00000397709 HSPA13P48723 471 aa17.19■□□□□ 0.34
MAP1LC3A-203ENST00000397709 PCYT1AP49585 367 aa17.19■□□□□ 0.34
MAP1LC3A-203ENST00000397709 ZNF133P52736 654 aaPredicted RBP17.19■□□□□ 0.34
MAP1LC3A-203ENST00000397709 CDC42P60953 191 aa17.19■□□□□ 0.34
MAP1LC3A-203ENST00000397709 EFNB1P98172 346 aa17.19■□□□□ 0.34
MAP1LC3A-203ENST00000397709 CRMP1Q14194 572 aa17.19■□□□□ 0.34
MAP1LC3A-203ENST00000397709 RELL2Q8NC24 303 aaPredicted RBP17.19■□□□□ 0.34
MAP1LC3A-203ENST00000397709 OR6N1Q8NGY5 312 aa17.19■□□□□ 0.34
MAP1LC3A-203ENST00000397709 FAM81AQ8TBF8 368 aa17.19■□□□□ 0.34
MAP1LC3A-203ENST00000397709 FNDC8Q8TC99 324 aa17.19■□□□□ 0.34
MAP1LC3A-203ENST00000397709 OPN3Q9H1Y3 402 aaPredicted RBP17.19■□□□□ 0.34
MAP1LC3A-203ENST00000397709 SLC7A10Q9NS82 523 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms