RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 OR2B2Q9GZK3 357 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.3□□□□□ -1.56
PTPRD-206ENST00000397617 ADAMTS20P59510 1910 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 TRBV5-7A0A0A0MS05 114 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 IFITM5A6NNB3 132 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 SLC17A2O00624 439 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 DLGAP3O95886 979 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 CPN1P15169 458 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 ZNF41P51814 821 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-206ENST00000397617 EXOSC7Q15024 291 aaKnown RBP5.3□□□□□ -1.56
PTPRD-206ENST00000397617 FAHD2BQ6P2I3 314 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-206ENST00000397617 FIGNL1Q6PIW4 674 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 FGD2Q7Z6J4 655 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 FAM20CQ8IXL6 584 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 RLN3Q8WXF3 142 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 FAHD2AQ96GK7 314 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 ABCB9Q9NP78 766 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 MTRF1O75570 445 aaKnown RBP5.3□□□□□ -1.56
PTPRD-206ENST00000397617 GLAP06280 429 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 POU2F1P14859 743 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 HIST3H3Q16695 136 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 PRSS41Q7RTY9 318 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 C2orf73Q8N5S3 287 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-206ENST00000397617 DNAAF1Q8NEP3 725 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 OR10Q1Q8NGQ4 319 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 ZNF563Q8TA94 476 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 DHRS9Q9BPW9 319 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 DPH1Q9BZG8 443 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 A0A0U1RQV5 110 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 FRS3O43559 492 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 HSMCR30P0CW71 290 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 RAB3BP20337 219 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 RPS19P39019 145 aaKnown RBP5.3□□□□□ -1.56
PTPRD-206ENST00000397617 COMTD1Q86VU5 262 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 OR2G2Q8NGZ5 317 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 OR51A7Q8NH64 312 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 ENKURQ8TC29 256 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 OBP2BQ9NPH6 170 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 METTL21EPA6NDL7 271 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 TGFBR3LH3BV60 316 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 J3KTA2 159 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 GABRPO00591 440 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 TRAF3IP2O43734 574 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-206ENST00000397617 IGHG1P01857 330 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 CCL1P22362 96 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 GRB2P62993 217 aaKnown RBP5.3□□□□□ -1.56
PTPRD-206ENST00000397617 BTG2P78543 158 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 RPL18Q07020 188 aaKnown RBP5.3□□□□□ -1.56
PTPRD-206ENST00000397617 SOWAHCQ53LP3 525 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-206ENST00000397617 DCAF12Q5T6F0 453 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 PLBD1Q6P4A8 553 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 OR13C2Q8NGS9 318 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 TNFRSF13CQ96RJ3 184 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 NAA50Q9GZZ1 169 aaKnown RBP5.3□□□□□ -1.56
PTPRD-206ENST00000397617 LY6G6EA0A0G2JKS1 128 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 SNPHO15079 494 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 KLF7O75840 302 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-206ENST00000397617 TNFRSF1BP20333 461 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 HSD11B1P28845 292 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 ETV5P41161 510 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 ETV1P50549 477 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 TRIM61Q5EBN2 209 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 FAM198BQ6UWH4 519 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 ZNF100Q8IYN0 542 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 DTWD2Q8NBA8 298 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 DERL3Q96Q80 235 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 OR2M2Q96R28 347 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 MIR1-1HGQ9H1L0 117 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 U3KQA8 63 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 IGHV5-10-1A0A0J9YXX1 117 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 LIPT2A6NK58 231 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 MST1P26927 711 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 RPS15P62841 145 aaKnown RBP5.3□□□□□ -1.56
PTPRD-206ENST00000397617 ZNF117Q03924 483 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 LAPTM4AQ15012 233 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 KCNJ8Q15842 424 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 ABHD4Q8TB40 342 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 DIRAS2Q96HU8 199 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 TAAR9Q96RI9 348 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 KCNK17Q96T54 332 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 GON7Q9BXV9 100 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 SLC6A17Q9H1V8 727 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 RHOFQ9HBH0 211 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 GLRX2Q9NS18 164 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 C20orf141Q9NUB4 165 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 PLEKHB1Q9UF11 243 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-206ENST00000397617 B9D1Q9UPM9 204 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 CA5BQ9Y2D0 317 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 TMED7Q9Y3B3 224 aa5.3□□□□□ -1.56
PTPRD-206ENST00000397617 IGLV1-36A0A0B4J1U3 117 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 FABP12A6NFH5 140 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 EPXP11678 715 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 GDI2P50395 445 aaKnown RBP5.29□□□□□ -1.56
PTPRD-206ENST00000397617 DSCR4P56555 118 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-206ENST00000397617 GALK2Q01415 458 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 LIPKQ5VXJ0 399 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 GLT8D1Q68CQ7 371 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 TMPPEQ6ZT21 453 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 ANKRD37Q7Z713 158 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 SLC26A10Q8NG04 563 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms