RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 HMGB4Q8WW32 186 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 ACOT11Q8WXI4 607 aaPredicted RBP4.6□□□□□ -1.67
SSR1-202ENST00000397511 OR1E3Q8WZA6 343 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 ZNF681Q96N22 645 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 MAP3K3Q99759 626 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 GINS4Q9BRT9 223 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 TCEAL2Q9H3H9 227 aaPredicted RBP4.6□□□□□ -1.67
SSR1-202ENST00000397511 RNF122Q9H9V4 155 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 IL21RQ9HBE5 538 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 BARX1Q9HBU1 254 aaPredicted RBP4.6□□□□□ -1.67
SSR1-202ENST00000397511 NANSQ9NR45 359 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 CARHSP1Q9Y2V2 147 aaKnown RBP4.6□□□□□ -1.67
SSR1-202ENST00000397511 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.6□□□□□ -1.67
SSR1-202ENST00000397511 LTBP2Q14767 1821 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 C4orf47A7E2U8 309 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 OIP5O43482 229 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 ICOSLGO75144 302 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 KHDRBS3O75525 346 aaKnown RBP4.6□□□□□ -1.67
SSR1-202ENST00000397511 PPP1R3DO95685 299 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 AGR2O95994 175 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 APODP05090 189 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 CELA2BP08218 269 aaPredicted RBP4.6□□□□□ -1.67
SSR1-202ENST00000397511 RPA2P15927 270 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 COL9A1P20849 921 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 MPGP29372 298 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 HOXA6P31267 233 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 RAD52P43351 418 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 ADPRHP54922 357 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 FXYD6P3P58550 94 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 STARD6P59095 220 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 AP3S2P59780 193 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 RPS21P63220 83 aaKnown RBP4.6□□□□□ -1.67
SSR1-202ENST00000397511 EFNB1P98172 346 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 GPR18Q14330 331 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 MELKQ14680 651 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 OR1Q1Q15612 314 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 SLC25A35Q3KQZ1 300 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 TP53I3Q53FA7 332 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 TMEM196Q5HYL7 178 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 ZNF626Q68DY1 528 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 RPL13AP3Q6NVV1 102 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 POMZP3Q6PJE2 187 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 ZNF620Q6ZNG0 422 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 DGAT2L6Q6ZPD8 337 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 SSX6Q7RTT6 188 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 PRSS45Q7RTY3 260 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 NRROSQ86YC3 692 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 MISPQ8IVT2 679 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 DMRTC2Q8IXT2 367 aaPredicted RBP4.6□□□□□ -1.67
SSR1-202ENST00000397511 ZNF561Q8N587 486 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 BMPERQ8N8U9 685 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 SDR9C7Q8NEX9 313 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 OR4K13Q8NH42 304 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 RFKQ969G6 155 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 ZMYND19Q96E35 227 aaPredicted RBP4.6□□□□□ -1.67
SSR1-202ENST00000397511 C4orf36Q96KX1 117 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 CD180Q99467 661 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 SDF2Q99470 211 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 ORAI3Q9BRQ5 295 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 PBX4Q9BYU1 374 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 BCL2L10Q9HD36 194 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 MRPS18AQ9NVS2 196 aaKnown RBP4.6□□□□□ -1.67
SSR1-202ENST00000397511 SIDT1Q9NXL6 827 aaKnown RBP4.6□□□□□ -1.67
SSR1-202ENST00000397511 TAS2R5Q9NYW4 299 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 OPN4Q9UHM6 478 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 OR10H1Q9Y4A9 318 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 MPDZO75970 2070 aa4.6□□□□□ -1.67
SSR1-202ENST00000397511 A0A087WV48 116 aa4.59□□□□□ -1.67
SSR1-202ENST00000397511 A0A1B0GVT2 93 aa4.59□□□□□ -1.67
SSR1-202ENST00000397511 F5H5P2 479 aa4.59□□□□□ -1.67
SSR1-202ENST00000397511 GSTZ1O43708 216 aaPredicted RBP4.59□□□□□ -1.67
SSR1-202ENST00000397511 IL5P05113 134 aa4.59□□□□□ -1.67
SSR1-202ENST00000397511 PTHLHP12272 177 aa4.59□□□□□ -1.67
SSR1-202ENST00000397511 HOXB2P14652 356 aa4.59□□□□□ -1.67
SSR1-202ENST00000397511 MUC1P15941 1255 aaPredicted RBP4.59□□□□□ -1.67
SSR1-202ENST00000397511 FCARP24071 287 aa4.59□□□□□ -1.67
SSR1-202ENST00000397511 ABCD3P28288 659 aa4.59□□□□□ -1.67
SSR1-202ENST00000397511 GDNFP39905 211 aa4.59□□□□□ -1.67
SSR1-202ENST00000397511 PSMB10P40306 273 aa4.59□□□□□ -1.67
SSR1-202ENST00000397511 RPS27P42677 84 aaKnown RBP4.59□□□□□ -1.67
SSR1-202ENST00000397511 ANXA11P50995 505 aaKnown RBP4.59□□□□□ -1.67
SSR1-202ENST00000397511 CCR9P51686 369 aa4.59□□□□□ -1.67
SSR1-202ENST00000397511 ILF3Q12906 894 aaKnown RBP eCLIP4.59□□□□□ -1.676e-8■■■■■ 27.4
SSR1-202ENST00000397511 FZD5Q13467 585 aa4.59□□□□□ -1.67
SSR1-202ENST00000397511 CRMP1Q14194 572 aa4.59□□□□□ -1.67
SSR1-202ENST00000397511 ZIC1Q15915 447 aa4.59□□□□□ -1.67
SSR1-202ENST00000397511 NDUFA9Q16795 377 aa4.59□□□□□ -1.67
SSR1-202ENST00000397511 TMEM35AQ53FP2 167 aa4.59□□□□□ -1.67
SSR1-202ENST00000397511 ELFN2Q5R3F8 820 aa4.59□□□□□ -1.67
SSR1-202ENST00000397511 C1orf53Q5VUE5 145 aa4.59□□□□□ -1.67
SSR1-202ENST00000397511 AADACL4Q5VUY2 407 aa4.59□□□□□ -1.67
SSR1-202ENST00000397511 MRM1Q6IN84 353 aaKnown RBP4.59□□□□□ -1.67
SSR1-202ENST00000397511 SFXN4Q6P4A7 337 aa4.59□□□□□ -1.67
SSR1-202ENST00000397511 ZNF322Q6U7Q0 402 aaPredicted RBP4.59□□□□□ -1.67
SSR1-202ENST00000397511 NHLRC1Q6VVB1 395 aa4.59□□□□□ -1.67
SSR1-202ENST00000397511 CEACAM19Q7Z692 300 aa4.59□□□□□ -1.67
SSR1-202ENST00000397511 DEFB119Q8N690 84 aa4.59□□□□□ -1.67
SSR1-202ENST00000397511 FAM98AQ8NCA5 519 aaKnown RBP4.59□□□□□ -1.67
SSR1-202ENST00000397511 OR52L1Q8NGH7 329 aa4.59□□□□□ -1.67
SSR1-202ENST00000397511 OR5J2Q8NH18 312 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms