RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 TRIB1Q96RU8 372 aa18.85■□□□□ 0.61
CPNE1-204ENST00000397443 COPS4Q9BT78 406 aa18.85■□□□□ 0.61
CPNE1-204ENST00000397443 YTHDF1Q9BYJ9 559 aaKnown RBP18.85■□□□□ 0.61
CPNE1-204ENST00000397443 CNTNAP3Q9BZ76 1288 aa18.85■□□□□ 0.61
CPNE1-204ENST00000397443 NUAK2Q9H093 628 aa18.85■□□□□ 0.61
CPNE1-204ENST00000397443 ASF1BQ9NVP2 202 aa18.85■□□□□ 0.61
CPNE1-204ENST00000397443 PSORS1C1Q9UIG5 152 aa18.85■□□□□ 0.61
CPNE1-204ENST00000397443 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.85■□□□□ 0.61
CPNE1-204ENST00000397443 RPL36Q9Y3U8 105 aaKnown RBP18.85■□□□□ 0.61
CPNE1-204ENST00000397443 A6NIZ1 184 aa18.84■□□□□ 0.61
CPNE1-204ENST00000397443 TGM6O95932 706 aa18.84■□□□□ 0.61
CPNE1-204ENST00000397443 MTNR1AP48039 350 aa18.84■□□□□ 0.61
CPNE1-204ENST00000397443 CLRN1P58418 232 aa18.84■□□□□ 0.61
CPNE1-204ENST00000397443 RAP1BP61224 184 aa18.84■□□□□ 0.61
CPNE1-204ENST00000397443 RAP1AP62834 184 aa18.84■□□□□ 0.61
CPNE1-204ENST00000397443 MVKQ03426 396 aa18.84■□□□□ 0.61
CPNE1-204ENST00000397443 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.84■□□□□ 0.61
CPNE1-204ENST00000397443 OR6V1Q8N148 313 aa18.84■□□□□ 0.61
CPNE1-204ENST00000397443 ZIC4Q8N9L1 334 aa18.84■□□□□ 0.61
CPNE1-204ENST00000397443 PROKR2Q8NFJ6 384 aa18.84■□□□□ 0.61
CPNE1-204ENST00000397443 RNF128Q8TEB7 428 aa18.84■□□□□ 0.61
CPNE1-204ENST00000397443 ZMYND19Q96E35 227 aaPredicted RBP18.84■□□□□ 0.61
CPNE1-204ENST00000397443 SF3B5Q9BWJ5 86 aaKnown RBP18.84■□□□□ 0.61
CPNE1-204ENST00000397443 PLCXD1Q9NUJ7 323 aa18.84■□□□□ 0.61
CPNE1-204ENST00000397443 FLVCR1Q9Y5Y0 555 aa18.84■□□□□ 0.61
CPNE1-204ENST00000397443 SLC22A23A1A5C7 686 aa18.84■□□□□ 0.61
CPNE1-204ENST00000397443 NPIPB13A6NJU9 1138 aa18.84■□□□□ 0.61
CPNE1-204ENST00000397443 SLC22A20A6NK97 555 aa18.84■□□□□ 0.61
CPNE1-204ENST00000397443 SNTNA6NMZ2 147 aa18.84■□□□□ 0.61
CPNE1-204ENST00000397443 NPIPB4C9JG80 1138 aa18.84■□□□□ 0.61
CPNE1-204ENST00000397443 SLC16A7O60669 478 aa18.84■□□□□ 0.61
CPNE1-204ENST00000397443 STSP08842 583 aa18.84■□□□□ 0.61
CPNE1-204ENST00000397443 MRPL3P09001 348 aaKnown RBP18.84■□□□□ 0.61
CPNE1-204ENST00000397443 HTR1FP30939 366 aa18.84■□□□□ 0.61
CPNE1-204ENST00000397443 CENPAP49450 140 aa18.84■□□□□ 0.61
CPNE1-204ENST00000397443 SELENOPP49908 381 aa18.84■□□□□ 0.61
CPNE1-204ENST00000397443 KLRB1Q12918 225 aa18.84■□□□□ 0.61
CPNE1-204ENST00000397443 POU4F3Q15319 338 aa18.84■□□□□ 0.61
CPNE1-204ENST00000397443 LYPD4Q6UWN0 246 aa18.84■□□□□ 0.61
CPNE1-204ENST00000397443 TEAD3Q99594 435 aa18.84■□□□□ 0.61
CPNE1-204ENST00000397443 NMNAT2Q9BZQ4 307 aa18.84■□□□□ 0.61
CPNE1-204ENST00000397443 CCDC182A6NF36 153 aa18.83■□□□□ 0.6
CPNE1-204ENST00000397443 GPANK1O95872 356 aa18.83■□□□□ 0.6
CPNE1-204ENST00000397443 TPOP07202 933 aa18.83■□□□□ 0.6
CPNE1-204ENST00000397443 SLC2A5P22732 501 aa18.83■□□□□ 0.6
CPNE1-204ENST00000397443 PTGS2P35354 604 aa18.83■□□□□ 0.6
CPNE1-204ENST00000397443 ATP6V1E1P36543 226 aa18.83■□□□□ 0.6
CPNE1-204ENST00000397443 CSNK2BP67870 215 aa18.83■□□□□ 0.6
CPNE1-204ENST00000397443 SLC35A2P78381 396 aa18.83■□□□□ 0.6
CPNE1-204ENST00000397443 ST3GAL4Q11206 333 aa18.83■□□□□ 0.6
CPNE1-204ENST00000397443 ZNF324BQ6AW86 544 aaPredicted RBP18.83■□□□□ 0.6
CPNE1-204ENST00000397443 GTF2IRD2BQ6EKJ0 949 aa18.83■□□□□ 0.6
CPNE1-204ENST00000397443 GTF2IRD2Q86UP8 949 aa18.83■□□□□ 0.6
CPNE1-204ENST00000397443 MCEMP1Q8IX19 187 aa18.83■□□□□ 0.6
CPNE1-204ENST00000397443 STX19Q8N4C7 294 aa18.83■□□□□ 0.6
CPNE1-204ENST00000397443 OR51G2Q8NGK0 314 aa18.83■□□□□ 0.6
CPNE1-204ENST00000397443 SLC25A44Q96H78 314 aaPredicted RBP18.83■□□□□ 0.6
CPNE1-204ENST00000397443 KCNK17Q96T54 332 aa18.83■□□□□ 0.6
CPNE1-204ENST00000397443 CACNA1BQ00975 2339 aa18.83■□□□□ 0.6
CPNE1-204ENST00000397443 ZGRF1Q86YA3 2104 aa18.83■□□□□ 0.6
CPNE1-204ENST00000397443 TTLL8A6PVC2 850 aa18.82■□□□□ 0.6
CPNE1-204ENST00000397443 IGHG1P01857 330 aa18.82■□□□□ 0.6
CPNE1-204ENST00000397443 HTR1AP08908 422 aa18.82■□□□□ 0.6
CPNE1-204ENST00000397443 CTLA4P16410 223 aa18.82■□□□□ 0.6
CPNE1-204ENST00000397443 C21orf33P30042 268 aaPredicted RBP18.82■□□□□ 0.6
CPNE1-204ENST00000397443 GSTT1P30711 240 aa18.82■□□□□ 0.6
CPNE1-204ENST00000397443 NTF4P34130 210 aa18.82■□□□□ 0.6
CPNE1-204ENST00000397443 ETFDHQ16134 617 aa18.82■□□□□ 0.6
CPNE1-204ENST00000397443 KRTCAP3Q53RY4 240 aa18.82■□□□□ 0.6
CPNE1-204ENST00000397443 OTPQ5XKR4 325 aa18.82■□□□□ 0.6
CPNE1-204ENST00000397443 FAM205BPQ63HN1 556 aa18.82■□□□□ 0.6
CPNE1-204ENST00000397443 TMEM154Q6P9G4 183 aa18.82■□□□□ 0.6
CPNE1-204ENST00000397443 P4HA3Q7Z4N8 544 aa18.82■□□□□ 0.6
CPNE1-204ENST00000397443 TUSC5Q8IXB3 177 aa18.82■□□□□ 0.6
CPNE1-204ENST00000397443 OR4F15Q8NGB8 312 aa18.82■□□□□ 0.6
CPNE1-204ENST00000397443 OR6X1Q8NH79 312 aa18.82■□□□□ 0.6
CPNE1-204ENST00000397443 SMAP2Q8WU79 429 aaPredicted RBP18.82■□□□□ 0.6
CPNE1-204ENST00000397443 NSMAFQ92636 917 aa18.82■□□□□ 0.6
CPNE1-204ENST00000397443 KISS1RQ969F8 398 aaPredicted RBP18.82■□□□□ 0.6
CPNE1-204ENST00000397443 CALHM2Q9HA72 323 aa18.82■□□□□ 0.6
CPNE1-204ENST00000397443 VSX1Q9NZR4 365 aaPredicted RBP18.82■□□□□ 0.6
CPNE1-204ENST00000397443 KLHL9Q9P2J3 617 aa18.82■□□□□ 0.6
CPNE1-204ENST00000397443 ING1Q9UK53 422 aaPredicted RBP18.82■□□□□ 0.6
CPNE1-204ENST00000397443 COMMD3-BMI1R4GMX3 469 aa18.82■□□□□ 0.6
CPNE1-204ENST00000397443 SMIM18P0DKX4 95 aa18.82■□□□□ 0.6
CPNE1-204ENST00000397443 LGALS3BPQ08380 585 aa18.82■□□□□ 0.6
CPNE1-204ENST00000397443 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.82■□□□□ 0.6
CPNE1-204ENST00000397443 NOXO1Q8NFA2 376 aa18.82■□□□□ 0.6
CPNE1-204ENST00000397443 LGALS12Q96DT0 336 aa18.82■□□□□ 0.6
CPNE1-204ENST00000397443 OR2M2Q96R28 347 aa18.82■□□□□ 0.6
CPNE1-204ENST00000397443 DUSP21Q9H596 190 aa18.82■□□□□ 0.6
CPNE1-204ENST00000397443 IGKV1D-43A0A0B4J1Z2 117 aa18.81■□□□□ 0.6
CPNE1-204ENST00000397443 OR14I1A6ND48 311 aa18.81■□□□□ 0.6
CPNE1-204ENST00000397443 EFCAB10A6NFE3 127 aa18.81■□□□□ 0.6
CPNE1-204ENST00000397443 SLC22A31A6NKX4 558 aa18.81■□□□□ 0.6
CPNE1-204ENST00000397443 RGS10O43665 173 aa18.81■□□□□ 0.6
CPNE1-204ENST00000397443 ADRA2AP08913 450 aa18.81■□□□□ 0.6
CPNE1-204ENST00000397443 PGA4P0DJD7 388 aa18.81■□□□□ 0.6
CPNE1-204ENST00000397443 PGA3P0DJD8 388 aa18.81■□□□□ 0.6
CPNE1-204ENST00000397443 TDGF1P3P51864 188 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms