RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 GPAT4Q86UL3 456 aa11.8□□□□□ -0.52
SEC13-209ENST00000397117 JAZF1Q86VZ6 243 aa11.8□□□□□ -0.52
SEC13-209ENST00000397117 KDM8Q8N371 416 aa11.8□□□□□ -0.52
SEC13-209ENST00000397117 OR52E2Q8NGJ4 325 aa11.8□□□□□ -0.52
SEC13-209ENST00000397117 OR4K13Q8NH42 304 aa11.8□□□□□ -0.52
SEC13-209ENST00000397117 DNAJC27Q9NZQ0 273 aa11.8□□□□□ -0.52
SEC13-209ENST00000397117 H2AFY2Q9P0M6 372 aaPredicted RBP11.8□□□□□ -0.52
SEC13-209ENST00000397117 TPRKBQ9Y3C4 175 aa11.8□□□□□ -0.52
SEC13-209ENST00000397117 LIPGQ9Y5X9 500 aa11.8□□□□□ -0.52
SEC13-209ENST00000397117 MED12Q93074 2177 aa11.8□□□□□ -0.52
SEC13-209ENST00000397117 TEX13CA0A0J9YWL9 993 aa11.79□□□□□ -0.52
SEC13-209ENST00000397117 A0A1W2PNV4 684 aa11.79□□□□□ -0.52
SEC13-209ENST00000397117 PRR23D1E9PI22 279 aaPredicted RBP11.79□□□□□ -0.52
SEC13-209ENST00000397117 H0YC42 278 aa11.79□□□□□ -0.52
SEC13-209ENST00000397117 SLC1A7O00341 560 aa11.79□□□□□ -0.52
SEC13-209ENST00000397117 CCDC159P0C7I6 412 aa11.79□□□□□ -0.52
SEC13-209ENST00000397117 PRR23D2P0DMB1 279 aaPredicted RBP11.79□□□□□ -0.52
SEC13-209ENST00000397117 ENPP1P22413 925 aa11.79□□□□□ -0.52
SEC13-209ENST00000397117 ACVR2AP27037 513 aa11.79□□□□□ -0.52
SEC13-209ENST00000397117 DAP3P51398 398 aaKnown RBP11.79□□□□□ -0.52
SEC13-209ENST00000397117 SUCLG1P53597 346 aaKnown RBP11.79□□□□□ -0.52
SEC13-209ENST00000397117 RPS3AP61247 264 aaKnown RBP11.79□□□□□ -0.52
SEC13-209ENST00000397117 EFNB1P98172 346 aa11.79□□□□□ -0.52
SEC13-209ENST00000397117 POU3F1Q03052 451 aaPredicted RBP11.79□□□□□ -0.52
SEC13-209ENST00000397117 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.79□□□□□ -0.52
SEC13-209ENST00000397117 C1DQ13901 141 aaKnown RBP11.79□□□□□ -0.52
SEC13-209ENST00000397117 BCL2A1Q16548 175 aa11.79□□□□□ -0.52
SEC13-209ENST00000397117 OCLNQ16625 522 aa11.79□□□□□ -0.52
SEC13-209ENST00000397117 KCTD21Q4G0X4 260 aa11.79□□□□□ -0.52
SEC13-209ENST00000397117 SLC25A30Q5SVS4 291 aa11.79□□□□□ -0.52
SEC13-209ENST00000397117 LAIR2Q6ISS4 152 aa11.79□□□□□ -0.52
SEC13-209ENST00000397117 CXXC5Q7LFL8 322 aaKnown RBP11.79□□□□□ -0.52
SEC13-209ENST00000397117 PXKQ7Z7A4 578 aa11.79□□□□□ -0.52
SEC13-209ENST00000397117 CPOQ8IVL8 374 aa11.79□□□□□ -0.52
SEC13-209ENST00000397117 UEVLDQ8IX04 471 aa11.79□□□□□ -0.52
SEC13-209ENST00000397117 OR10D3Q8NH80 312 aa11.79□□□□□ -0.52
SEC13-209ENST00000397117 FAM57AQ8TBR7 257 aa11.79□□□□□ -0.52
SEC13-209ENST00000397117 RFKQ969G6 155 aa11.79□□□□□ -0.52
SEC13-209ENST00000397117 ZNF566Q969W8 418 aa11.79□□□□□ -0.52
SEC13-209ENST00000397117 RASD2Q96D21 266 aa11.79□□□□□ -0.52
SEC13-209ENST00000397117 Q96M85 177 aa11.79□□□□□ -0.52
SEC13-209ENST00000397117 TSPAN32Q96QS1 320 aa11.79□□□□□ -0.52
SEC13-209ENST00000397117 TXNIPQ9H3M7 391 aa11.79□□□□□ -0.52
SEC13-209ENST00000397117 FN3KQ9H479 309 aa11.79□□□□□ -0.52
SEC13-209ENST00000397117 NPDC1Q9NQX5 325 aaPredicted RBP11.79□□□□□ -0.52
SEC13-209ENST00000397117 COQ3Q9NZJ6 369 aa11.79□□□□□ -0.52
SEC13-209ENST00000397117 ZNF346Q9UL40 294 aaKnown RBP11.79□□□□□ -0.52
SEC13-209ENST00000397117 RASD1Q9Y272 281 aa11.79□□□□□ -0.52
SEC13-209ENST00000397117 NOX1Q9Y5S8 564 aa11.79□□□□□ -0.52
SEC13-209ENST00000397117 ABCA4P78363 2273 aa11.79□□□□□ -0.52
SEC13-209ENST00000397117 FREM3P0C091 2139 aa11.79□□□□□ -0.52
SEC13-209ENST00000397117 PTGES3LE9PB15 166 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 XKRYO14609 159 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 XPNPEP2O43895 674 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 CXCL13O43927 109 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 VAMP5O95183 116 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 TXNDC12O95881 172 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 ZNF708P17019 499 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 CRHBPP24387 322 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 ART1P52961 327 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 NUDT6P53370 316 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 CLDN15P56746 228 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 CLDN18P56856 261 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 RPL27P61353 136 aaKnown RBP11.78□□□□□ -0.52
SEC13-209ENST00000397117 TFF3Q07654 80 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 ITGADQ13349 1161 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 KRR1Q13601 381 aaKnown RBP11.78□□□□□ -0.52
SEC13-209ENST00000397117 ACKR1Q16570 336 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 TMEM201Q5SNT2 666 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 VASNQ6EMK4 673 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 PLBD1Q6P4A8 553 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 CHMP1BQ7LBR1 199 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 FAM122BQ7Z309 247 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 BCDIN3DQ7Z5W3 292 aaKnown RBP11.78□□□□□ -0.52
SEC13-209ENST00000397117 ZNF540Q8NDQ6 660 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 SDR9C7Q8NEX9 313 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 LILRB4Q8NHJ6 448 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 ADGRG7Q96K78 797 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 ZNF582Q96NG8 517 aaPredicted RBP11.78□□□□□ -0.52
SEC13-209ENST00000397117 OXGR1Q96P68 337 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 TMUB1Q9BVT8 246 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 SRXN1Q9BYN0 137 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 PAQR5Q9NXK6 330 aaPredicted RBP11.78□□□□□ -0.52
SEC13-209ENST00000397117 IGHV3-15A0A0B4J1V0 119 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 FAM183AA6NL82 134 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 KDM4EB2RXH2 506 aaPredicted RBP11.78□□□□□ -0.52
SEC13-209ENST00000397117 PRODHO43272 600 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 TOXO94900 526 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 BCL10O95999 233 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 IGHG3P01860 377 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 IGHMP01871 453 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 IFNGR1P15260 489 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 ZNF43P17038 809 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 HOXB4P17483 251 aaPredicted RBP11.78□□□□□ -0.52
SEC13-209ENST00000397117 PTGS2P35354 604 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 ACVR1BP36896 505 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 P2RY4P51582 365 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 AGFG1P52594 562 aaKnown RBP11.78□□□□□ -0.52
SEC13-209ENST00000397117 H3F3AP84243 136 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 APOFQ13790 326 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms