RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 HERVK_113Q902F9 699 aa12.64□□□□□ -0.39
NUP98-204ENST00000397004 PHYHIPQ92561 330 aa12.64□□□□□ -0.39
NUP98-204ENST00000397004 CYYR1Q96J86 154 aa12.64□□□□□ -0.39
NUP98-204ENST00000397004 ZC3H10Q96K80 434 aaKnown RBP12.64□□□□□ -0.39
NUP98-204ENST00000397004 TBC1D3DA0A087WVF3 549 aa12.64□□□□□ -0.39
NUP98-204ENST00000397004 TBC1D3IA0A087WXS9 549 aa12.64□□□□□ -0.39
NUP98-204ENST00000397004 TBC1D3LB9A6J9 549 aa12.64□□□□□ -0.39
NUP98-204ENST00000397004 RASGRP1O95267 797 aa12.64□□□□□ -0.39
NUP98-204ENST00000397004 CELA2BP08218 269 aaPredicted RBP12.64□□□□□ -0.39
NUP98-204ENST00000397004 TBC1D3HP0C7X1 549 aa12.64□□□□□ -0.39
NUP98-204ENST00000397004 EN2P19622 333 aaPredicted RBP12.64□□□□□ -0.39
NUP98-204ENST00000397004 ACHEP22303 614 aa12.64□□□□□ -0.39
NUP98-204ENST00000397004 SORDQ00796 357 aa12.64□□□□□ -0.39
NUP98-204ENST00000397004 STX4Q12846 297 aa12.64□□□□□ -0.39
NUP98-204ENST00000397004 GAS6Q14393 721 aa12.64□□□□□ -0.39
NUP98-204ENST00000397004 ETFDHQ16134 617 aa12.64□□□□□ -0.39
NUP98-204ENST00000397004 MESTQ5EB52 335 aa12.64□□□□□ -0.39
NUP98-204ENST00000397004 TBC1D3CQ6IPX1 549 aa12.64□□□□□ -0.39
NUP98-204ENST00000397004 HDDC2Q7Z4H3 204 aa12.64□□□□□ -0.39
NUP98-204ENST00000397004 CDC20BQ86Y33 519 aa12.64□□□□□ -0.39
NUP98-204ENST00000397004 TBC1D3Q8IZP1 549 aaPredicted RBP12.64□□□□□ -0.39
NUP98-204ENST00000397004 TMEM106AQ96A25 262 aa12.64□□□□□ -0.39
NUP98-204ENST00000397004 ELF4Q99607 663 aaPredicted RBP12.64□□□□□ -0.39
NUP98-204ENST00000397004 RXFP3Q9NSD7 469 aa12.64□□□□□ -0.39
NUP98-204ENST00000397004 H3BUI4 141 aa12.63□□□□□ -0.39
NUP98-204ENST00000397004 DNASE2O00115 360 aaPredicted RBP12.63□□□□□ -0.39
NUP98-204ENST00000397004 SMAD9O15198 467 aaKnown RBP12.63□□□□□ -0.39
NUP98-204ENST00000397004 AP3S2P59780 193 aa12.63□□□□□ -0.39
NUP98-204ENST00000397004 BTG2P78543 158 aa12.63□□□□□ -0.39
NUP98-204ENST00000397004 GRM7Q14831 915 aa12.63□□□□□ -0.39
NUP98-204ENST00000397004 GSG1LQ6UXU4 331 aa12.63□□□□□ -0.39
NUP98-204ENST00000397004 C17orf107Q6ZR85 190 aa12.63□□□□□ -0.39
NUP98-204ENST00000397004 ABHD13Q7L211 337 aa12.63□□□□□ -0.39
NUP98-204ENST00000397004 RTL10Q7L3V2 364 aa12.63□□□□□ -0.39
NUP98-204ENST00000397004 OR2G2Q8NGZ5 317 aa12.63□□□□□ -0.39
NUP98-204ENST00000397004 OR8S1Q8NH09 359 aa12.63□□□□□ -0.39
NUP98-204ENST00000397004 MCHR2Q969V1 340 aa12.63□□□□□ -0.39
NUP98-204ENST00000397004 LDAHQ9H6V9 325 aa12.63□□□□□ -0.39
NUP98-204ENST00000397004 TCF7L1Q9HCS4 588 aa12.63□□□□□ -0.39
NUP98-204ENST00000397004 GGT3PA6NGU5 568 aa12.63□□□□□ -0.39
NUP98-204ENST00000397004 FAM74A7A6NL05 159 aa12.63□□□□□ -0.39
NUP98-204ENST00000397004 UBXN2BQ14CS0 331 aa12.63□□□□□ -0.39
NUP98-204ENST00000397004 FAM74A3Q4VXF1 159 aa12.63□□□□□ -0.39
NUP98-204ENST00000397004 SLC35D3Q5M8T2 416 aa12.63□□□□□ -0.39
NUP98-204ENST00000397004 ZNF595Q8IYB9 648 aa12.63□□□□□ -0.39
NUP98-204ENST00000397004 ZNF454Q8N9F8 522 aa12.63□□□□□ -0.39
NUP98-204ENST00000397004 NSMAFQ92636 917 aa12.63□□□□□ -0.39
NUP98-204ENST00000397004 GPX7Q96SL4 187 aaPredicted RBP12.63□□□□□ -0.39
NUP98-204ENST00000397004 TCEAL2Q9H3H9 227 aaPredicted RBP12.63□□□□□ -0.39
NUP98-204ENST00000397004 ZNF337Q9Y3M9 751 aa12.63□□□□□ -0.39
NUP98-204ENST00000397004 PNPP00491 289 aa12.63□□□□□ -0.39
NUP98-204ENST00000397004 RLN1P04808 185 aa12.63□□□□□ -0.39
NUP98-204ENST00000397004 PPP3CBP16298 524 aa12.63□□□□□ -0.39
NUP98-204ENST00000397004 DLX5P56178 289 aa12.63□□□□□ -0.39
NUP98-204ENST00000397004 KIR2DS3Q14952 304 aa12.63□□□□□ -0.39
NUP98-204ENST00000397004 TMEM196Q5HYL7 178 aa12.63□□□□□ -0.39
NUP98-204ENST00000397004 FAM122CQ6P4D5 195 aa12.63□□□□□ -0.39
NUP98-204ENST00000397004 DPY19L4Q7Z388 723 aa12.63□□□□□ -0.39
NUP98-204ENST00000397004 CLEC1AQ8NC01 280 aa12.63□□□□□ -0.39
NUP98-204ENST00000397004 EVA1AQ9H8M9 152 aa12.63□□□□□ -0.39
NUP98-204ENST00000397004 STEAP1Q9UHE8 339 aa12.63□□□□□ -0.39
NUP98-204ENST00000397004 PCOLCE2Q9UKZ9 415 aa12.63□□□□□ -0.39
NUP98-204ENST00000397004 LHX6Q9UPM6 363 aa12.63□□□□□ -0.39
NUP98-204ENST00000397004 ADH1BP00325 375 aa12.62□□□□□ -0.39
NUP98-204ENST00000397004 RBMS2Q15434 407 aaKnown RBP12.62□□□□□ -0.39
NUP98-204ENST00000397004 ANKRD16Q6P6B7 361 aa12.62□□□□□ -0.39
NUP98-204ENST00000397004 LSM14AQ8ND56 463 aaKnown RBP12.62□□□□□ -0.39
NUP98-204ENST00000397004 OR6N1Q8NGY5 312 aa12.62□□□□□ -0.39
NUP98-204ENST00000397004 BAHD1Q8TBE0 780 aaPredicted RBP12.62□□□□□ -0.39
NUP98-204ENST00000397004 LRFN5Q96NI6 719 aa12.62□□□□□ -0.39
NUP98-204ENST00000397004 MKKSQ9NPJ1 570 aaPredicted RBP12.62□□□□□ -0.39
NUP98-204ENST00000397004 FBXO4Q9UKT5 387 aa12.62□□□□□ -0.39
NUP98-204ENST00000397004 WIPF3A6NGB9 483 aa12.62□□□□□ -0.39
NUP98-204ENST00000397004 RP2O75695 350 aa12.62□□□□□ -0.39
NUP98-204ENST00000397004 CLPSP04118 112 aa12.62□□□□□ -0.39
NUP98-204ENST00000397004 CSF2RBP32927 897 aa12.62□□□□□ -0.39
NUP98-204ENST00000397004 SLC16A9Q7RTY1 509 aa12.62□□□□□ -0.39
NUP98-204ENST00000397004 CAMKVQ8NCB2 501 aa12.62□□□□□ -0.39
NUP98-204ENST00000397004 DUSP19Q8WTR2 217 aa12.62□□□□□ -0.39
NUP98-204ENST00000397004 PRDM9Q9NQV7 894 aa12.62□□□□□ -0.39
NUP98-204ENST00000397004 POLE3Q9NRF9 147 aa12.62□□□□□ -0.39
NUP98-204ENST00000397004 GDE1Q9NZC3 331 aa12.62□□□□□ -0.39
NUP98-204ENST00000397004 AKAP7Q9P0M2 348 aaPredicted RBP12.62□□□□□ -0.39
NUP98-204ENST00000397004 FBXL21Q9UKT6 434 aa12.62□□□□□ -0.39
NUP98-204ENST00000397004 KCNAB3O43448 404 aa12.62□□□□□ -0.39
NUP98-204ENST00000397004 ITGA10O75578 1167 aa12.62□□□□□ -0.39
NUP98-204ENST00000397004 AK1P00568 194 aa12.62□□□□□ -0.39
NUP98-204ENST00000397004 SLC35E2P0CK97 266 aa12.62□□□□□ -0.39
NUP98-204ENST00000397004 GLULP15104 373 aa12.62□□□□□ -0.39
NUP98-204ENST00000397004 ZNF74Q16587 644 aa12.62□□□□□ -0.39
NUP98-204ENST00000397004 CDH26Q8IXH8 852 aa12.62□□□□□ -0.39
NUP98-204ENST00000397004 KTI12Q96EK9 354 aaPredicted RBP12.62□□□□□ -0.39
NUP98-204ENST00000397004 ADAD1Q96M93 576 aaKnown RBP12.62□□□□□ -0.39
NUP98-204ENST00000397004 LPAR4Q99677 370 aa12.62□□□□□ -0.39
NUP98-204ENST00000397004 AIFM2Q9BRQ8 373 aa12.62□□□□□ -0.39
NUP98-204ENST00000397004 TMEM106CQ9BVX2 250 aa12.62□□□□□ -0.39
NUP98-204ENST00000397004 HEBP2Q9Y5Z4 205 aa12.62□□□□□ -0.39
NUP98-204ENST00000397004 A0A1W2PQF6 199 aa12.61□□□□□ -0.39
NUP98-204ENST00000397004 F5H5P2 479 aa12.61□□□□□ -0.39
NUP98-204ENST00000397004 ALOX12BO75342 701 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms