RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 Q8N402 240 aa13.47□□□□□ -0.25
CBX3-202ENST00000396386 CELF2-AS1Q8N7Q2 184 aa13.47□□□□□ -0.25
CBX3-202ENST00000396386 SAMD12Q8N8I0 201 aa13.47□□□□□ -0.25
CBX3-202ENST00000396386 ZNF248Q8NDW4 579 aa13.47□□□□□ -0.25
CBX3-202ENST00000396386 RELTQ969Z4 430 aa13.47□□□□□ -0.25
CBX3-202ENST00000396386 NXPE2Q96DL1 559 aa13.47□□□□□ -0.25
CBX3-202ENST00000396386 ZNF700Q9H0M5 742 aa13.47□□□□□ -0.25
CBX3-202ENST00000396386 SLC39A1Q9NY26 324 aa13.47□□□□□ -0.25
CBX3-202ENST00000396386 TEKT2Q9UIF3 430 aa13.47□□□□□ -0.25
CBX3-202ENST00000396386 IGLV1-36A0A0B4J1U3 117 aa13.46□□□□□ -0.25
CBX3-202ENST00000396386 LINC00854A0A1B0GVQ3 168 aa13.46□□□□□ -0.25
CBX3-202ENST00000396386 A6NIZ1 184 aa13.46□□□□□ -0.25
CBX3-202ENST00000396386 FAM47E-STBD1D6RA91 191 aa13.46□□□□□ -0.25
CBX3-202ENST00000396386 DKK1O94907 266 aa13.46□□□□□ -0.25
CBX3-202ENST00000396386 HLA-DQA2P01906 255 aa13.46□□□□□ -0.25
CBX3-202ENST00000396386 TFPIP10646 304 aa13.46□□□□□ -0.25
CBX3-202ENST00000396386 COX6A1P12074 109 aa13.46□□□□□ -0.25
CBX3-202ENST00000396386 ALOX5APP20292 161 aa13.46□□□□□ -0.25
CBX3-202ENST00000396386 RBMS1P29558 406 aaKnown RBP13.46□□□□□ -0.25
CBX3-202ENST00000396386 DAP3P51398 398 aaKnown RBP13.46□□□□□ -0.25
CBX3-202ENST00000396386 RAP1BP61224 184 aa13.46□□□□□ -0.25
CBX3-202ENST00000396386 RAP1AP62834 184 aa13.46□□□□□ -0.25
CBX3-202ENST00000396386 INSM1Q01101 510 aaPredicted RBP13.46□□□□□ -0.25
CBX3-202ENST00000396386 ALKBH1Q13686 389 aaKnown RBP13.46□□□□□ -0.25
CBX3-202ENST00000396386 LIPNQ5VXI9 398 aa13.46□□□□□ -0.25
CBX3-202ENST00000396386 DPY19L4Q7Z388 723 aa13.46□□□□□ -0.25
CBX3-202ENST00000396386 OTOSQ8NHW6 89 aa13.46□□□□□ -0.25
CBX3-202ENST00000396386 RNF166Q96A37 237 aaPredicted RBP13.46□□□□□ -0.25
CBX3-202ENST00000396386 SMAD5Q99717 465 aaKnown RBP13.46□□□□□ -0.25
CBX3-202ENST00000396386 CHST11Q9NPF2 352 aa13.46□□□□□ -0.25
CBX3-202ENST00000396386 CYSLTR2Q9NS75 346 aa13.46□□□□□ -0.25
CBX3-202ENST00000396386 ALKBH4Q9NXW9 302 aa13.46□□□□□ -0.25
CBX3-202ENST00000396386 B3GALT1Q9Y5Z6 326 aa13.46□□□□□ -0.25
CBX3-202ENST00000396386 A0A1W2PPK0 400 aa13.46□□□□□ -0.26
CBX3-202ENST00000396386 SLC22A23A1A5C7 686 aa13.46□□□□□ -0.26
CBX3-202ENST00000396386 ANKRD61A6NGH8 418 aa13.46□□□□□ -0.26
CBX3-202ENST00000396386 NPIPB13A6NJU9 1138 aa13.46□□□□□ -0.26
CBX3-202ENST00000396386 B4E171 279 aa13.46□□□□□ -0.26
CBX3-202ENST00000396386 NPIPB4C9JG80 1138 aa13.46□□□□□ -0.26
CBX3-202ENST00000396386 NPIPA5E9PKD4 350 aa13.46□□□□□ -0.26
CBX3-202ENST00000396386 TP53I11O14683 189 aa13.46□□□□□ -0.26
CBX3-202ENST00000396386 SLC16A7O60669 478 aa13.46□□□□□ -0.26
CBX3-202ENST00000396386 ZFPL1O95159 310 aa13.46□□□□□ -0.26
CBX3-202ENST00000396386 GPANK1O95872 356 aa13.46□□□□□ -0.26
CBX3-202ENST00000396386 EIF4EP06730 217 aaKnown RBP13.46□□□□□ -0.26
CBX3-202ENST00000396386 TSPAN7P41732 249 aa13.46□□□□□ -0.26
CBX3-202ENST00000396386 FAM205BPQ63HN1 556 aa13.46□□□□□ -0.26
CBX3-202ENST00000396386 H1FNTQ75WM6 255 aaPredicted RBP13.46□□□□□ -0.26
CBX3-202ENST00000396386 SPATC1Q76KD6 591 aa13.46□□□□□ -0.26
CBX3-202ENST00000396386 ZBTB44Q8NCP5 570 aa13.46□□□□□ -0.26
CBX3-202ENST00000396386 C19orf18Q8NEA5 215 aa13.46□□□□□ -0.26
CBX3-202ENST00000396386 OR2M3Q8NG83 312 aa13.46□□□□□ -0.26
CBX3-202ENST00000396386 OR2Y1Q8NGV0 311 aa13.46□□□□□ -0.26
CBX3-202ENST00000396386 THEM6Q8WUY1 208 aa13.46□□□□□ -0.26
CBX3-202ENST00000396386 ASB10Q8WXI3 467 aa13.46□□□□□ -0.26
CBX3-202ENST00000396386 HSD17B8Q92506 261 aa13.46□□□□□ -0.26
CBX3-202ENST00000396386 RGP1Q92546 391 aaPredicted RBP13.46□□□□□ -0.26
CBX3-202ENST00000396386 ARL5BQ96KC2 179 aa13.46□□□□□ -0.26
CBX3-202ENST00000396386 POTEKPQ9BYX7 375 aa13.46□□□□□ -0.26
CBX3-202ENST00000396386 NOX4Q9NPH5 578 aa13.46□□□□□ -0.26
CBX3-202ENST00000396386 B3GAT2Q9NPZ5 323 aa13.46□□□□□ -0.26
CBX3-202ENST00000396386 AKAP7Q9P0M2 348 aaPredicted RBP13.46□□□□□ -0.26
CBX3-202ENST00000396386 ABRACLQ9P1F3 81 aa13.46□□□□□ -0.26
CBX3-202ENST00000396386 NPIPA1Q9UND3 350 aa13.46□□□□□ -0.26
CBX3-202ENST00000396386 PDCD5O14737 125 aa13.45□□□□□ -0.26
CBX3-202ENST00000396386 ITGA10O75578 1167 aa13.45□□□□□ -0.26
CBX3-202ENST00000396386 CTLA4P16410 223 aa13.45□□□□□ -0.26
CBX3-202ENST00000396386 NPR2P20594 1047 aa13.45□□□□□ -0.26
CBX3-202ENST00000396386 CRABP1P29762 137 aa13.45□□□□□ -0.26
CBX3-202ENST00000396386 FOLR3P41439 243 aa13.45□□□□□ -0.26
CBX3-202ENST00000396386 CASP3P42574 277 aa13.45□□□□□ -0.26
CBX3-202ENST00000396386 TLE3Q04726 772 aa13.45□□□□□ -0.26
CBX3-202ENST00000396386 ZNF528Q3MIS6 628 aa13.45□□□□□ -0.26
CBX3-202ENST00000396386 TCEAL6Q6IPX3 200 aa13.45□□□□□ -0.26
CBX3-202ENST00000396386 DNM1P34Q6PK57 102 aa13.45□□□□□ -0.26
CBX3-202ENST00000396386 ZNF517Q6ZMY9 492 aaPredicted RBP13.45□□□□□ -0.26
CBX3-202ENST00000396386 OR4M1Q8NGD0 313 aa13.45□□□□□ -0.26
CBX3-202ENST00000396386 OR5AK2Q8NH90 309 aa13.45□□□□□ -0.26
CBX3-202ENST00000396386 ASB17Q8WXJ9 295 aa13.45□□□□□ -0.26
CBX3-202ENST00000396386 HPS1Q92902 700 aa13.45□□□□□ -0.26
CBX3-202ENST00000396386 TCEAL3Q969E4 200 aa13.45□□□□□ -0.26
CBX3-202ENST00000396386 IMMP1LQ96LU5 166 aa13.45□□□□□ -0.26
CBX3-202ENST00000396386 C5orf34Q96MH7 638 aa13.45□□□□□ -0.26
CBX3-202ENST00000396386 DERL3Q96Q80 235 aa13.45□□□□□ -0.26
CBX3-202ENST00000396386 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.45□□□□□ -0.26
CBX3-202ENST00000396386 C11orf54Q9H0W9 315 aaPredicted RBP13.45□□□□□ -0.26
CBX3-202ENST00000396386 SERINC1Q9NRX5 453 aa13.45□□□□□ -0.26
CBX3-202ENST00000396386 KCNG2Q9UJ96 466 aa13.45□□□□□ -0.26
CBX3-202ENST00000396386 HS3ST3B1Q9Y662 390 aa13.45□□□□□ -0.26
CBX3-202ENST00000396386 PIEZO1Q92508 2521 aa13.45□□□□□ -0.26
CBX3-202ENST00000396386 TEX51A0A1B0GUA7 166 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 ACOD1A6NK06 481 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 LIPT2A6NK58 231 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 SHISA8B8ZZ34 492 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 MS4A18H0YCH9 400 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 H3BML4 177 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 KLF7O75840 302 aaPredicted RBP13.44□□□□□ -0.26
CBX3-202ENST00000396386 SP9P0CG40 484 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 EPXP11678 715 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 PSKH1P11801 424 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms