RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 COQ3Q9NZJ6 369 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 CCL26Q9Y258 94 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 TMED7-TICAM2A0A0A6YYA0 188 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 HSPB2A8KAH6 182 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 VAMP5O95183 116 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 CD53P19397 219 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 ADPRHP54922 357 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 SLC10A1Q14973 349 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 HSPB2Q16082 182 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 DUSP6Q16828 381 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 AFMIDQ63HM1 303 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 STEAP1BQ6NZ63 245 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 OR52N1Q8NH53 320 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 BOD1Q96IK1 185 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 ZNF583Q96ND8 569 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 TNFRSF13CQ96RJ3 184 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 SAMD10Q9BYL1 202 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 TWSG1Q9GZX9 223 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 HRH4Q9H3N8 390 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 ZCCHC4Q9H5U6 513 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 CXXC1Q9P0U4 656 aaPredicted RBP5.04□□□□□ -1.6
VPS13C-204ENST00000395898 GMPR2Q9P2T1 348 aaKnown RBP5.04□□□□□ -1.6
VPS13C-204ENST00000395898 THAP10Q9P2Z0 257 aaPredicted RBP5.04□□□□□ -1.6
VPS13C-204ENST00000395898 TMED7Q9Y3B3 224 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 LINC01553A4QN01 128 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 ZNF814B7Z6K7 855 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 HSPB6O14558 160 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 TGM6O95932 706 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 GM2AP17900 193 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 TRHRP34981 398 aaPredicted RBP5.03□□□□□ -1.6
VPS13C-204ENST00000395898 GALEQ14376 348 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 CST9LP1Q5W188 147 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 NMNAT3Q96T66 252 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 CXorf36Q9H7Y0 433 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 WASH6PQ9NQA3 447 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 PAPPA2Q9BXP8 1791 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 TNRC6CQ9HCJ0 1690 aaKnown RBP5.03□□□□□ -1.6
VPS13C-204ENST00000395898 TRDV1A0A1B0GX56 115 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 GSTP1P09211 210 aaKnown RBP5.03□□□□□ -1.6
VPS13C-204ENST00000395898 GNB3P16520 340 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 ANXA7P20073 488 aaKnown RBP5.03□□□□□ -1.6
VPS13C-204ENST00000395898 ANKRD33Q7Z3H0 272 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 CACFD1Q9UGQ2 172 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 DIMT1Q9UNQ2 313 aaKnown RBP5.03□□□□□ -1.6
VPS13C-204ENST00000395898 MRPS28Q9Y2Q9 187 aaKnown RBP5.03□□□□□ -1.6
VPS13C-204ENST00000395898 SPINT2O43291 252 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 NSA2O95478 260 aaKnown RBP5.03□□□□□ -1.6
VPS13C-204ENST00000395898 KLKB1P03952 638 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 GLULP15104 373 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 MAKP20794 623 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 CSNK1EP49674 416 aaKnown RBP5.03□□□□□ -1.6
VPS13C-204ENST00000395898 FOXK2Q01167 660 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 EGR3Q06889 387 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 Q6ZSR9 355 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 ADGRE4PQ86SQ3 457 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 SKA3Q8IX90 412 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 DNAJC5GQ8N7S2 189 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 PNPLA1Q8N8W4 532 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 OR10J5Q8NHC4 309 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 LYSMD1Q96S90 227 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 OR52A5Q9H2C5 316 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 DHCR7Q9UBM7 475 aaKnown RBP5.03□□□□□ -1.6
VPS13C-204ENST00000395898 PRAMEF25A6NGN4 478 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 ZNF749O43361 778 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 DEFA4P12838 97 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 SSTP61278 116 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 DUSP8Q13202 625 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 DOC2BQ14184 412 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 OR8B8Q15620 311 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 OR2G6Q5TZ20 316 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 C18orf63Q68DL7 685 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 MFSD12Q6NUT3 480 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 H1FNTQ75WM6 255 aaPredicted RBP5.03□□□□□ -1.6
VPS13C-204ENST00000395898 SLC35D2Q76EJ3 337 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 ZNF740Q8NDX6 193 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 SLC37A2Q8TED4 501 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 PLEKHF2Q9H8W4 249 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 CALHM2Q9HA72 323 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 MARCH5Q9NX47 278 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 ABCA3Q99758 1704 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 ELK1P19419 428 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 KIR2DL3P43628 341 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 TPMTP51580 245 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 LIM2P55344 173 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 CGB2Q6NT52 195 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 SPRED1Q7Z699 444 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 RBMXL3Q8N7X1 1067 aaKnown RBP5.03□□□□□ -1.6
VPS13C-204ENST00000395898 SEC22CQ9BRL7 303 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 SAV1Q9H4B6 383 aaPredicted RBP5.03□□□□□ -1.6
VPS13C-204ENST00000395898 AGPAT2O15120 278 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 HLA-HP01893 362 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 PTGER1P34995 402 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 SEMA3BQ13214 749 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 DYRK1AQ13627 763 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 GLYR1Q49A26 553 aaPredicted RBP5.03□□□□□ -1.6
VPS13C-204ENST00000395898 GLYATL3Q5SZD4 288 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 TRNP1Q6NT89 227 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 LSMEM2Q8N112 164 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 TMEM255BQ8WV15 326 aa5.03□□□□□ -1.6
VPS13C-204ENST00000395898 SECTM1Q8WVN6 248 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms