RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 SPNS1Q9H2V7 528 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 CHST11Q9NPF2 352 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 NRIP3Q9NQ35 241 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 IGKV1-8A0A0C4DH67 115 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 PRSS44E7EML9 344 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 DDAH2O95865 285 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 RECKO95980 971 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 RLN1P04808 185 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 CPT2P23786 658 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 OR2B6P58173 313 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 METTL11BQ5VVY1 283 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 TIGD3Q6B0B8 471 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 DPY19L4Q7Z388 723 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 CLIP4Q8N3C7 705 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 OR4C3Q8NH37 302 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 M1APQ8TC57 530 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 SLC25A44Q96H78 314 aaPredicted RBP3.09□□□□□ -1.91
VPS13C-203ENST00000395896 FAM210AQ96ND0 272 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF285Q96NJ3 590 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 NUDT22Q9BRQ3 303 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 GLRX2Q9NS18 164 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 RCE1Q9Y256 329 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 CEPT1Q9Y6K0 416 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 ANKRD33BA6NCL7 494 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 TRIM64CA6NLI5 447 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 PRKACBP22694 351 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF169Q14929 603 aaPredicted RBP3.09□□□□□ -1.91
VPS13C-203ENST00000395896 RIPPLY2Q5TAB7 128 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 LPCAT3Q6P1A2 487 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 SERPINA12Q8IW75 414 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 ZSCAN4Q8NAM6 433 aaPredicted RBP3.09□□□□□ -1.91
VPS13C-203ENST00000395896 SIMC1Q8NDZ2 872 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 MACROD1Q9BQ69 325 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 SNX11Q9Y5W9 270 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 PRSS37A4D1T9 235 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 RFPL3O75679 317 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 CALCBP10092 127 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 SRMP19623 302 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 RAB3AP20336 220 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 PVALBP20472 110 aaPredicted RBP3.09□□□□□ -1.91
VPS13C-203ENST00000395896 COL9A1P20849 921 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 UCNP55089 124 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 CARD18P57730 90 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 RAB2AP61019 212 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 ACSM1Q08AH1 577 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 CCBE1Q6UXH8 406 aaPredicted RBP3.09□□□□□ -1.91
VPS13C-203ENST00000395896 OR56B1Q8NGI3 324 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 GGHQ92820 318 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 ARHGDIGQ99819 225 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 MRPS18AQ9NVS2 196 aaKnown RBP3.09□□□□□ -1.91
VPS13C-203ENST00000395896 EXO1Q9UQ84 846 aaKnown RBP3.09□□□□□ -1.91
VPS13C-203ENST00000395896 NAT2P11245 290 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 POLR2IP36954 125 aaKnown RBP3.09□□□□□ -1.91
VPS13C-203ENST00000395896 LSM6P62312 80 aaKnown RBP3.09□□□□□ -1.91
VPS13C-203ENST00000395896 ARHGEF39Q8N4T4 335 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 TEX19Q8NA77 164 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 THAP3Q8WTV1 239 aaPredicted RBP3.09□□□□□ -1.91
VPS13C-203ENST00000395896 HTRA1Q92743 480 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 ARSGQ96EG1 525 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 MENTQ9BUN1 341 aa3.09□□□□□ -1.91
VPS13C-203ENST00000395896 SOX17Q9H6I2 414 aaPredicted RBP3.09□□□□□ -1.91
VPS13C-203ENST00000395896 PMS2P1A4D2B8 440 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 FAM183AA6NL82 134 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 KDM4EB2RXH2 506 aaPredicted RBP3.09□□□□□ -1.92
VPS13C-203ENST00000395896 SULT1C2O00338 296 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 MITFO75030 526 aaPredicted RBP3.09□□□□□ -1.92
VPS13C-203ENST00000395896 SLC43A1O75387 559 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 IFNA21P01568 189 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 SRD5A2P31213 254 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 MAP2K3P46734 347 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF133P52736 654 aaPredicted RBP3.09□□□□□ -1.92
VPS13C-203ENST00000395896 FOXK1P85037 733 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF385BQ569K4 471 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 DCDC5Q6ZRR9 648 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 ADPRHL1Q8NDY3 354 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 HPS1Q92902 700 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF501Q96CX3 271 aaPredicted RBP3.09□□□□□ -1.92
VPS13C-203ENST00000395896 PGAM5Q96HS1 289 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 SLC6A17Q9H1V8 727 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 TXNL4BQ9NX01 149 aaKnown RBP3.09□□□□□ -1.92
VPS13C-203ENST00000395896 LRFN1Q9P244 771 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 MBD2Q9UBB5 411 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 STATHP02808 62 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 SRPXP78539 464 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF836Q6ZNA1 936 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 CMTM1Q8IZ96 169 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 UBE2J2Q8N2K1 259 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 DEFB119Q8N690 84 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 DTWD2Q8NBA8 298 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 CHST4Q8NCG5 386 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 OR5T3Q8NGG3 340 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 TMEM255BQ8WV15 326 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 LIN37Q96GY3 246 aaPredicted RBP3.09□□□□□ -1.92
VPS13C-203ENST00000395896 UQCC2Q9BRT2 126 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 ELOVL3Q9HB03 270 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 NPAP1Q9NZP6 1156 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 PILRBQ9UKJ0 227 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 PPIEQ9UNP9 301 aaKnown RBP3.09□□□□□ -1.92
VPS13C-203ENST00000395896 WDFY4Q6ZS81 3184 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 hCG_2014768A0A024R1R8 64 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms