RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 UNQ9370/PRO34162Q6UXP9 181 aa12.62□□□□□ -0.39
SNCA-204ENST00000394989 ANKRD37Q7Z713 158 aa12.62□□□□□ -0.39
SNCA-204ENST00000394989 ANGPTL6Q8NI99 470 aa12.62□□□□□ -0.39
SNCA-204ENST00000394989 RBFOX1Q9NWB1 397 aaKnown RBP12.62□□□□□ -0.39
SNCA-204ENST00000394989 MRM2Q9UI43 246 aaKnown RBP12.62□□□□□ -0.39
SNCA-204ENST00000394989 NPFFR2Q9Y5X5 522 aa12.62□□□□□ -0.39
SNCA-204ENST00000394989 IGHV5-10-1A0A0J9YXX1 117 aa12.62□□□□□ -0.39
SNCA-204ENST00000394989 ATP6V1G2-DDX39BF2Z307 99 aa12.62□□□□□ -0.39
SNCA-204ENST00000394989 UPK3AO75631 287 aa12.62□□□□□ -0.39
SNCA-204ENST00000394989 ANKRD34CP0C6C1 535 aa12.62□□□□□ -0.39
SNCA-204ENST00000394989 RPS27P42677 84 aaKnown RBP12.62□□□□□ -0.39
SNCA-204ENST00000394989 MAP2K3P46734 347 aa12.62□□□□□ -0.39
SNCA-204ENST00000394989 SQSTM1Q13501 440 aa12.62□□□□□ -0.39
SNCA-204ENST00000394989 NKAIN1Q4KMZ8 207 aa12.62□□□□□ -0.39
SNCA-204ENST00000394989 LAMTOR1Q6IAA8 161 aa12.62□□□□□ -0.39
SNCA-204ENST00000394989 OR5M10Q6IEU7 315 aa12.62□□□□□ -0.39
SNCA-204ENST00000394989 RABEPKQ7Z6M1 372 aa12.62□□□□□ -0.39
SNCA-204ENST00000394989 CDC20BQ86Y33 519 aa12.62□□□□□ -0.39
SNCA-204ENST00000394989 THAP3Q8WTV1 239 aaPredicted RBP12.62□□□□□ -0.39
SNCA-204ENST00000394989 ABHD1Q96SE0 405 aa12.62□□□□□ -0.39
SNCA-204ENST00000394989 GFI1Q99684 422 aa12.62□□□□□ -0.39
SNCA-204ENST00000394989 SLC7A5P2Q9GIP4 190 aa12.62□□□□□ -0.39
SNCA-204ENST00000394989 WDR76Q9H967 626 aa12.62□□□□□ -0.39
SNCA-204ENST00000394989 ANKRD10Q9NXR5 420 aa12.62□□□□□ -0.39
SNCA-204ENST00000394989 A0A1B0GTQ1 180 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 C11orf98E9PRG8 122 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 SUSD5O60279 629 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 AKR7A3O95154 331 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 HIST1H2ABP04908 130 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 OR8G3PP0DMU2 310 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 HIST3H2AQ7L7L0 130 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 PM20D2Q8IYS1 436 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 HIST1H2ACQ93077 130 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 SLC25A36Q96CQ1 311 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 ZC3HAV1LQ96H79 300 aaKnown RBP12.61□□□□□ -0.39
SNCA-204ENST00000394989 DPCDQ9BVM2 203 aaPredicted RBP12.61□□□□□ -0.39
SNCA-204ENST00000394989 TMED7-TICAM2A0A0A6YYA0 188 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 C2orf72A6NCS6 295 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 TMEM200CA6NKL6 621 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 LYRM1O43325 122 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 GATBO75879 557 aaKnown RBP12.61□□□□□ -0.39
SNCA-204ENST00000394989 ABHD16AO95870 558 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 GP1BBP13224 206 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 SNRPBP14678 240 aaKnown RBP12.61□□□□□ -0.39
SNCA-204ENST00000394989 RBMS1P29558 406 aaKnown RBP12.61□□□□□ -0.39
SNCA-204ENST00000394989 FBXW4P57775 412 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 SNTA1Q13424 505 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 EEF1A1P5Q5VTE0 462 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 PMS2CLQ68D20 193 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 UPRTQ96BW1 309 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 DUSP23Q9BVJ7 150 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 OR11A1Q9GZK7 315 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 SYNDIG1Q9H7V2 258 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 NOX4Q9NPH5 578 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 PILRBQ9UKJ0 227 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 TMED7Q9Y3B3 224 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 AK6Q9Y3D8 172 aaKnown RBP12.61□□□□□ -0.39
SNCA-204ENST00000394989 ACOD1A6NK06 481 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 SCRG1O75711 98 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 ARL6IP5O75915 188 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 PLGP00747 810 aaPredicted RBP12.61□□□□□ -0.39
SNCA-204ENST00000394989 PDGFBP01127 241 aaPredicted RBP12.61□□□□□ -0.39
SNCA-204ENST00000394989 FCER2P06734 321 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 POLR2HP52434 150 aaKnown RBP12.61□□□□□ -0.39
SNCA-204ENST00000394989 NR0B2Q15466 257 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 OTPQ5XKR4 325 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 ZNF385CQ66K41 422 aaPredicted RBP12.61□□□□□ -0.39
SNCA-204ENST00000394989 LCN10Q6JVE6 187 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 GALNT11Q8NCW6 608 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 DUSP18Q8NEJ0 188 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 WDR77Q9BQA1 342 aaPredicted RBP12.61□□□□□ -0.39
SNCA-204ENST00000394989 B3GNT4Q9C0J1 378 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 TSPAN10Q9H1Z9 355 aaPredicted RBP12.61□□□□□ -0.39
SNCA-204ENST00000394989 ZC4H2Q9NQZ6 224 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 CLEC4AQ9UMR7 237 aa12.61□□□□□ -0.39
SNCA-204ENST00000394989 ADAMTS9Q9P2N4 1935 aa12.6□□□□□ -0.39
SNCA-204ENST00000394989 FZD7O75084 574 aa12.6□□□□□ -0.39
SNCA-204ENST00000394989 PITPNBP48739 271 aa12.6□□□□□ -0.39
SNCA-204ENST00000394989 ACY1Q03154 408 aa12.6□□□□□ -0.39
SNCA-204ENST00000394989 COL28A1Q2UY09 1125 aa12.6□□□□□ -0.39
SNCA-204ENST00000394989 HLA-BQ31612 363 aa12.6□□□□□ -0.39
SNCA-204ENST00000394989 LIPNQ5VXI9 398 aa12.6□□□□□ -0.39
SNCA-204ENST00000394989 OR2T4Q8NH00 348 aa12.6□□□□□ -0.39
SNCA-204ENST00000394989 GUCD1Q96NT3 240 aa12.6□□□□□ -0.39
SNCA-204ENST00000394989 MFRPQ9BY79 579 aa12.6□□□□□ -0.39
SNCA-204ENST00000394989 HDHD2Q9H0R4 259 aa12.6□□□□□ -0.39
SNCA-204ENST00000394989 APMAPQ9HDC9 416 aa12.6□□□□□ -0.39
SNCA-204ENST00000394989 FLRT2O43155 660 aa12.6□□□□□ -0.39
SNCA-204ENST00000394989 GPRIN2O60269 458 aa12.6□□□□□ -0.39
SNCA-204ENST00000394989 RPP14O95059 124 aaKnown RBP12.6□□□□□ -0.39
SNCA-204ENST00000394989 PRKACAP17612 351 aa12.6□□□□□ -0.39
SNCA-204ENST00000394989 SRMP19623 302 aa12.6□□□□□ -0.39
SNCA-204ENST00000394989 SGCBQ16585 318 aa12.6□□□□□ -0.39
SNCA-204ENST00000394989 FAM69AQ5T7M9 428 aa12.6□□□□□ -0.39
SNCA-204ENST00000394989 GPR139Q6DWJ6 353 aa12.6□□□□□ -0.39
SNCA-204ENST00000394989 IDO2Q6ZQW0 420 aa12.6□□□□□ -0.39
SNCA-204ENST00000394989 FRRS1LQ9P0K9 344 aa12.6□□□□□ -0.39
SNCA-204ENST00000394989 ING1Q9UK53 422 aaPredicted RBP12.6□□□□□ -0.39
SNCA-204ENST00000394989 MGAT4AQ9UM21 535 aa12.6□□□□□ -0.39
SNCA-204ENST00000394989 ZNF281Q9Y2X9 895 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms