RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 A0A0A6YYC8 382 aaPredicted RBP16.66■□□□□ 0.26
PCDHA1-202ENST00000394633 OR2W5A6NFC9 320 aa16.66■□□□□ 0.26
PCDHA1-202ENST00000394633 I3L1I5 382 aaPredicted RBP16.66■□□□□ 0.26
PCDHA1-202ENST00000394633 SUSD5O60279 629 aa16.66■□□□□ 0.26
PCDHA1-202ENST00000394633 MAS1P04201 325 aa16.66■□□□□ 0.26
PCDHA1-202ENST00000394633 UBL4AP11441 157 aa16.66■□□□□ 0.26
PCDHA1-202ENST00000394633 HNRNPA2B1P22626 353 aaKnown RBP16.66■□□□□ 0.26
PCDHA1-202ENST00000394633 GRK6P43250 576 aa16.66■□□□□ 0.26
PCDHA1-202ENST00000394633 CTXN1P60606 82 aa16.66■□□□□ 0.26
PCDHA1-202ENST00000394633 ZNF74Q16587 644 aa16.66■□□□□ 0.26
PCDHA1-202ENST00000394633 SFRP5Q5T4F7 317 aa16.66■□□□□ 0.26
PCDHA1-202ENST00000394633 PRSS42Q7Z5A4 293 aa16.66■□□□□ 0.26
PCDHA1-202ENST00000394633 GLB1L2Q8IW92 636 aa16.66■□□□□ 0.26
PCDHA1-202ENST00000394633 GATSQ8NAP1 163 aa16.66■□□□□ 0.26
PCDHA1-202ENST00000394633 OR10AC1Q8NH08 325 aa16.66■□□□□ 0.26
PCDHA1-202ENST00000394633 C15orf40Q8WUR7 153 aa16.66■□□□□ 0.26
PCDHA1-202ENST00000394633 RLN3Q8WXF3 142 aa16.66■□□□□ 0.26
PCDHA1-202ENST00000394633 TPSD1Q9BZJ3 242 aa16.66■□□□□ 0.26
PCDHA1-202ENST00000394633 SRA1Q9HD15 236 aaKnown RBP16.66■□□□□ 0.26
PCDHA1-202ENST00000394633 SDK1Q7Z5N4 2213 aa16.66■□□□□ 0.26
PCDHA1-202ENST00000394633 WDR87Q6ZQQ6 2873 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 TVP23AA6NH52 213 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 ELOA3DA6NLF2 546 aaPredicted RBP16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 PRAMEF2O60811 474 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 ST6GAL1P15907 406 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 UBE2IP63279 158 aaKnown RBP16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 TAGLNQ01995 201 aaKnown RBP16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 ERV3-1Q14264 604 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 C2orf68Q2NKX9 166 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 ELOA3BQ3SY89 546 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 LRRN1Q6UXK5 716 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 C10orf53Q8N6V4 93 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 ELOA3Q8NG57 546 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 C16orf52Q8NHV5 167 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 SDHAF2Q9NX18 166 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 MOKQ9UQ07 419 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 OR10H1Q9Y4A9 318 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 KCNMB2Q9Y691 235 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 TRBV5-7A0A0A0MS05 114 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 FAM221BA6H8Z2 402 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 ANXA2P2A6NMY6 339 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 OR4C45A6NMZ5 311 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 A8MUA0 341 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 H0YC42 278 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 H7C1C5 153 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 H7C417 338 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 OIP5O43482 229 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 XRCC3O43542 346 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 HIST1H2ABP04908 130 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 ANXA2P07355 339 aaKnown RBP16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 SDHAP31040 664 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 GPR3P46089 330 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 LCN6P62502 163 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 HLXQ14774 488 aaPredicted RBP16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 PCGF3Q3KNV8 242 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 MAMSTRQ6ZN01 415 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 HIST3H2AQ7L7L0 130 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 OR4C16Q8NGL9 310 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 HIST1H2ACQ93077 130 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 CXorf58Q96LI9 332 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 LMF1Q96S06 567 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 TCEAL2Q9H3H9 227 aaPredicted RBP16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 MTFP1Q9UDX5 166 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 ERVK-19Q9WJR5 959 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 CLDN16Q9Y5I7 305 aa16.65■□□□□ 0.26
PCDHA1-202ENST00000394633 MFSD2BA6NFX1 497 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 H3BSH0 61 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 PRKNO60260 465 aaPredicted RBP16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 RBBP9O75884 186 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 SIX6O95475 246 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 SEMA4FO95754 770 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 F13BP05160 661 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 STARD6P59095 220 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 BTG2P78543 158 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 ALG10Q5BKT4 473 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 ATG4DQ86TL0 474 aaPredicted RBP16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 SLC51BQ86UW2 128 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 OR5M1Q8NGP8 315 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 OR2G2Q8NGZ5 317 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 SLC37A2Q8TED4 501 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 ZDHHC1Q8WTX9 485 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 LINC00052Q96N35 136 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 WNT16Q9UBV4 365 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 IKZF2Q9UKS7 526 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 NCOR1O75376 2440 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 CHURC1-FNTBB4DL54 471 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 ZNF254O75437 659 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 CELA2BP08218 269 aaPredicted RBP16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 RNH1P13489 461 aaKnown RBP16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 APEHP13798 732 aaKnown RBP16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 ADH7P40394 386 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 RPS27P42677 84 aaKnown RBP16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 MAP2K6P52564 334 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 DLX5P56178 289 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 H2BFSP57053 126 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 SEC61A1P61619 476 aaKnown RBP16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 IGLV3-21P80748 117 aaPredicted RBP16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 MAT1AQ00266 395 aaKnown RBP16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 DMWDQ09019 674 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 BAMBIQ13145 260 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms