RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 ATP6V1E1P36543 226 aa12.12□□□□□ -0.47
PTN-202ENST00000393083 LGALS3BPQ08380 585 aa12.12□□□□□ -0.47
PTN-202ENST00000393083 ZP4Q12836 540 aa12.12□□□□□ -0.47
PTN-202ENST00000393083 ESPL1Q14674 2120 aa12.12□□□□□ -0.47
PTN-202ENST00000393083 LCN1P1Q5VSP4 162 aa12.12□□□□□ -0.47
PTN-202ENST00000393083 RNLSQ5VYX0 342 aa12.12□□□□□ -0.47
PTN-202ENST00000393083 B3GLCTQ6Y288 498 aa12.12□□□□□ -0.47
PTN-202ENST00000393083 B3GNT6Q6ZMB0 384 aa12.12□□□□□ -0.47
PTN-202ENST00000393083 FAM83FQ8NEG4 500 aaPredicted RBP12.12□□□□□ -0.47
PTN-202ENST00000393083 OR4F15Q8NGB8 312 aa12.12□□□□□ -0.47
PTN-202ENST00000393083 NEIL3Q8TAT5 605 aa12.12□□□□□ -0.47
PTN-202ENST00000393083 DGCR14Q96DF8 476 aaKnown RBP12.12□□□□□ -0.47
PTN-202ENST00000393083 MND1Q9BWT6 205 aa12.12□□□□□ -0.47
PTN-202ENST00000393083 TXNIPQ9H3M7 391 aa12.12□□□□□ -0.47
PTN-202ENST00000393083 SPRR3Q9UBC9 169 aa12.12□□□□□ -0.47
PTN-202ENST00000393083 TNFRSF10DQ9UBN6 386 aa12.12□□□□□ -0.47
PTN-202ENST00000393083 CLEC2DQ9UHP7 191 aa12.12□□□□□ -0.47
PTN-202ENST00000393083 OSGIN2Q9Y236 505 aa12.12□□□□□ -0.47
PTN-202ENST00000393083 ERGIC3Q9Y282 383 aa12.12□□□□□ -0.47
PTN-202ENST00000393083 UBR5O95071 2799 aaPredicted RBP12.12□□□□□ -0.47
PTN-202ENST00000393083 A0A1W2PRG6 482 aa12.11□□□□□ -0.47
PTN-202ENST00000393083 OR6C68A6NDL8 312 aa12.11□□□□□ -0.47
PTN-202ENST00000393083 H7C1C5 153 aa12.11□□□□□ -0.47
PTN-202ENST00000393083 AQP7O14520 342 aa12.11□□□□□ -0.47
PTN-202ENST00000393083 SLC19A2O60779 497 aa12.11□□□□□ -0.47
PTN-202ENST00000393083 RENP00797 406 aa12.11□□□□□ -0.47
PTN-202ENST00000393083 PTGS2P35354 604 aa12.11□□□□□ -0.47
PTN-202ENST00000393083 ACVR1BP36896 505 aa12.11□□□□□ -0.47
PTN-202ENST00000393083 CDKN2AP42771 156 aaKnown RBP12.11□□□□□ -0.47
PTN-202ENST00000393083 B3GALT5-AS1P59052 145 aa12.11□□□□□ -0.47
PTN-202ENST00000393083 RPL27P61353 136 aaKnown RBP12.11□□□□□ -0.47
PTN-202ENST00000393083 LCN6P62502 163 aa12.11□□□□□ -0.47
PTN-202ENST00000393083 MELKQ14680 651 aa12.11□□□□□ -0.47
PTN-202ENST00000393083 MED22Q15528 200 aa12.11□□□□□ -0.47
PTN-202ENST00000393083 ACKR1Q16570 336 aa12.11□□□□□ -0.47
PTN-202ENST00000393083 TIGD6Q17RP2 521 aa12.11□□□□□ -0.47
PTN-202ENST00000393083 CNPY1Q3B7I2 92 aa12.11□□□□□ -0.47
PTN-202ENST00000393083 WIPI1Q5MNZ9 446 aaPredicted RBP12.11□□□□□ -0.47
PTN-202ENST00000393083 PAQR6Q6TCH4 344 aa12.11□□□□□ -0.47
PTN-202ENST00000393083 ADPRHL1Q8NDY3 354 aa12.11□□□□□ -0.47
PTN-202ENST00000393083 PRR7Q8TB68 274 aa12.11□□□□□ -0.47
PTN-202ENST00000393083 ZNF519Q8TB69 540 aa12.11□□□□□ -0.47
PTN-202ENST00000393083 ISOC1Q96CN7 298 aa12.11□□□□□ -0.47
PTN-202ENST00000393083 SFXN2Q96NB2 322 aa12.11□□□□□ -0.47
PTN-202ENST00000393083 DDOQ99489 341 aa12.11□□□□□ -0.47
PTN-202ENST00000393083 TEAD3Q99594 435 aa12.11□□□□□ -0.47
PTN-202ENST00000393083 NMNAT2Q9BZQ4 307 aa12.11□□□□□ -0.47
PTN-202ENST00000393083 LDAHQ9H6V9 325 aa12.11□□□□□ -0.47
PTN-202ENST00000393083 RPRD1BQ9NQG5 326 aaKnown RBP12.11□□□□□ -0.47
PTN-202ENST00000393083 CHCHD3Q9NX63 227 aaKnown RBP12.11□□□□□ -0.47
PTN-202ENST00000393083 B3GALT5Q9Y2C3 310 aa12.11□□□□□ -0.47
PTN-202ENST00000393083 A0A1W2PNV4 684 aa12.1□□□□□ -0.47
PTN-202ENST00000393083 OR14I1A6ND48 311 aa12.1□□□□□ -0.47
PTN-202ENST00000393083 GJE1A6NN92 205 aa12.1□□□□□ -0.47
PTN-202ENST00000393083 MS4A18H0YCH9 400 aa12.1□□□□□ -0.47
PTN-202ENST00000393083 SULT2B1O00204 365 aa12.1□□□□□ -0.47
PTN-202ENST00000393083 XKRYO14609 159 aa12.1□□□□□ -0.47
PTN-202ENST00000393083 ARHGEF9O43307 516 aa12.1□□□□□ -0.47
PTN-202ENST00000393083 PMS2P2O95744 297 aa12.1□□□□□ -0.47
PTN-202ENST00000393083 IGHA1P01876 353 aa12.1□□□□□ -0.47
PTN-202ENST00000393083 MRPL3P09001 348 aaKnown RBP12.1□□□□□ -0.47
PTN-202ENST00000393083 SPI1P17947 270 aa12.1□□□□□ -0.47
PTN-202ENST00000393083 DIO1P49895 249 aa12.1□□□□□ -0.47
PTN-202ENST00000393083 ETV1P50549 477 aa12.1□□□□□ -0.47
PTN-202ENST00000393083 SLC25A1P53007 311 aa12.1□□□□□ -0.47
PTN-202ENST00000393083 RAC1P63000 192 aa12.1□□□□□ -0.47
PTN-202ENST00000393083 SLC35A1P78382 337 aa12.1□□□□□ -0.47
PTN-202ENST00000393083 RBPJQ06330 500 aa12.1□□□□□ -0.47
PTN-202ENST00000393083 SRSF1Q07955 248 aaKnown RBP eCLIP12.1□□□□□ -0.47
PTN-202ENST00000393083 MS4A18Q3C1V0 323 aa12.1□□□□□ -0.47
PTN-202ENST00000393083 SLC35D3Q5M8T2 416 aa12.1□□□□□ -0.47
PTN-202ENST00000393083 ADCK1Q86TW2 530 aa12.1□□□□□ -0.47
PTN-202ENST00000393083 KDM8Q8N371 416 aa12.1□□□□□ -0.47
PTN-202ENST00000393083 NANOGP1Q8N7R0 232 aa12.1□□□□□ -0.47
PTN-202ENST00000393083 ARIH2OSQ8N7S6 290 aa12.1□□□□□ -0.47
PTN-202ENST00000393083 TMEM99Q8N816 258 aa12.1□□□□□ -0.47
PTN-202ENST00000393083 FAM57AQ8TBR7 257 aa12.1□□□□□ -0.47
PTN-202ENST00000393083 OR5M11Q96RB7 305 aa12.1□□□□□ -0.47
PTN-202ENST00000393083 ASB6Q9NWX5 421 aa12.1□□□□□ -0.47
PTN-202ENST00000393083 LSM2Q9Y333 95 aaKnown RBP12.1□□□□□ -0.47
PTN-202ENST00000393083 DNAJC13O75165 2243 aa12.1□□□□□ -0.47
PTN-202ENST00000393083 CLEC18AA5D8T8 446 aa12.09□□□□□ -0.47
PTN-202ENST00000393083 NPIPA2E9PIF3 369 aa12.09□□□□□ -0.47
PTN-202ENST00000393083 NPIPA3F8WFD2 350 aa12.09□□□□□ -0.47
PTN-202ENST00000393083 TRMUO75648 421 aaKnown RBP12.09□□□□□ -0.47
PTN-202ENST00000393083 HSMCR30P0CW71 290 aa12.09□□□□□ -0.47
PTN-202ENST00000393083 HLA-DOBP13765 273 aa12.09□□□□□ -0.47
PTN-202ENST00000393083 CA7P43166 264 aa12.09□□□□□ -0.47
PTN-202ENST00000393083 DAP3P51398 398 aaKnown RBP12.09□□□□□ -0.47
PTN-202ENST00000393083 GFRA1P56159 465 aa12.09□□□□□ -0.47
PTN-202ENST00000393083 POU3F1Q03052 451 aaPredicted RBP12.09□□□□□ -0.47
PTN-202ENST00000393083 POU4F2Q12837 409 aa12.09□□□□□ -0.47
PTN-202ENST00000393083 C1DQ13901 141 aaKnown RBP12.09□□□□□ -0.47
PTN-202ENST00000393083 GGTLC2Q14390 218 aa12.09□□□□□ -0.47
PTN-202ENST00000393083 C3AR1Q16581 482 aa12.09□□□□□ -0.47
PTN-202ENST00000393083 CLEC18BQ6UXF7 455 aa12.09□□□□□ -0.47
PTN-202ENST00000393083 TMPPEQ6ZT21 453 aa12.09□□□□□ -0.47
PTN-202ENST00000393083 DOLPP1Q86YN1 238 aa12.09□□□□□ -0.47
PTN-202ENST00000393083 CLEC18CQ8NCF0 446 aa12.09□□□□□ -0.47
PTN-202ENST00000393083 PROKR2Q8NFJ6 384 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms