RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 MCRIP1C9JLW8 97 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 MPPED1O15442 326 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 SELENOFO60613 162 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 MRPL33O75394 65 aaKnown RBP12.09□□□□□ -0.47
LCA5-202ENST00000392959 NSA2O95478 260 aaKnown RBP12.09□□□□□ -0.47
LCA5-202ENST00000392959 HBE1P02100 147 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 SBK3P0C264 359 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 APEHP13798 732 aaKnown RBP12.09□□□□□ -0.47
LCA5-202ENST00000392959 SLC19A1P41440 591 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 SSX2Q16385 188 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 CDKN3Q16667 212 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 METRNLQ641Q3 311 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 NPSR1Q6W5P4 371 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 MRPL41Q8IXM3 137 aaKnown RBP12.09□□□□□ -0.47
LCA5-202ENST00000392959 RIMKLAQ8IXN7 391 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 SLC30A7Q8NEW0 376 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 BORCS7Q96B45 105 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 FGGYQ96C11 551 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 SDHAF2Q9NX18 166 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 HMGN4O00479 90 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 CBX7O95931 251 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 IGLV3-25P01717 112 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 DPP4P27487 766 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 MRPS34P82930 218 aaKnown RBP12.09□□□□□ -0.47
LCA5-202ENST00000392959 STK11Q15831 433 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 ZNF684Q5T5D7 378 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 SYT9Q86SS6 491 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 OR51S1Q8NGJ8 323 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 ZNF845Q96IR2 970 aaPredicted RBP12.09□□□□□ -0.47
LCA5-202ENST00000392959 SAMD10Q9BYL1 202 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 OR52A5Q9H2C5 316 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 WIF1Q9Y5W5 379 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 HSBP1L1C9JCN9 74 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 EPHA4P54764 986 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 EEF1A2Q05639 463 aaKnown RBP12.09□□□□□ -0.47
LCA5-202ENST00000392959 TANGO2Q6ICL3 276 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 OVCH1Q7RTY7 1134 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 PHOSPHO2Q8TCD6 241 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 SECTM1Q8WVN6 248 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 UPRTQ96BW1 309 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 LYSMD1Q96S90 227 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 OCSTAMPQ9BR26 566 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 ULBP3Q9BZM4 244 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 TMEM30AQ9NV96 361 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.09□□□□□ -0.47
LCA5-202ENST00000392959 A8MVM7 634 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 TARM1B6A8C7 271 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 B4GALT3O60512 393 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 TCTN3Q6NUS6 607 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 ZNF620Q6ZNG0 422 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 AAED1Q7RTV5 226 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 TMEM200AQ86VY9 491 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 WDR5BQ86VZ2 330 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 PFN4Q8NHR9 129 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 CPNE4Q96A23 557 aaPredicted RBP12.09□□□□□ -0.47
LCA5-202ENST00000392959 STACQ99469 402 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 TMEM43Q9BTV4 400 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 DUSP23Q9BVJ7 150 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 CD207Q9UJ71 328 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 OR52A1Q9UKL2 312 aa12.09□□□□□ -0.47
LCA5-202ENST00000392959 E9PI62 339 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 CPEP16870 476 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 TGFBR1P36897 503 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 CASP6P55212 293 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 SRPXP78539 464 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 AADACL3Q5VUY0 350 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 ADIPOR2Q86V24 386 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 HSD17B11Q8NBQ5 300 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 MS4A6EQ96DS6 147 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 SLC6A18Q96N87 628 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 DCLRE1CQ96SD1 692 aaKnown RBP12.08□□□□□ -0.48
LCA5-202ENST00000392959 ZDHHC5Q9C0B5 715 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 DHCR7Q9UBM7 475 aaKnown RBP12.08□□□□□ -0.48
LCA5-202ENST00000392959 CHRM2P08172 466 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 ZNF728P0DKX0 622 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 PGFP49763 221 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 TRMT12Q53H54 448 aaKnown RBP12.08□□□□□ -0.48
LCA5-202ENST00000392959 ZNF385BQ569K4 471 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 SFRP5Q5T4F7 317 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 PRAMEF20Q5VT98 475 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 C9orf135Q5VTT2 229 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 LPCAT3Q6P1A2 487 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 BPHLQ86WA6 291 aaPredicted RBP12.08□□□□□ -0.48
LCA5-202ENST00000392959 SPNS2Q8IVW8 549 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 PLPP6Q8IY26 295 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 TMEM99Q8N816 258 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 TERB2Q8NHR7 220 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 MARC2Q969Z3 335 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 SDF2Q99470 211 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 CD63P08962 238 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 ANXA7P20073 488 aaKnown RBP12.08□□□□□ -0.48
LCA5-202ENST00000392959 RACK1P63244 317 aaKnown RBP12.08□□□□□ -0.48
LCA5-202ENST00000392959 SLC35A1P78382 337 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 CATR1Q13166 79 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 TMEM31Q5JXX7 168 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 AVPI1Q5T686 147 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 AFMIDQ63HM1 303 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 DHRS4L2Q6PKH6 230 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 CD300LGQ6UXG3 332 aa12.08□□□□□ -0.48
LCA5-202ENST00000392959 OR52I2Q8NH67 350 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms