RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 TMEM127O75204 238 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 GLCEO94923 617 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 CD14P08571 375 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 IL12BP29460 328 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 CTXN1P60606 82 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 IL10RAQ13651 578 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 C14orf28Q4W4Y0 310 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 KLHL26Q53HC5 615 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 NR2C2APQ86WQ0 139 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 NPEPL1Q8NDH3 523 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 OIT3Q8WWZ8 545 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 PHYHIPQ92561 330 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 RXFP3Q9NSD7 469 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 MIOXQ9UGB7 285 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 CBY1Q9Y3M2 126 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 TEX13CA0A0J9YWL9 993 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 SELENOFO60613 162 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 ATG12O94817 140 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 UTS2O95399 124 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 ZNF806P0C7X5 589 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 BCKDHBP21953 392 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 ITPKBP27987 946 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 PSMB10P40306 273 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 AQP2P41181 271 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 SLC25A35Q3KQZ1 300 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 ALG10Q5BKT4 473 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 BAIAP2L2Q6UXY1 529 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 CREB3L1Q96BA8 519 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 RNF31Q96EP0 1072 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 ZFP3Q96NJ6 502 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 KCNJ15Q99712 375 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 ALG12Q9BV10 488 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 SLITRK2Q9H156 845 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 PCED1AQ9H1Q7 454 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 CHMP1AQ9HD42 196 aaPredicted RBP8.78□□□□□ -1
COL6A3-204ENST00000392003 CPED1A4D0V7 1026 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 LINC00862A6NCI5 91 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 TEX46H3BTG2 121 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 GPR171O14626 319 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 EIF3GO75821 320 aaKnown RBP eCLIP8.78□□□□□ -1
COL6A3-204ENST00000392003 SLC22A5O76082 557 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 NUDT14O95848 222 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 VAMP1P23763 118 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 OR1D4P47884 311 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 OR1D5P58170 312 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 FHL1Q13642 323 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 GPR176Q14439 515 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 KCNAB1Q14722 419 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 GLCCI1Q86VQ1 547 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 TOMM5Q8N4H5 51 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 MOSPD2Q8NHP6 518 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 LCORQ96JN0 433 aaPredicted RBP8.78□□□□□ -1
COL6A3-204ENST00000392003 Q96M85 177 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 ADAD1Q96M93 576 aaKnown RBP8.78□□□□□ -1
COL6A3-204ENST00000392003 MARVELD1Q9BSK0 173 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 DPAGT1Q9H3H5 408 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 GRHPRQ9UBQ7 328 aa8.78□□□□□ -1
COL6A3-204ENST00000392003 UNC13CQ8NB66 2214 aa8.77□□□□□ -1
COL6A3-204ENST00000392003 A0A1W2PR77 199 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 OR6C68A6NDL8 312 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 ARGFXA6NJG6 315 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 SOX1O00570 391 aaPredicted RBP8.77□□□□□ -1.01
COL6A3-204ENST00000392003 DUX1O43812 170 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 HYAL3O43820 417 aaPredicted RBP8.77□□□□□ -1.01
COL6A3-204ENST00000392003 PRKNO60260 465 aaPredicted RBP8.77□□□□□ -1.01
COL6A3-204ENST00000392003 ITGA10O75578 1167 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 RENP00797 406 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 SNRPBP14678 240 aaKnown RBP8.77□□□□□ -1.01
COL6A3-204ENST00000392003 ERP29P30040 261 aaKnown RBP8.77□□□□□ -1.01
COL6A3-204ENST00000392003 ADH7P40394 386 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 SLC6A8P48029 635 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 NXPH1P58417 271 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 STARD6P59095 220 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 FLI1Q01543 452 aaPredicted RBP8.77□□□□□ -1.01
COL6A3-204ENST00000392003 NTRK2Q16620 822 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 OVCH1Q7RTY7 1134 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 RFLNBQ8N5W9 214 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 DPYSL5Q9BPU6 564 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 NXF5Q9H1B4 397 aaKnown RBP8.77□□□□□ -1.01
COL6A3-204ENST00000392003 CHRDQ9H2X0 955 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 MOKQ9UQ07 419 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 AK6Q9Y3D8 172 aaKnown RBP8.77□□□□□ -1.01
COL6A3-204ENST00000392003 ZDBF2Q9HCK1 2354 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 FAM171A2A8MVW0 826 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 SC5DO75845 299 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 RBBP9O75884 186 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 UBL3O95164 117 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 CD1AP06126 327 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 ARSBP15848 533 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 AHCYP23526 432 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 CXCR1P25024 350 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 THBS2P35442 1172 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 BTG1P62324 171 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 MAB21L1Q13394 359 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 COTL1Q14019 142 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 RNASE12Q5GAN4 147 aaKnown RBP8.77□□□□□ -1.01
COL6A3-204ENST00000392003 TSSK4Q6SA08 328 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 ZNF767PQ75MW2 155 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 TRILQ7L0X0 811 aa8.77□□□□□ -1.01
COL6A3-204ENST00000392003 PLXDC1Q8IUK5 500 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms