RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 P2RY2P41231 377 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 GLP1RP43220 463 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 IDH2P48735 452 aaKnown RBP-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 EFNA4P52798 201 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 AP1B1Q10567 949 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 EPS8Q12929 822 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 BIRC2Q13490 618 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 GPR50Q13585 617 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 STARD3Q14849 445 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 PPA1Q15181 289 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 ANKRD1Q15327 319 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 PFKFB4Q16877 469 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 PYDC2Q56P42 97 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 C9orf152Q5JTZ5 239 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 KIAA0930Q6ICG6 404 aaPredicted RBP-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 FIGLAQ6QHK4 219 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 MACC1Q6ZN28 852 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 FAM231DQ6ZW35 169 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 COX15Q7KZN9 410 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 SPATA12Q7Z6I5 190 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 MOB3BQ86TA1 216 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 CACNA2D3Q8IZS8 1091 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 FAM177A1Q8N128 213 aaPredicted RBP-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 TCAIMQ8N3R3 496 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 SNX31Q8N9S9 440 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 LRRC75AQ8NAA5 344 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 SPATA5Q8NB90 893 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 Q8NFD4 153 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 ACTL9Q8TC94 416 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 DYNC2LI1Q8TCX1 351 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 TCP10LQ8TDR4 215 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 SGCDQ92629 289 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 ULK4Q96C45 1275 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 RAB3CQ96E17 227 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 CCDC34Q96HJ3 373 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 OLFM3Q96PB7 478 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 SIGMAR1Q99720 223 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 THUMPD3Q9BV44 507 aaKnown RBP-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 FRMD8P1Q9BZ68 369 aaPredicted RBP-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 UBA5Q9GZZ9 404 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 CYP4F30PQ9H0H9 118 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 DCSTAMPQ9H295 470 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 CHMP1AQ9HD42 196 aaPredicted RBP-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 UBE2TQ9NPD8 197 aaPredicted RBP-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 ZNF302Q9NR11 478 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 UQCC1Q9NVA1 299 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 MED9Q9NWA0 146 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 TAS2R14Q9NYV8 317 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 STK26Q9P289 416 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 TXNDC16Q9P2K2 825 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 ERVK-18Q9QC07 812 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 PRO0255Q9UI72 69 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 CORO1CQ9ULV4 474 aaPredicted RBP-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 EXOC6BQ9Y2D4 811 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 IFT52Q9Y366 437 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 HYOU1Q9Y4L1 999 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 LINC00588Q9Y4M8 146 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 NME7Q9Y5B8 376 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 PCYT1BQ9Y5K3 369 aaPredicted RBP-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 VWA8A3KMH1 1905 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 FRMPD1Q5SYB0 1578 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 ANAPC1Q9H1A4 1944 aa-1.6□□□□□ -2.67
RNU6-540P-201ENST00000384622 MAP3K1Q13233 1512 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 ELP1O95163 1332 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 ZMYM6O95789 1325 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 DOCK11Q5JSL3 2073 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 IGLV10-54A0A075B6I4 117 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 NPIPA5A0A0B4J1W7 369 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 ARHGEF35A5YM69 484 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 NUPR2A6NF83 97 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 OR2T8A6NH00 312 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 OR7C2O60412 319 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 OR7C1O76099 320 aaPredicted RBP-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 KIAA0754O94854 1291 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 EPPINO95925 133 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 GOT2P00505 430 aaKnown RBP-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 IGLV1-51P01701 117 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 TK1P04183 234 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 CRYGBP07316 175 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 CD7P09564 240 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 OR2T7P0C7T2 308 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 CCDC130P13994 396 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 SLC25A16P16260 332 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 GZMHP20718 246 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 UCP1P25874 307 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 CTNNA2P26232 953 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 GABRA5P31644 462 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 GARSP41250 739 aaKnown RBP-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 CA7P43166 264 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 MATR3P43243 847 aaKnown RBP eCLIP-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 QARSP47897 775 aaKnown RBP-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 NPBWR2P48146 333 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 RAB27AP51159 221 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 DUSP3P51452 185 aaPredicted RBP-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 AK2P54819 239 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 RPS15AP62244 130 aaKnown RBP-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 RBX1P62877 108 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 TSPY1Q01534 308 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 TGFBR3Q03167 851 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 RPL18Q07020 188 aaKnown RBP-1.61□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms