RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 CD276Q5ZPR3 534 aa17.29■□□□□ 0.36
CSPG5-202ENST00000383738 ZNF322Q6U7Q0 402 aaPredicted RBP17.29■□□□□ 0.36
CSPG5-202ENST00000383738 OR8D4Q8NGM9 314 aa17.29■□□□□ 0.36
CSPG5-202ENST00000383738 FAM174AQ8TBP5 190 aa17.29■□□□□ 0.36
CSPG5-202ENST00000383738 BRIX1Q8TDN6 353 aaKnown RBP17.29■□□□□ 0.36
CSPG5-202ENST00000383738 HS6ST2Q96MM7 605 aa17.29■□□□□ 0.36
CSPG5-202ENST00000383738 DERL3Q96Q80 235 aa17.29■□□□□ 0.36
CSPG5-202ENST00000383738 ABHD1Q96SE0 405 aa17.29■□□□□ 0.36
CSPG5-202ENST00000383738 PARP12Q9H0J9 701 aaKnown RBP17.29■□□□□ 0.36
CSPG5-202ENST00000383738 CHST8Q9H2A9 424 aa17.29■□□□□ 0.36
CSPG5-202ENST00000383738 MN1Q10571 1320 aaPredicted RBP17.29■□□□□ 0.36
CSPG5-202ENST00000383738 MUC6Q6W4X9 2439 aa17.29■□□□□ 0.36
CSPG5-202ENST00000383738 CHRM4P08173 479 aa17.29■□□□□ 0.36
CSPG5-202ENST00000383738 CLUP10909 449 aa17.29■□□□□ 0.36
CSPG5-202ENST00000383738 OR3A2P47893 321 aa17.29■□□□□ 0.36
CSPG5-202ENST00000383738 CTSFQ9UBX1 484 aa17.29■□□□□ 0.36
CSPG5-202ENST00000383738 CBX7O95931 251 aa17.29■□□□□ 0.36
CSPG5-202ENST00000383738 TACSTD2P09758 323 aa17.29■□□□□ 0.36
CSPG5-202ENST00000383738 RBM39Q14498 530 aaKnown RBP17.29■□□□□ 0.36
CSPG5-202ENST00000383738 ST3GAL2Q16842 350 aa17.29■□□□□ 0.36
CSPG5-202ENST00000383738 OR10R2Q8NGX6 335 aa17.29■□□□□ 0.36
CSPG5-202ENST00000383738 NIT2Q9NQR4 276 aa17.29■□□□□ 0.36
CSPG5-202ENST00000383738 ZNF254O75437 659 aa17.28■□□□□ 0.36
CSPG5-202ENST00000383738 TEAD1P28347 426 aa17.28■□□□□ 0.36
CSPG5-202ENST00000383738 RAB5BP61020 215 aa17.28■□□□□ 0.36
CSPG5-202ENST00000383738 CCL7P80098 99 aa17.28■□□□□ 0.36
CSPG5-202ENST00000383738 ALG10Q5BKT4 473 aa17.28■□□□□ 0.36
CSPG5-202ENST00000383738 TMEM81Q6P7N7 255 aa17.28■□□□□ 0.36
CSPG5-202ENST00000383738 QSOX2Q6ZRP7 698 aa17.28■□□□□ 0.36
CSPG5-202ENST00000383738 RPS10P5Q9NQ39 176 aa17.28■□□□□ 0.36
CSPG5-202ENST00000383738 PRDM7Q9NQW5 492 aa17.28■□□□□ 0.36
CSPG5-202ENST00000383738 PADI1Q9ULC6 663 aa17.28■□□□□ 0.36
CSPG5-202ENST00000383738 NPIPA2E9PIF3 369 aa17.28■□□□□ 0.36
CSPG5-202ENST00000383738 NPIPA3F8WFD2 350 aa17.28■□□□□ 0.36
CSPG5-202ENST00000383738 GLAP06280 429 aa17.28■□□□□ 0.36
CSPG5-202ENST00000383738 SLC35E2P0CK97 266 aa17.28■□□□□ 0.36
CSPG5-202ENST00000383738 RPS27P42677 84 aaKnown RBP17.28■□□□□ 0.36
CSPG5-202ENST00000383738 RAP2BP61225 183 aa17.28■□□□□ 0.36
CSPG5-202ENST00000383738 LCN10Q6JVE6 187 aa17.28■□□□□ 0.36
CSPG5-202ENST00000383738 UBALD2Q8IYN6 164 aa17.28■□□□□ 0.36
CSPG5-202ENST00000383738 CXorf58Q96LI9 332 aa17.28■□□□□ 0.36
CSPG5-202ENST00000383738 NOX4Q9NPH5 578 aa17.28■□□□□ 0.36
CSPG5-202ENST00000383738 A0A1B0GWA3 101 aa17.28■□□□□ 0.36
CSPG5-202ENST00000383738 FBXO24O75426 580 aa17.28■□□□□ 0.36
CSPG5-202ENST00000383738 NAT2P11245 290 aa17.28■□□□□ 0.36
CSPG5-202ENST00000383738 ACHEP22303 614 aa17.28■□□□□ 0.36
CSPG5-202ENST00000383738 CD34P28906 385 aa17.28■□□□□ 0.36
CSPG5-202ENST00000383738 RFC3P40938 356 aa17.28■□□□□ 0.36
CSPG5-202ENST00000383738 CLRN1P58418 232 aa17.28■□□□□ 0.36
CSPG5-202ENST00000383738 TSPAN31Q12999 210 aa17.28■□□□□ 0.36
CSPG5-202ENST00000383738 EIF2B1Q14232 305 aaKnown RBP17.28■□□□□ 0.36
CSPG5-202ENST00000383738 RNASE11Q8TAA1 199 aaKnown RBP17.28■□□□□ 0.36
CSPG5-202ENST00000383738 SDF2Q99470 211 aa17.28■□□□□ 0.36
CSPG5-202ENST00000383738 RBM24Q9BX46 236 aaKnown RBP17.28■□□□□ 0.36
CSPG5-202ENST00000383738 HCRTR1O43613 425 aa17.27■□□□□ 0.36
CSPG5-202ENST00000383738 OR8G3PP0DMU2 310 aa17.27■□□□□ 0.36
CSPG5-202ENST00000383738 IGSF11Q5DX21 431 aa17.27■□□□□ 0.36
CSPG5-202ENST00000383738 SLC6A19Q695T7 634 aa17.27■□□□□ 0.36
CSPG5-202ENST00000383738 TIGD3Q6B0B8 471 aa17.27■□□□□ 0.36
CSPG5-202ENST00000383738 MEPCEQ7L2J0 689 aaKnown RBP17.27■□□□□ 0.36
CSPG5-202ENST00000383738 FAM26EQ8N5C1 309 aa17.27■□□□□ 0.36
CSPG5-202ENST00000383738 EIF5A2Q9GZV4 153 aaKnown RBP17.27■□□□□ 0.36
CSPG5-202ENST00000383738 ZNF700Q9H0M5 742 aa17.27■□□□□ 0.36
CSPG5-202ENST00000383738 SCGNO76038 276 aa17.27■□□□□ 0.36
CSPG5-202ENST00000383738 UBL3O95164 117 aa17.27■□□□□ 0.36
CSPG5-202ENST00000383738 NME1P15531 152 aaKnown RBP17.27■□□□□ 0.36
CSPG5-202ENST00000383738 TACR3P29371 465 aa17.27■□□□□ 0.36
CSPG5-202ENST00000383738 ULK3Q6PHR2 472 aa17.27■□□□□ 0.36
CSPG5-202ENST00000383738 DHRS13Q6UX07 377 aa17.27■□□□□ 0.36
CSPG5-202ENST00000383738 VN1R4Q7Z5H5 301 aa17.27■□□□□ 0.36
CSPG5-202ENST00000383738 SDHCQ99643 169 aaPredicted RBP17.27■□□□□ 0.36
CSPG5-202ENST00000383738 CST11Q9H112 138 aa17.27■□□□□ 0.36
CSPG5-202ENST00000383738 UBQLN3Q9H347 655 aa17.27■□□□□ 0.36
CSPG5-202ENST00000383738 SEMA4GQ9NTN9 838 aa17.27■□□□□ 0.36
CSPG5-202ENST00000383738 RAB3DO95716 219 aa17.27■□□□□ 0.35
CSPG5-202ENST00000383738 TPOP07202 933 aa17.27■□□□□ 0.35
CSPG5-202ENST00000383738 FOLR1P15328 257 aa17.27■□□□□ 0.35
CSPG5-202ENST00000383738 GLB1P16278 677 aa17.27■□□□□ 0.35
CSPG5-202ENST00000383738 TUSC1Q2TAM9 212 aa17.27■□□□□ 0.35
CSPG5-202ENST00000383738 SLC51BQ86UW2 128 aa17.27■□□□□ 0.35
CSPG5-202ENST00000383738 C16orf52Q8NHV5 167 aa17.27■□□□□ 0.35
CSPG5-202ENST00000383738 CNN2Q99439 309 aaKnown RBP17.27■□□□□ 0.35
CSPG5-202ENST00000383738 ARHGAP9Q9BRR9 750 aa17.27■□□□□ 0.35
CSPG5-202ENST00000383738 UQCC2Q9BRT2 126 aa17.27■□□□□ 0.35
CSPG5-202ENST00000383738 RBM7Q9Y580 266 aaKnown RBP17.27■□□□□ 0.35
CSPG5-202ENST00000383738 A0A1B0GX78 115 aa17.26■□□□□ 0.35
CSPG5-202ENST00000383738 SHISA7A6NL88 538 aa17.26■□□□□ 0.35
CSPG5-202ENST00000383738 TTLL8A6PVC2 850 aa17.26■□□□□ 0.35
CSPG5-202ENST00000383738 ZFAND5O76080 213 aa17.26■□□□□ 0.35
CSPG5-202ENST00000383738 NDUFB2O95178 105 aa17.26■□□□□ 0.35
CSPG5-202ENST00000383738 MAKP20794 623 aa17.26■□□□□ 0.35
CSPG5-202ENST00000383738 DCTDP32321 178 aa17.26■□□□□ 0.35
CSPG5-202ENST00000383738 AKR1C3P42330 323 aa17.26■□□□□ 0.35
CSPG5-202ENST00000383738 DYRK1AQ13627 763 aa17.26■□□□□ 0.35
CSPG5-202ENST00000383738 C9orf62Q8N4C0 152 aa17.26■□□□□ 0.35
CSPG5-202ENST00000383738 C12orf45Q8N5I9 185 aaPredicted RBP17.26■□□□□ 0.35
CSPG5-202ENST00000383738 TMEM41AQ96HV5 264 aa17.26■□□□□ 0.35
CSPG5-202ENST00000383738 DCBLD2Q96PD2 775 aa17.26■□□□□ 0.35
CSPG5-202ENST00000383738 SMIM3Q9BZL3 60 aa17.26■□□□□ 0.35
CSPG5-202ENST00000383738 BIN3Q9NQY0 253 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms