RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 NXPE1Q8N323 547 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 LMNTD1Q8N9Z9 388 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 MYADMQ96S97 322 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 TIMP4Q99727 224 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 TMEM208Q9BTX3 173 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 FBXO44Q9H4M3 255 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 TIMM10BQ9Y5J6 103 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 UMAD1C9J7I0 102 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 CSF1P09603 554 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 SLC25A4P12235 298 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 NDUFV2P19404 249 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 TLX1P31314 330 aaPredicted RBP13.75□□□□□ -0.21
VLDLR-202ENST00000382099 APLNRP35414 380 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 YBEYP58557 167 aaPredicted RBP13.75□□□□□ -0.21
VLDLR-202ENST00000382099 PFN3P60673 137 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 AARDQ4LEZ3 155 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 VWA2Q5GFL6 755 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 OR2T2Q6IF00 324 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 PWWP2BQ6NUJ5 590 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 STEAP1BQ6NZ63 245 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 NIPAL3Q6P499 406 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 RAB24Q969Q5 203 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 SH2B3Q9UQQ2 575 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 A8MWP6 167 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 BLOC1S5-TXNDC5H3BN57 136 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 PCCBP05166 539 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 OR8G3PP0DMU2 310 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 NAA10P41227 235 aaPredicted RBP13.75□□□□□ -0.21
VLDLR-202ENST00000382099 SNRPNP63162 240 aaKnown RBP13.75□□□□□ -0.21
VLDLR-202ENST00000382099 GLO1Q04760 184 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 NKPD1Q17RQ9 610 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 FBXO46Q6PJ61 603 aaPredicted RBP13.75□□□□□ -0.21
VLDLR-202ENST00000382099 CAMKMTQ7Z624 323 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 GPR137CQ8N3F9 429 aa13.75□□□□□ -0.21
VLDLR-202ENST00000382099 CLP1Q92989 425 aaKnown RBP13.75□□□□□ -0.21
VLDLR-202ENST00000382099 SPEGQ15772 3267 aa13.74□□□□□ -0.21
VLDLR-202ENST00000382099 DLEU1O43261 78 aa13.74□□□□□ -0.21
VLDLR-202ENST00000382099 ZNF821O75541 412 aaPredicted RBP13.74□□□□□ -0.21
VLDLR-202ENST00000382099 CLDN7O95471 211 aa13.74□□□□□ -0.21
VLDLR-202ENST00000382099 AK1P00568 194 aa13.74□□□□□ -0.21
VLDLR-202ENST00000382099 CD8AP01732 235 aa13.74□□□□□ -0.21
VLDLR-202ENST00000382099 OR8U9P0C7N5 309 aa13.74□□□□□ -0.21
VLDLR-202ENST00000382099 OR13C7P0DN81 318 aa13.74□□□□□ -0.21
VLDLR-202ENST00000382099 DPP4P27487 766 aa13.74□□□□□ -0.21
VLDLR-202ENST00000382099 IL2RGP31785 369 aa13.74□□□□□ -0.21
VLDLR-202ENST00000382099 SLC6A12P48065 614 aa13.74□□□□□ -0.21
VLDLR-202ENST00000382099 DVL1P1P54792 670 aaPredicted RBP13.74□□□□□ -0.21
VLDLR-202ENST00000382099 HIST2H3PS2Q5TEC6 136 aa13.74□□□□□ -0.21
VLDLR-202ENST00000382099 MRM1Q6IN84 353 aaKnown RBP13.74□□□□□ -0.21
VLDLR-202ENST00000382099 ARL14Q8N4G2 192 aa13.74□□□□□ -0.21
VLDLR-202ENST00000382099 OR4K14Q8NGD5 310 aa13.74□□□□□ -0.21
VLDLR-202ENST00000382099 OR8U1Q8NH10 309 aa13.74□□□□□ -0.21
VLDLR-202ENST00000382099 MR1Q95460 341 aa13.74□□□□□ -0.21
VLDLR-202ENST00000382099 DNAJA3Q96EY1 480 aa13.74□□□□□ -0.21
VLDLR-202ENST00000382099 CDCA3Q99618 268 aaPredicted RBP13.74□□□□□ -0.21
VLDLR-202ENST00000382099 RIOK2Q9BVS4 552 aaKnown RBP13.74□□□□□ -0.21
VLDLR-202ENST00000382099 SLC2A1P11166 492 aa13.74□□□□□ -0.21
VLDLR-202ENST00000382099 RNH1P13489 461 aaKnown RBP13.74□□□□□ -0.21
VLDLR-202ENST00000382099 SERPINF1P36955 418 aa13.74□□□□□ -0.21
VLDLR-202ENST00000382099 GGNBP1Q5YKI7 109 aa13.74□□□□□ -0.21
VLDLR-202ENST00000382099 DMKNQ6E0U4 476 aaPredicted RBP13.74□□□□□ -0.21
VLDLR-202ENST00000382099 LPCAT3Q6P1A2 487 aa13.74□□□□□ -0.21
VLDLR-202ENST00000382099 Q6ZRG5 221 aa13.74□□□□□ -0.21
VLDLR-202ENST00000382099 OVCH1Q7RTY7 1134 aa13.74□□□□□ -0.21
VLDLR-202ENST00000382099 RFLNBQ8N5W9 214 aa13.74□□□□□ -0.21
VLDLR-202ENST00000382099 HAVCR1Q96D42 359 aa13.74□□□□□ -0.21
VLDLR-202ENST00000382099 IL26Q9NPH9 171 aa13.74□□□□□ -0.21
VLDLR-202ENST00000382099 TMEM100Q9NV29 134 aa13.74□□□□□ -0.21
VLDLR-202ENST00000382099 WIF1Q9Y5W5 379 aa13.74□□□□□ -0.21
VLDLR-202ENST00000382099 CACNA1CQ13936 2221 aa13.74□□□□□ -0.21
VLDLR-202ENST00000382099 PLXNB2O15031 1838 aa13.74□□□□□ -0.21
VLDLR-202ENST00000382099 COL4A4P53420 1690 aaPredicted RBP13.73□□□□□ -0.21
VLDLR-202ENST00000382099 H7C417 338 aa13.73□□□□□ -0.21
VLDLR-202ENST00000382099 MTX2O75431 263 aa13.73□□□□□ -0.21
VLDLR-202ENST00000382099 CD14P08571 375 aa13.73□□□□□ -0.21
VLDLR-202ENST00000382099 RAB40ALP0C0E4 278 aa13.73□□□□□ -0.21
VLDLR-202ENST00000382099 FAM157CP0CG43 387 aa13.73□□□□□ -0.21
VLDLR-202ENST00000382099 MYOGP15173 224 aa13.73□□□□□ -0.21
VLDLR-202ENST00000382099 FGF7P21781 194 aa13.73□□□□□ -0.21
VLDLR-202ENST00000382099 ACRV1P26436 265 aa13.73□□□□□ -0.21
VLDLR-202ENST00000382099 HSD3B2P26439 372 aa13.73□□□□□ -0.21
VLDLR-202ENST00000382099 PMELP40967 661 aa13.73□□□□□ -0.21
VLDLR-202ENST00000382099 PPP2CBP62714 309 aa13.73□□□□□ -0.21
VLDLR-202ENST00000382099 PPP2CAP67775 309 aa13.73□□□□□ -0.21
VLDLR-202ENST00000382099 ZNF616Q08AN1 781 aa13.73□□□□□ -0.21
VLDLR-202ENST00000382099 EIF4EBP2Q13542 120 aaPredicted RBP13.73□□□□□ -0.21
VLDLR-202ENST00000382099 TRA2AQ13595 282 aaKnown RBP eCLIP13.73□□□□□ -0.21
VLDLR-202ENST00000382099 EBPQ15125 230 aaKnown RBP13.73□□□□□ -0.21
VLDLR-202ENST00000382099 OR52L1Q8NGH7 329 aa13.73□□□□□ -0.21
VLDLR-202ENST00000382099 OR1J1Q8NGS3 322 aa13.73□□□□□ -0.21
VLDLR-202ENST00000382099 RAB40AQ8WXH6 277 aa13.73□□□□□ -0.21
VLDLR-202ENST00000382099 PTPN18Q99952 460 aa13.73□□□□□ -0.21
VLDLR-202ENST00000382099 SLC12A9Q9BXP2 914 aa13.73□□□□□ -0.21
VLDLR-202ENST00000382099 ACTRT3Q9BYD9 372 aa13.73□□□□□ -0.21
VLDLR-202ENST00000382099 MTFP1Q9UDX5 166 aa13.73□□□□□ -0.21
VLDLR-202ENST00000382099 TOX3O15405 576 aaPredicted RBP13.73□□□□□ -0.21
VLDLR-202ENST00000382099 TSPAN15O95858 294 aa13.73□□□□□ -0.21
VLDLR-202ENST00000382099 NDUFS1P28331 727 aa13.73□□□□□ -0.21
VLDLR-202ENST00000382099 RASGEF1BQ0VAM2 473 aa13.73□□□□□ -0.21
VLDLR-202ENST00000382099 TMEM115Q12893 351 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms