RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 ABCA3Q99758 1704 aa7.8□□□□□ -1.16
NHLRC3-201ENST00000379599 GXYLT2A0PJZ3 443 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 ZC3H12DA2A288 527 aaKnown RBP7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 C5orf51A6NDU8 294 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 NPIPA7E9PJI5 369 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 MAN2B1O00754 1011 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 DVL1O14640 695 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 OGG1O15527 345 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 STK16O75716 305 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 ABLIM3O94929 683 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 TSPAN15O95858 294 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 CD8AP01732 235 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 FCGR3AP08637 254 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 CST2P09228 141 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 NPIPA8P0DM63 369 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 CDC34P49427 236 aaPredicted RBP7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 CDK5Q00535 292 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 IHHQ14623 411 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 DUSP5Q16690 384 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 UBE2R2Q712K3 238 aaPredicted RBP7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 CACUL1Q86Y37 369 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 ZNF573Q86YE8 665 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 SIRT6Q8N6T7 355 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 GHSRQ92847 366 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 FAM46AQ96IP4 442 aaKnown RBP7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 ADGRG7Q96K78 797 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 GPA33Q99795 319 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 SMOQ99835 787 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 ZNF649Q9BS31 505 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 BPIFA1Q9NP55 256 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 FBXO7Q9Y3I1 522 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 A0A087WUJ7 227 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 C1orf226A1L170 272 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 DRGXA6NNA5 263 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 GEMIN2O14893 280 aaKnown RBP7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 NPC1O15118 1278 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 PLRG1O43660 514 aaKnown RBP7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 CDC14BO60729 498 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 OR4A8P0C604 315 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 CDK2P24941 298 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 PYCR1P32322 319 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 BMI1P35226 326 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 IGFALSP35858 605 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 RAB1AP62820 205 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 ACSM2AQ08AH3 577 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 NFATC4Q14934 902 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 NKPD1Q17RQ9 610 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 ZNF311Q5JNZ3 666 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 HENMT1Q5T8I9 393 aaKnown RBP7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 YOD1Q5VVQ6 348 aaPredicted RBP7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 ACSM2BQ68CK6 577 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 RTL6Q6ICC9 239 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 Q6ZRG5 221 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 TMPPEQ6ZT21 453 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 SLC16A14Q7RTX9 510 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 SZRD1Q7Z422 152 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 CPOQ8IVL8 374 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 EID2Q8N6I1 236 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 TMEM99Q8N816 258 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 OR13C8Q8NGS7 320 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 SLC25A43Q8WUT9 341 aaPredicted RBP7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 SMARCD2Q92925 531 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 TM4SF18Q96CE8 201 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 SAT2Q96F10 170 aaPredicted RBP7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 ZNF845Q96IR2 970 aaPredicted RBP7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 SEMA3CQ99985 751 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 SLC25A18Q9H1K4 315 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 CXCL16Q9H2A7 254 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 CWH43Q9H720 699 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 GPATCH2Q9NW75 528 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 GSKIPQ9P0R6 139 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 GULP1Q9UBP9 304 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 ZNF282Q9UDV7 671 aaPredicted RBP7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 FARSAQ9Y285 508 aaKnown RBP7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 HDGFL3Q9Y3E1 203 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 CSAG2Q9Y5P2 127 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 FLVCR1Q9Y5Y0 555 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 V9GYS6 101 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 SHANK3Q9BYB0 1731 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 A0A1B0GV50 99 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 MEIS3P2A8K0S8 358 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 RPL36A-HNRNPH2H7BZ11 118 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 J3QW42 95 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 PMS2P2O95744 297 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 IL3P08700 152 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 MRPL3P09001 348 aaKnown RBP7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 CXCL1P09341 107 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 TSFMP43897 325 aaKnown RBP7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 PAX5Q02548 391 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 CTSL3PQ5NE16 218 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 MRM1Q6IN84 353 aaKnown RBP7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 FBXO42Q6P3S6 717 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 DRAM2Q6UX65 266 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 C17orf64Q86WR6 236 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 LRRC56Q8IYG6 542 aaPredicted RBP7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 OR1J2Q8NGS2 313 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 OR6N1Q8NGY5 312 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 METTL21AQ8WXB1 218 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 NUDT11Q96G61 164 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms