RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 KIAA0895LQ68EN5 471 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 OR10K1Q8NGX5 313 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 TMEM129A0AVI4 362 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 CD300LBA8K4G0 201 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 CSNK1A1P48729 337 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 POLR2HP52434 150 aaKnown RBP13.4□□□□□ -0.26
PRDM16-203ENST00000378391 TNFRSF17Q02223 184 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 TEKQ02763 1124 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 BEX5Q5H9J7 111 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 VASNQ6EMK4 673 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 PET117Q6UWS5 81 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 OR10Z1Q8NGY1 313 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 FYTTD1Q96QD9 318 aaKnown RBP13.4□□□□□ -0.26
PRDM16-203ENST00000378391 INSM2Q96T92 566 aaPredicted RBP13.4□□□□□ -0.26
PRDM16-203ENST00000378391 GABARAPL3Q9BY60 117 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 RLIMQ9NVW2 624 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 CYB5R1Q9UHQ9 305 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 SLCO2B1O94956 709 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 ATP1B1P05026 303 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 CLEC2LP0C7M8 214 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 S100A11P31949 105 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 CCR9P51686 369 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 FOXK2Q01167 660 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 CRMP1Q14194 572 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 MRPL21Q7Z2W9 205 aaKnown RBP13.4□□□□□ -0.26
PRDM16-203ENST00000378391 LIMS2Q7Z4I7 341 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 TECPR1Q7Z6L1 1165 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 CMIPQ8IY22 773 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 NANOGP1Q8N7R0 232 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 OR51Q1Q8NH59 317 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 CNTNAP3Q9BZ76 1288 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 NOX4Q9NPH5 578 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 B3GNT2Q9NY97 397 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 SRPK3Q9UPE1 567 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 PUS1Q9Y606 427 aaKnown RBP eCLIP13.4□□□□□ -0.26
PRDM16-203ENST00000378391 F3P13726 295 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 SLC14A1Q13336 389 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 TNK1Q13470 666 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 HTR4Q13639 388 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 B3GLCTQ6Y288 498 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 OR6T1Q8NGN1 323 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 SENP5Q96HI0 755 aaPredicted RBP13.4□□□□□ -0.26
PRDM16-203ENST00000378391 CCNL2Q96S94 520 aaPredicted RBP13.4□□□□□ -0.26
PRDM16-203ENST00000378391 EHFQ9NZC4 300 aa13.4□□□□□ -0.26
PRDM16-203ENST00000378391 RBBP6Q7Z6E9 1792 aaKnown RBP13.4□□□□□ -0.26
PRDM16-203ENST00000378391 TRABD2BA6NFA1 517 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 ZNF264O43296 627 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 LALBAP00709 142 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 F13BP05160 661 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 PPT1P50897 306 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 CLDN12P56749 244 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 RPS15P62841 145 aaKnown RBP13.39□□□□□ -0.27
PRDM16-203ENST00000378391 PHYHD1Q5SRE7 291 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 C18orf63Q68DL7 685 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 FAM71E1Q6IPT2 247 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 NDUFAF7Q7L592 441 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 GPR155Q7Z3F1 870 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 TM4SF18Q96CE8 201 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 SMIM3Q9BZL3 60 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 A0A1B0GV72 72 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 PRSS38A1L453 326 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 B4DXG7 233 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 GATCO43716 136 aaKnown RBP13.39□□□□□ -0.27
PRDM16-203ENST00000378391 MED6O75586 246 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 EPHA1P21709 976 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 HTR2CP28335 458 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 CSRP3P50461 194 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 EFNA3P52797 238 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 ECH1Q13011 328 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 KLHDC1Q8N7A1 406 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 SLC25A46Q96AG3 418 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 AMDHD1Q96NU7 426 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 TOLLIPQ9H0E2 274 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 CLEC2DQ9UHP7 191 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 KDM4EB2RXH2 506 aaPredicted RBP13.39□□□□□ -0.27
PRDM16-203ENST00000378391 DRD1P21728 446 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 CARD18P57730 90 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 SUMO1P63165 101 aaKnown RBP13.39□□□□□ -0.27
PRDM16-203ENST00000378391 ASAH1Q13510 395 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 RPE65Q16518 533 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 MSRB3Q8IXL7 192 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 ZNF595Q8IYB9 648 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 ZNF740Q8NDX6 193 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 OR4D10Q8NGI6 311 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 GLIPR2Q9H4G4 154 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 SURF4O15260 269 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 IGHG1P01857 330 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 C1QBP02746 253 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 GABRR1P24046 479 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 PFN3P60673 137 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 SMUG1Q53HV7 270 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 TRAPPC6BQ86SZ2 158 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 OR56B1Q8NGI3 324 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 STARD5Q9NSY2 213 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 FAM212BQ9NTI7 297 aaPredicted RBP13.39□□□□□ -0.27
PRDM16-203ENST00000378391 CPNE7Q9UBL6 633 aa13.39□□□□□ -0.27
PRDM16-203ENST00000378391 FAM227AF5H4B4 570 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 M0R082 166 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 SDC3O75056 442 aa13.38□□□□□ -0.27
PRDM16-203ENST00000378391 SLC2A1P11166 492 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms