RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 ANKRD53Q8N9V6 530 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 SPHK2Q9NRA0 654 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 CBLCQ9ULV8 474 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 FGF4P08620 206 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 CD1CP29017 333 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 DMRT3Q9NQL9 472 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 MRPS28Q9Y2Q9 187 aaKnown RBP10.81□□□□□ -0.68
VPS13A-205ENST00000376636 NID2Q14112 1375 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 TRPM6Q9BX84 2022 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 CDH26Q8IXH8 852 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 FUBP1Q96AE4 644 aaKnown RBP10.81□□□□□ -0.68
VPS13A-205ENST00000376636 DUSP23Q9BVJ7 150 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 ARNTP27540 789 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 C11orf49Q9H6J7 331 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 PCDHGA9Q9Y5G4 932 aaKnown RBP10.81□□□□□ -0.68
VPS13A-205ENST00000376636 ZNF727A8MUV8 499 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 CDCA2Q69YH5 1023 aaPredicted RBP10.81□□□□□ -0.68
VPS13A-205ENST00000376636 ZNF551Q7Z340 670 aaPredicted RBP10.81□□□□□ -0.68
VPS13A-205ENST00000376636 GRAMD2AQ8IUY3 354 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 OR2L13Q8N349 312 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 IKZF5Q9H5V7 419 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 SVILO95425 2214 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 FGF18O76093 207 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 TIPARPQ7Z3E1 657 aaKnown RBP10.81□□□□□ -0.68
VPS13A-205ENST00000376636 MOCOSQ96EN8 888 aa10.81□□□□□ -0.68
VPS13A-205ENST00000376636 LRRC3CA6NJW4 275 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 ABCD4O14678 606 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 ATXN1LP0C7T5 689 aaKnown RBP10.8□□□□□ -0.68
VPS13A-205ENST00000376636 LTC4SQ16873 150 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 NFS1Q9Y697 457 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 DCCP43146 1447 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 HSD17B6O14756 317 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 SOD2P04179 222 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 CR2P20023 1033 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 OR2B8PP59922 312 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 OR1Q1Q15612 314 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 OR4F15Q8NGB8 312 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 CD99L2Q8TCZ2 262 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 RASD2Q96D21 266 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 SLC29A1Q99808 456 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 SLX4Q8IY92 1834 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 CABIN1Q9Y6J0 2220 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 GALR3O60755 368 aaPredicted RBP10.8□□□□□ -0.68
VPS13A-205ENST00000376636 PMP2P02689 132 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 DVL3Q92997 716 aaPredicted RBP10.8□□□□□ -0.68
VPS13A-205ENST00000376636 EGLN1Q9GZT9 426 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 WWTR1Q9GZV5 400 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 FAM208AQ9UK61 1670 aaKnown RBP10.8□□□□□ -0.68
VPS13A-205ENST00000376636 COCHO43405 550 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 GIPP09681 153 aaPredicted RBP10.8□□□□□ -0.68
VPS13A-205ENST00000376636 HAPLN1P10915 354 aaPredicted RBP10.8□□□□□ -0.68
VPS13A-205ENST00000376636 HIST1H3AP68431 136 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 SIRPAP78324 504 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 SLC35A1P78382 337 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 SEC22AQ96IW7 307 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 MED18Q9BUE0 208 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 PEAK1Q9H792 1746 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 TCRBP04435 133 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 GTDC1Q4AE62 458 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 UMODL1-AS1Q8N2C9 162 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 NOX4Q9NPH5 578 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 BCL9LQ86UU0 1499 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 PPP1CBP62140 327 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 ZNF485Q8NCK3 441 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 BRI3BPQ8WY22 251 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 PLIN4Q96Q06 1357 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 A0A0U1RQF3 1178 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 PODNL1Q6PEZ8 512 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 TSACCQ96A04 125 aaPredicted RBP10.8□□□□□ -0.68
VPS13A-205ENST00000376636 CIB3Q96Q77 187 aaPredicted RBP10.8□□□□□ -0.68
VPS13A-205ENST00000376636 IGLV3-22A0A075B6J6 115 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 SSSCA1O60232 199 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 TBC1D28Q2M2D7 210 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 TOR2AQ5JU69 321 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 PPP1R3BQ86XI6 285 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 OR10X1Q8NGY0 326 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 ASH2LQ9UBL3 628 aa10.8□□□□□ -0.68
VPS13A-205ENST00000376636 ROBO1Q9Y6N7 1651 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 GPR171O14626 319 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 PLSCR1O15162 318 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 LAMTOR5O43504 91 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 CASP7P55210 303 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 GABREP78334 506 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 TXNRD3NBQ6F5E7 133 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 ZNF852Q6ZMS4 543 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 NECAP1Q8NC96 275 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 OR2A1Q8NGT9 310 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 MST1RQ04912 1400 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 HNRNPA1P09651 372 aaKnown RBP eCLIP10.79□□□□□ -0.68
VPS13A-205ENST00000376636 PQLC3Q8N755 202 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 PARD6AQ9NPB6 346 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 A0A0G2JLL6 359 aaPredicted RBP10.79□□□□□ -0.68
VPS13A-205ENST00000376636 ANTXRLA6NF34 631 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 RFPL4AA6NLU0 287 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 RFPL4AL1F8VTS6 287 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 ST8SIA3O43173 380 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 OR7C2O60412 319 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 PTAFRP25105 342 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 PRRT2Q7Z6L0 340 aaPredicted RBP10.79□□□□□ -0.68
VPS13A-205ENST00000376636 MTMR14Q8NCE2 650 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms