RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 POMT2Q9UKY4 750 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 A0A1B0GV50 99 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 TRAPPC2LH3BP13 241 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 GPR171O14626 319 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 ADAM23O75077 832 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 HLA-AP01891 365 aaKnown RBP12.5□□□□□ -0.41
C9orf47-203ENST00000375851 HIST1H1CP16403 213 aaKnown RBP12.5□□□□□ -0.41
C9orf47-203ENST00000375851 NKG7Q16617 165 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 CALHM3Q86XJ0 350 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 GLYATL2Q8WU03 294 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 PLA2G2FQ9BZM2 168 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 SELENOIQ9C0D9 397 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 SLA2Q9H6Q3 261 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 PCDHGA1Q9Y5H4 931 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 A0A0A6YYD5 115 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 TRIM64A6NGJ6 449 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 LMO7DNF2Z398 122 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 TNFRSF10AO00220 468 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 PEX14O75381 377 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 GLB1P16278 677 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 CAMLGP49069 296 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 CX3CR1P49238 355 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 GALEQ14376 348 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 IHHQ14623 411 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 RTL6Q6ICC9 239 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 OR56B1Q8NGI3 324 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 C8orf44Q96CB5 159 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 PSD2Q9BQI7 771 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 NTN4Q9HB63 628 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 TRIP11Q15643 1979 aa12.5□□□□□ -0.41
C9orf47-203ENST00000375851 PLSCR5A0PG75 271 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 OR2W5A6NFC9 320 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 SRMP19623 302 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 APOBEC1P41238 236 aaKnown RBP12.49□□□□□ -0.41
C9orf47-203ENST00000375851 MRPL19P49406 292 aaKnown RBP12.49□□□□□ -0.41
C9orf47-203ENST00000375851 RHEBQ15382 184 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 KCNG3Q8TAE7 436 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 RGCCQ9H4X1 137 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 CALHM2Q9HA72 323 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 PRDM7Q9NQW5 492 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 TEKQ02763 1124 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 TNK1Q13470 666 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 ZNF813Q6ZN06 617 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 TP53I13Q8NBR0 393 aaPredicted RBP12.49□□□□□ -0.41
C9orf47-203ENST00000375851 GIMAP1Q8WWP7 306 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 FGGYQ96C11 551 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 SLC38A1Q9H2H9 487 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 OR52A1Q9UKL2 312 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 MED16Q9Y2X0 877 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 APC2O95996 2303 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 UBCP0CG48 685 aaKnown RBP12.49□□□□□ -0.41
C9orf47-203ENST00000375851 EPHA1P21709 976 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 RBMS2Q15434 407 aaKnown RBP12.49□□□□□ -0.41
C9orf47-203ENST00000375851 GLYATL3Q5SZD4 288 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 FCRL6Q6DN72 434 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 FAM109BQ6ICB4 259 aaPredicted RBP12.49□□□□□ -0.41
C9orf47-203ENST00000375851 SYT13Q7L8C5 426 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 DEFB123Q8N688 67 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 KIAA1958Q8N8K9 716 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 GOT1L1Q8NHS2 421 aaPredicted RBP12.49□□□□□ -0.41
C9orf47-203ENST00000375851 RAB3CQ96E17 227 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 TCEAL2Q9H3H9 227 aaPredicted RBP12.49□□□□□ -0.41
C9orf47-203ENST00000375851 NELFAQ9H3P2 528 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 RANGRFQ9HD47 186 aaPredicted RBP12.49□□□□□ -0.41
C9orf47-203ENST00000375851 WSB2Q9NYS7 404 aaPredicted RBP12.49□□□□□ -0.41
C9orf47-203ENST00000375851 SH3BGRL2Q9UJC5 107 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 MRPS28Q9Y2Q9 187 aaKnown RBP12.49□□□□□ -0.41
C9orf47-203ENST00000375851 DPM1O60762 260 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 GPX5O75715 221 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 CD1EP15812 388 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 PRKACBP22694 351 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 HNRNPFP52597 415 aaKnown RBP12.49□□□□□ -0.41
C9orf47-203ENST00000375851 GPR176Q14439 515 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 LINC00299Q6ZSB3 139 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 MSRB3Q8IXL7 192 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 IFI44Q8TCB0 444 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 TCEAL3Q969E4 200 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 MIB2Q96AX9 1013 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 C11orf54Q9H0W9 315 aaPredicted RBP12.49□□□□□ -0.41
C9orf47-203ENST00000375851 LIN7BQ9HAP6 207 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 OBP2BQ9NPH6 170 aa12.49□□□□□ -0.41
C9orf47-203ENST00000375851 ACTL6BO94805 426 aa12.48□□□□□ -0.41
C9orf47-203ENST00000375851 PAPLNO95428 1278 aa12.48□□□□□ -0.41
C9orf47-203ENST00000375851 CLDN6P56747 220 aa12.48□□□□□ -0.41
C9orf47-203ENST00000375851 NPSR1Q6W5P4 371 aa12.48□□□□□ -0.41
C9orf47-203ENST00000375851 IDO2Q6ZQW0 420 aa12.48□□□□□ -0.41
C9orf47-203ENST00000375851 KIF18BQ86Y91 864 aa12.48□□□□□ -0.41
C9orf47-203ENST00000375851 OR11A1Q9GZK7 315 aa12.48□□□□□ -0.41
C9orf47-203ENST00000375851 ABHD16AO95870 558 aa12.48□□□□□ -0.41
C9orf47-203ENST00000375851 SLC2A1P11166 492 aa12.48□□□□□ -0.41
C9orf47-203ENST00000375851 ACKR1Q16570 336 aa12.48□□□□□ -0.41
C9orf47-203ENST00000375851 SLC36A2Q495M3 483 aa12.48□□□□□ -0.41
C9orf47-203ENST00000375851 ZNF684Q5T5D7 378 aa12.48□□□□□ -0.41
C9orf47-203ENST00000375851 GPR157Q5UAW9 335 aa12.48□□□□□ -0.41
C9orf47-203ENST00000375851 OR6V1Q8N148 313 aa12.48□□□□□ -0.41
C9orf47-203ENST00000375851 SLC22A24Q8N4F4 322 aa12.48□□□□□ -0.41
C9orf47-203ENST00000375851 PLPP7Q8NBV4 271 aa12.48□□□□□ -0.41
C9orf47-203ENST00000375851 OR5M1Q8NGP8 315 aa12.48□□□□□ -0.41
C9orf47-203ENST00000375851 ABHD5Q8WTS1 349 aa12.48□□□□□ -0.41
C9orf47-203ENST00000375851 HSD17B8Q92506 261 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms