RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 RPS21P63220 83 aaKnown RBP19.22■□□□□ 0.67
UPF3A-202ENST00000375299 FAM74A3Q4VXF1 159 aa19.22■□□□□ 0.67
UPF3A-202ENST00000375299 LY6G6FQ5SQ64 297 aa19.22■□□□□ 0.67
UPF3A-202ENST00000375299 FIGLAQ6QHK4 219 aa19.22■□□□□ 0.67
UPF3A-202ENST00000375299 OR10AC1Q8NH08 325 aa19.22■□□□□ 0.67
UPF3A-202ENST00000375299 OR8K3Q8NH51 312 aa19.22■□□□□ 0.67
UPF3A-202ENST00000375299 TMEM106AQ96A25 262 aa19.22■□□□□ 0.67
UPF3A-202ENST00000375299 OR2M4Q96R27 311 aa19.22■□□□□ 0.67
UPF3A-202ENST00000375299 COMMD4Q9H0A8 199 aa19.22■□□□□ 0.67
UPF3A-202ENST00000375299 POFUT1Q9H488 388 aa19.22■□□□□ 0.67
UPF3A-202ENST00000375299 MRTO4Q9UKD2 239 aaKnown RBP19.22■□□□□ 0.67
UPF3A-202ENST00000375299 A0A0D9SG52 128 aa19.21■□□□□ 0.67
UPF3A-202ENST00000375299 MTRF1O75570 445 aaKnown RBP19.21■□□□□ 0.67
UPF3A-202ENST00000375299 PMS2P2O95744 297 aa19.21■□□□□ 0.67
UPF3A-202ENST00000375299 ITGB2P05107 769 aa19.21■□□□□ 0.67
UPF3A-202ENST00000375299 GLULP15104 373 aa19.21■□□□□ 0.67
UPF3A-202ENST00000375299 C5AR1P21730 350 aa19.21■□□□□ 0.67
UPF3A-202ENST00000375299 AGTR1P30556 359 aa19.21■□□□□ 0.67
UPF3A-202ENST00000375299 PRSS3P35030 304 aa19.21■□□□□ 0.67
UPF3A-202ENST00000375299 ZNF141Q15928 474 aa19.21■□□□□ 0.67
UPF3A-202ENST00000375299 STEAP1BQ6NZ63 245 aa19.21■□□□□ 0.67
UPF3A-202ENST00000375299 ZNF546Q86UE3 836 aa19.21■□□□□ 0.67
UPF3A-202ENST00000375299 TMEM17Q86X19 198 aa19.21■□□□□ 0.67
UPF3A-202ENST00000375299 CDC20BQ86Y33 519 aa19.21■□□□□ 0.67
UPF3A-202ENST00000375299 ZNF676Q8N7Q3 588 aa19.21■□□□□ 0.67
UPF3A-202ENST00000375299 CLEC1AQ8NC01 280 aa19.21■□□□□ 0.67
UPF3A-202ENST00000375299 OR8S1Q8NH09 359 aa19.21■□□□□ 0.67
UPF3A-202ENST00000375299 CCDC107Q8WV48 283 aa19.21■□□□□ 0.67
UPF3A-202ENST00000375299 DVL3Q92997 716 aaPredicted RBP19.21■□□□□ 0.67
UPF3A-202ENST00000375299 IKZF2Q9UKS7 526 aa19.21■□□□□ 0.67
UPF3A-202ENST00000375299 ADH1BP00325 375 aa19.21■□□□□ 0.67
UPF3A-202ENST00000375299 CD96P40200 585 aa19.21■□□□□ 0.67
UPF3A-202ENST00000375299 MC2RQ01718 297 aa19.21■□□□□ 0.67
UPF3A-202ENST00000375299 ZNHIT3Q15649 155 aaPredicted RBP19.21■□□□□ 0.67
UPF3A-202ENST00000375299 C2orf27AQ580R0 203 aa19.21■□□□□ 0.67
UPF3A-202ENST00000375299 FAM74A1Q5RGS3 127 aa19.21■□□□□ 0.67
UPF3A-202ENST00000375299 PSRC1Q6PGN9 363 aaPredicted RBP19.21■□□□□ 0.67
UPF3A-202ENST00000375299 BIVMQ86UB2 503 aa19.21■□□□□ 0.67
UPF3A-202ENST00000375299 CA13Q8N1Q1 262 aa19.21■□□□□ 0.67
UPF3A-202ENST00000375299 C12orf45Q8N5I9 185 aaPredicted RBP19.21■□□□□ 0.67
UPF3A-202ENST00000375299 OR2G2Q8NGZ5 317 aa19.21■□□□□ 0.67
UPF3A-202ENST00000375299 GPR148Q8TDV2 347 aa19.21■□□□□ 0.67
UPF3A-202ENST00000375299 ANKRD9Q96BM1 317 aaPredicted RBP19.21■□□□□ 0.67
UPF3A-202ENST00000375299 SLC17A9Q9BYT1 436 aa19.21■□□□□ 0.67
UPF3A-202ENST00000375299 TAS2R3Q9NYW6 316 aa19.21■□□□□ 0.67
UPF3A-202ENST00000375299 UPB1Q9UBR1 384 aa19.21■□□□□ 0.67
UPF3A-202ENST00000375299 DPP7Q9UHL4 492 aa19.21■□□□□ 0.67
UPF3A-202ENST00000375299 ZNF175Q9Y473 711 aa19.21■□□□□ 0.67
UPF3A-202ENST00000375299 A0A1W2PQU0 124 aa19.2■□□□□ 0.66
UPF3A-202ENST00000375299 H0YGG7 62 aa19.2■□□□□ 0.66
UPF3A-202ENST00000375299 MELTFP08582 738 aa19.2■□□□□ 0.66
UPF3A-202ENST00000375299 OR4E1P0C645 316 aa19.2■□□□□ 0.66
UPF3A-202ENST00000375299 POU3F4P49335 361 aa19.2■□□□□ 0.66
UPF3A-202ENST00000375299 ARF3P61204 181 aaPredicted RBP19.2■□□□□ 0.66
UPF3A-202ENST00000375299 SSBP1Q04837 148 aaKnown RBP19.2■□□□□ 0.66
UPF3A-202ENST00000375299 PRRT3Q5FWE3 981 aa19.2■□□□□ 0.66
UPF3A-202ENST00000375299 MOB3CQ70IA8 216 aa19.2■□□□□ 0.66
UPF3A-202ENST00000375299 LSM14AQ8ND56 463 aaKnown RBP19.2■□□□□ 0.66
UPF3A-202ENST00000375299 OR51A4Q8NGJ6 313 aa19.2■□□□□ 0.66
UPF3A-202ENST00000375299 ATOH1Q92858 354 aaPredicted RBP19.2■□□□□ 0.66
UPF3A-202ENST00000375299 SCARF2Q96GP6 870 aaPredicted RBP19.2■□□□□ 0.66
UPF3A-202ENST00000375299 NKX6-2Q9C056 277 aaPredicted RBP19.2■□□□□ 0.66
UPF3A-202ENST00000375299 HPF1Q9NWY4 346 aa19.2■□□□□ 0.66
UPF3A-202ENST00000375299 TRBV23OR9-2A0A075B6M9 112 aa19.2■□□□□ 0.66
UPF3A-202ENST00000375299 PRSS38A1L453 326 aa19.2■□□□□ 0.66
UPF3A-202ENST00000375299 OR6C74A6NCV1 312 aa19.2■□□□□ 0.66
UPF3A-202ENST00000375299 TMEM212A6NML5 194 aa19.2■□□□□ 0.66
UPF3A-202ENST00000375299 EFCAB7A8K855 629 aa19.2■□□□□ 0.66
UPF3A-202ENST00000375299 SRPX2O60687 465 aaPredicted RBP19.2■□□□□ 0.66
UPF3A-202ENST00000375299 WNT11O96014 354 aa19.2■□□□□ 0.66
UPF3A-202ENST00000375299 CFPP27918 469 aa19.2■□□□□ 0.66
UPF3A-202ENST00000375299 AQP2P41181 271 aa19.2■□□□□ 0.66
UPF3A-202ENST00000375299 PABPC1L2AQ5JQF8 200 aa19.2■□□□□ 0.66
UPF3A-202ENST00000375299 PDSS1Q5T2R2 415 aa19.2■□□□□ 0.66
UPF3A-202ENST00000375299 FAM122BQ7Z309 247 aa19.2■□□□□ 0.66
UPF3A-202ENST00000375299 BPIFCQ8NFQ6 507 aa19.2■□□□□ 0.66
UPF3A-202ENST00000375299 RERGQ96A58 199 aaPredicted RBP19.2■□□□□ 0.66
UPF3A-202ENST00000375299 ZFYVE21Q9BQ24 234 aa19.2■□□□□ 0.66
UPF3A-202ENST00000375299 YBX2Q9Y2T7 364 aaKnown RBP19.2■□□□□ 0.66
UPF3A-202ENST00000375299 CDH23Q9H251 3354 aa19.19■□□□□ 0.66
UPF3A-202ENST00000375299 PCP4L1A6NKN8 68 aa19.19■□□□□ 0.66
UPF3A-202ENST00000375299 BLOC1S5-TXNDC5H3BN57 136 aa19.19■□□□□ 0.66
UPF3A-202ENST00000375299 H3BSH0 61 aa19.19■□□□□ 0.66
UPF3A-202ENST00000375299 CDC40O60508 579 aaKnown RBP eCLIP19.19■□□□□ 0.66
UPF3A-202ENST00000375299 STARP49675 285 aa19.19■□□□□ 0.66
UPF3A-202ENST00000375299 GABRG1Q8N1C3 465 aa19.19■□□□□ 0.66
UPF3A-202ENST00000375299 BEST3Q8N1M1 668 aa19.19■□□□□ 0.66
UPF3A-202ENST00000375299 EDAQ92838 391 aa19.19■□□□□ 0.66
UPF3A-202ENST00000375299 C3orf49Q96BT1 292 aa19.19■□□□□ 0.66
UPF3A-202ENST00000375299 LAMP5Q9UJQ1 280 aa19.19■□□□□ 0.66
UPF3A-202ENST00000375299 HEATR5AQ86XA9 2040 aa19.19■□□□□ 0.66
UPF3A-202ENST00000375299 NPIPB9F8W1W9 429 aa19.19■□□□□ 0.66
UPF3A-202ENST00000375299 OR10H2O60403 315 aa19.19■□□□□ 0.66
UPF3A-202ENST00000375299 CD8AP01732 235 aa19.19■□□□□ 0.66
UPF3A-202ENST00000375299 FNTBP49356 437 aa19.19■□□□□ 0.66
UPF3A-202ENST00000375299 GRM7Q14831 915 aa19.19■□□□□ 0.66
UPF3A-202ENST00000375299 TMEM240Q5SV17 173 aa19.19■□□□□ 0.66
UPF3A-202ENST00000375299 SHEQ5VZ18 495 aa19.19■□□□□ 0.66
UPF3A-202ENST00000375299 KCNRGQ8N5I3 272 aa19.19■□□□□ 0.66
UPF3A-202ENST00000375299 STEAP2Q8NFT2 490 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms