RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 ENTPD6O75354 484 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 LATS1O95835 1130 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 AKR1C4P17516 323 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 CSNK2A2P19784 350 aaPredicted RBP8.17□□□□□ -1.1
UBR4-201ENST00000375218 CA5AP35218 305 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 ARR3P36575 388 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 MATKP42679 507 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 RFX3P48380 749 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 RPL34P49207 117 aaKnown RBP8.17□□□□□ -1.1
UBR4-201ENST00000375218 MLLT11Q13015 90 aaPredicted RBP8.17□□□□□ -1.1
UBR4-201ENST00000375218 RTP5Q14D33 572 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 ACKR1Q16570 336 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 AGAP7PQ5VUJ5 663 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 BAIAP2L2Q6UXY1 529 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 TMEM217Q8N7C4 229 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 GATSQ8NAP1 163 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 SLC7A13Q8TCU3 470 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 DCAKDQ8WVC6 231 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 ZG16BQ96DA0 208 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 CNN2Q99439 309 aaKnown RBP8.17□□□□□ -1.1
UBR4-201ENST00000375218 SPAG4Q9NPE6 437 aa8.17□□□□□ -1.1
UBR4-201ENST00000375218 ELF5Q9UKW6 265 aaPredicted RBP8.17□□□□□ -1.1
UBR4-201ENST00000375218 A0A087WV48 116 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 MEIOCA2RUB1 952 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 PROB1E7EW31 1015 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 ATG12O94817 140 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 IGSF6O95976 241 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 CD48P09326 243 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 NR0B1P51843 470 aaKnown RBP8.16□□□□□ -1.1
UBR4-201ENST00000375218 FKBP1BP68106 108 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 CEACAM7Q14002 265 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 RGMBQ6NW40 437 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 GRASPQ7Z6J2 395 aaPredicted RBP8.16□□□□□ -1.1
UBR4-201ENST00000375218 ZC3HC1Q86WB0 502 aaKnown RBP8.16□□□□□ -1.1
UBR4-201ENST00000375218 ZNF547Q8IVP9 402 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 TTYH2Q9BSA4 534 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 DUSP15Q9H1R2 295 aaPredicted RBP8.16□□□□□ -1.1
UBR4-201ENST00000375218 PIGMQ9H3S5 423 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 BOD1L1Q8NFC6 3051 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 LEFTY2O00292 366 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 PAPSS2O95340 614 aaPredicted RBP8.16□□□□□ -1.1
UBR4-201ENST00000375218 RPLP0P05388 317 aaKnown RBP8.16□□□□□ -1.1
UBR4-201ENST00000375218 ATP5A1P25705 553 aaKnown RBP8.16□□□□□ -1.1
UBR4-201ENST00000375218 VHLP40337 213 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 RAE1P78406 368 aaKnown RBP8.16□□□□□ -1.1
UBR4-201ENST00000375218 RSU1Q15404 277 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 CYP51A1Q16850 503 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 TPRG1LQ5T0D9 272 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 SAXO2Q658L1 398 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 SPRED2Q7Z698 418 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 ACOT1Q86TX2 421 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 OR2Z1Q8NG97 314 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 DNASE2BQ8WZ79 361 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 CPXM1Q96SM3 734 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 XPR1Q9UBH6 696 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 ZNF106Q9H2Y7 1883 aaKnown RBP8.16□□□□□ -1.1
UBR4-201ENST00000375218 A0A087X1B8 175 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 A0A1W2PPC1 479 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 GMNCA6NCL1 334 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 IMPA2O14732 288 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 SLC16A5O15375 505 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 SIGLEC6O43699 453 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 ZNF623O75123 536 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 HTR2AP28223 471 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 TIA1P31483 386 aaKnown RBP eCLIP8.16□□□□□ -1.12e-6■■■□□ 18.3
UBR4-201ENST00000375218 SSTR5P35346 364 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 CCL7P80098 99 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 APOFQ13790 326 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 RAB39AQ14964 217 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 RBMS2Q15434 407 aaKnown RBP8.16□□□□□ -1.1
UBR4-201ENST00000375218 ZNF630Q2M218 657 aaPredicted RBP8.16□□□□□ -1.1
UBR4-201ENST00000375218 PGGHGQ32M88 737 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 ZNF585AQ6P3V2 769 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 NRARPQ7Z6K4 114 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 TP53INP2Q8IXH6 220 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 TXNDC5Q8NBS9 432 aaKnown RBP8.16□□□□□ -1.1
UBR4-201ENST00000375218 JOSD2Q8TAC2 188 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 SFXN5Q8TD22 340 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 MRPS31Q92665 395 aaKnown RBP8.16□□□□□ -1.1
UBR4-201ENST00000375218 WDR34Q96EX3 536 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 MRGPRX2Q96LB1 330 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 PPP3R2Q96LZ3 170 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 ZNF599Q96NL3 588 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 VN1R3Q9BXE9 311 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 CDIP1Q9H305 208 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 SEMA4GQ9NTN9 838 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 USP22Q9UPT9 525 aa8.16□□□□□ -1.1
UBR4-201ENST00000375218 PRSS46E5RG02 174 aa8.15□□□□□ -1.1
UBR4-201ENST00000375218 CD1CP29017 333 aa8.15□□□□□ -1.1
UBR4-201ENST00000375218 GLUD2P49448 558 aa8.15□□□□□ -1.1
UBR4-201ENST00000375218 EFNA3P52797 238 aa8.15□□□□□ -1.1
UBR4-201ENST00000375218 IRX4P78413 519 aa8.15□□□□□ -1.1
UBR4-201ENST00000375218 C6orf226Q5I0X4 101 aa8.15□□□□□ -1.1
UBR4-201ENST00000375218 UTF1Q5T230 341 aa8.15□□□□□ -1.1
UBR4-201ENST00000375218 TCTN3Q6NUS6 607 aa8.15□□□□□ -1.1
UBR4-201ENST00000375218 PDSS2Q86YH6 399 aa8.15□□□□□ -1.1
UBR4-201ENST00000375218 GPD1LQ8N335 351 aa8.15□□□□□ -1.1
UBR4-201ENST00000375218 EBF4Q9BQW3 602 aa8.15□□□□□ -1.1
UBR4-201ENST00000375218 MRPL45Q9BRJ2 306 aaKnown RBP8.15□□□□□ -1.1
UBR4-201ENST00000375218 DDA1Q9BW61 102 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms