RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 PRAMEF2O60811 474 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 ZNF217O75362 1048 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 LDOC1O95751 146 aaPredicted RBP10.1□□□□□ -0.79
CCDC40-203ENST00000374877 CEACAM5P06731 702 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 KCNAB1Q14722 419 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 LIPNQ5VXI9 398 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 KRT77Q7Z794 578 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 BOLLQ8N9W6 283 aaKnown RBP10.1□□□□□ -0.79
CCDC40-203ENST00000374877 TMEM52Q8NDY8 209 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 OR5T3Q8NGG3 340 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 STK35Q8TDR2 534 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 STACQ99469 402 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 ALG12Q9BV10 488 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 MRI1Q9BV20 369 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 CHRDQ9H2X0 955 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 MTFP1Q9UDX5 166 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 ETV7Q9Y603 341 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 SLC22A7Q9Y694 548 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 F5P12259 2224 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 TMEM272A0A1B0GTI8 110 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 A0A1B0GW55 424 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 CDC123O75794 336 aaPredicted RBP10.09□□□□□ -0.79
CCDC40-203ENST00000374877 SEMA4FO95754 770 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 HPP00738 406 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 DUX4L2P0CJ85 424 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 DUX4L3P0CJ86 424 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 DUX4L4P0CJ87 422 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 DUX4L5P0CJ88 424 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 DUX4L6P0CJ89 424 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 DUX4L7P0CJ90 424 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 RBM34P42696 430 aaKnown RBP10.09□□□□□ -0.79
CCDC40-203ENST00000374877 ACAA2P42765 397 aaKnown RBP10.09□□□□□ -0.79
CCDC40-203ENST00000374877 STARP49675 285 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 FBXO42Q6P3S6 717 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 TMED4Q7Z7H5 227 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 ZNF227Q86WZ6 799 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 CLRN3Q8NCR9 226 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 SCARF2Q96GP6 870 aaPredicted RBP10.09□□□□□ -0.79
CCDC40-203ENST00000374877 ADAD1Q96M93 576 aaKnown RBP10.09□□□□□ -0.79
CCDC40-203ENST00000374877 NPAS1Q99742 590 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 GAL3ST1Q99999 423 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 APOOQ9BUR5 198 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 ZNF426Q9BUY5 554 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 PRDM9Q9NQV7 894 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 DUX4Q9UBX2 424 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 SLC17A4Q9Y2C5 497 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 MRPS2Q9Y399 296 aaKnown RBP10.09□□□□□ -0.79
CCDC40-203ENST00000374877 DNAH14Q0VDD8 3507 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 TRAV8-7A0A075B6U6 113 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 TRAV18A0A075B6X5 111 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 DNASE2O00115 360 aaPredicted RBP10.09□□□□□ -0.79
CCDC40-203ENST00000374877 AQP8O94778 261 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 RASGRP1O95267 797 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 FBXO45P0C2W1 286 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 RAB3AP20336 220 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 HNRNPA2B1P22626 353 aaKnown RBP10.09□□□□□ -0.79
CCDC40-203ENST00000374877 MAPK3P27361 379 aaPredicted RBP10.09□□□□□ -0.79
CCDC40-203ENST00000374877 LSM14AQ8ND56 463 aaKnown RBP10.09□□□□□ -0.79
CCDC40-203ENST00000374877 OR4N2Q8NGD1 307 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 OR51D1Q8NGF3 324 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 SRMSQ9H3Y6 488 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 KCNK15Q9H427 330 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 DNAJB12Q9NXW2 375 aaKnown RBP10.09□□□□□ -0.79
CCDC40-203ENST00000374877 PLCL2Q9UPR0 1127 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 HS3ST3A1Q9Y663 406 aa10.09□□□□□ -0.79
CCDC40-203ENST00000374877 BLOC1S5-TXNDC5H3BN57 136 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 XRCC3O43542 346 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 CTSVO60911 334 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 AK1P00568 194 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 CSF1P09603 554 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 TACSTD2P09758 323 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 EFNB2P52799 333 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 MC2RQ01718 297 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 ALKBH1Q13686 389 aaKnown RBP10.08□□□□□ -0.8
CCDC40-203ENST00000374877 KIAA0895LQ68EN5 471 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 ULK3Q6PHR2 472 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 RD3Q7Z3Z2 195 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 ZNF546Q86UE3 836 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 SPEM1Q8N4L4 309 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 C10orf53Q8N6V4 93 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 ZNF676Q8N7Q3 588 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 OR52R1Q8NGF1 315 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 OR6K3Q8NGY3 331 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 OR10AC1Q8NH08 325 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 OR10G6Q8NH81 332 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 TMEM106AQ96A25 262 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 NKX3-1Q99801 234 aaPredicted RBP10.08□□□□□ -0.8
CCDC40-203ENST00000374877 ULBP3Q9BZM4 244 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 PCED1AQ9H1Q7 454 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 HPF1Q9NWY4 346 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 KLHDC2Q9Y2U9 406 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 COLEC10Q9Y6Z7 277 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 ATG2BQ96BY7 2078 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 NDUFA2O43678 99 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 GLCEO94923 617 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 APBB3O95704 486 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 EML2O95834 649 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 CD3DP04234 171 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 MPGP29372 298 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 AKT2P31751 481 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms