RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 LPAR3Q9UBY5 353 aa16.37■□□□□ 0.21
TMEM53-201ENST00000372235 CDC42EP3Q9UKI2 254 aa16.37■□□□□ 0.21
TMEM53-201ENST00000372235 CAPN7Q9Y6W3 813 aa16.37■□□□□ 0.21
TMEM53-201ENST00000372235 PLCE1Q9P212 2302 aa16.36■□□□□ 0.21
TMEM53-201ENST00000372235 FAM220BPB1ANY3 271 aa16.36■□□□□ 0.21
TMEM53-201ENST00000372235 LRRN3E7EW58 273 aa16.36■□□□□ 0.21
TMEM53-201ENST00000372235 hCG_2039718K7EN88 272 aa16.36■□□□□ 0.21
TMEM53-201ENST00000372235 NDUFAB1O14561 156 aa16.36■□□□□ 0.21
TMEM53-201ENST00000372235 HLA-HP01893 362 aa16.36■□□□□ 0.21
TMEM53-201ENST00000372235 OR8G3PP0DMU2 310 aa16.36■□□□□ 0.21
TMEM53-201ENST00000372235 NR4A1P22736 598 aa16.36■□□□□ 0.21
TMEM53-201ENST00000372235 THBS4P35443 961 aa16.36■□□□□ 0.21
TMEM53-201ENST00000372235 DAP3P51398 398 aaKnown RBP16.36■□□□□ 0.21
TMEM53-201ENST00000372235 RAB1AP62820 205 aa16.36■□□□□ 0.21
TMEM53-201ENST00000372235 HGFACQ04756 655 aa16.36■□□□□ 0.21
TMEM53-201ENST00000372235 SNTB2Q13425 540 aaKnown RBP16.36■□□□□ 0.21
TMEM53-201ENST00000372235 WDR88Q6ZMY6 472 aa16.36■□□□□ 0.21
TMEM53-201ENST00000372235 SPATA21Q7Z572 469 aa16.36■□□□□ 0.21
TMEM53-201ENST00000372235 LSRQ86X29 649 aaPredicted RBP16.36■□□□□ 0.21
TMEM53-201ENST00000372235 PRIMA1Q86XR5 153 aa16.36■□□□□ 0.21
TMEM53-201ENST00000372235 RBM45Q8IUH3 476 aaKnown RBP16.36■□□□□ 0.21
TMEM53-201ENST00000372235 OR2T12Q8NG77 320 aa16.36■□□□□ 0.21
TMEM53-201ENST00000372235 RP9Q8TA86 221 aaKnown RBP16.36■□□□□ 0.21
TMEM53-201ENST00000372235 C10orf82Q8WW14 230 aa16.36■□□□□ 0.21
TMEM53-201ENST00000372235 HTRA1Q92743 480 aa16.36■□□□□ 0.21
TMEM53-201ENST00000372235 ZNF583Q96ND8 569 aa16.36■□□□□ 0.21
TMEM53-201ENST00000372235 NOX3Q9HBY0 568 aa16.36■□□□□ 0.21
TMEM53-201ENST00000372235 DYNLRB1Q9NP97 96 aa16.36■□□□□ 0.21
TMEM53-201ENST00000372235 MED4Q9NPJ6 270 aa16.36■□□□□ 0.21
TMEM53-201ENST00000372235 FN1P02751 2386 aaKnown RBP16.36■□□□□ 0.21
TMEM53-201ENST00000372235 A0A096LNT2 108 aa16.35■□□□□ 0.21
TMEM53-201ENST00000372235 LOC100653049A0A140TA62 436 aa16.35■□□□□ 0.21
TMEM53-201ENST00000372235 GMNCA6NCL1 334 aa16.35■□□□□ 0.21
TMEM53-201ENST00000372235 MCIDASD6RGH6 385 aa16.35■□□□□ 0.21
TMEM53-201ENST00000372235 BLOC1S5-TXNDC5H3BN57 136 aa16.35■□□□□ 0.21
TMEM53-201ENST00000372235 FXYD1O00168 92 aa16.35■□□□□ 0.21
TMEM53-201ENST00000372235 KPNA4O00629 521 aaPredicted RBP16.35■□□□□ 0.21
TMEM53-201ENST00000372235 CCDC22O60826 627 aa16.35■□□□□ 0.21
TMEM53-201ENST00000372235 KRT34O76011 436 aa16.35■□□□□ 0.21
TMEM53-201ENST00000372235 LYPD3O95274 346 aa16.35■□□□□ 0.21
TMEM53-201ENST00000372235 THY1P04216 161 aa16.35■□□□□ 0.21
TMEM53-201ENST00000372235 CELA3BP08861 270 aa16.35■□□□□ 0.21
TMEM53-201ENST00000372235 B4GALT1P15291 398 aa16.35■□□□□ 0.21
TMEM53-201ENST00000372235 ZNF14P17017 642 aaPredicted RBP16.35■□□□□ 0.21
TMEM53-201ENST00000372235 KDELR2P33947 212 aa16.35■□□□□ 0.21
TMEM53-201ENST00000372235 NR4A2P43354 598 aa16.35■□□□□ 0.21
TMEM53-201ENST00000372235 PTDSS1P48651 473 aaKnown RBP16.35■□□□□ 0.21
TMEM53-201ENST00000372235 ZNF84P51523 738 aa16.35■□□□□ 0.21
TMEM53-201ENST00000372235 CLRN1P58418 232 aa16.35■□□□□ 0.21
TMEM53-201ENST00000372235 ST3GAL3Q11203 375 aa16.35■□□□□ 0.21
TMEM53-201ENST00000372235 C6orf52Q5T4I8 152 aa16.35■□□□□ 0.21
TMEM53-201ENST00000372235 GKAP1Q5VSY0 366 aaPredicted RBP16.35■□□□□ 0.21
TMEM53-201ENST00000372235 UGT2A3Q6UWM9 527 aa16.35■□□□□ 0.21
TMEM53-201ENST00000372235 SLC22A24Q8N4F4 322 aa16.35■□□□□ 0.21
TMEM53-201ENST00000372235 OR4D11Q8NGI4 311 aa16.35■□□□□ 0.21
TMEM53-201ENST00000372235 TMEM239Q8WW34 195 aa16.35■□□□□ 0.21
TMEM53-201ENST00000372235 LIPHQ8WWY8 451 aa16.35■□□□□ 0.21
TMEM53-201ENST00000372235 SGTBQ96EQ0 304 aa16.35■□□□□ 0.21
TMEM53-201ENST00000372235 DOK1Q99704 481 aa16.35■□□□□ 0.21
TMEM53-201ENST00000372235 MS4A5Q9H3V2 200 aa16.35■□□□□ 0.21
TMEM53-201ENST00000372235 SLC7A8Q9UHI5 535 aa16.35■□□□□ 0.21
TMEM53-201ENST00000372235 RIMS3Q9UJD0 308 aa16.35■□□□□ 0.21
TMEM53-201ENST00000372235 MED31Q9Y3C7 131 aa16.35■□□□□ 0.21
TMEM53-201ENST00000372235 ELOVL7A1L3X0 281 aa16.34■□□□□ 0.21
TMEM53-201ENST00000372235 NPIPB13A6NJU9 1138 aa16.34■□□□□ 0.21
TMEM53-201ENST00000372235 VWC2LB2RUY7 222 aa16.34■□□□□ 0.21
TMEM53-201ENST00000372235 NPIPB4C9JG80 1138 aa16.34■□□□□ 0.21
TMEM53-201ENST00000372235 DHHO43323 396 aa16.34■□□□□ 0.21
TMEM53-201ENST00000372235 SEC14L2O76054 403 aa16.34■□□□□ 0.21
TMEM53-201ENST00000372235 ZNF35P13682 527 aa16.34■□□□□ 0.21
TMEM53-201ENST00000372235 FUT1P19526 365 aa16.34■□□□□ 0.21
TMEM53-201ENST00000372235 GLRXP35754 106 aa16.34■□□□□ 0.21
TMEM53-201ENST00000372235 SELENOVP59797 346 aa16.34■□□□□ 0.21
TMEM53-201ENST00000372235 SELENOWP63302 87 aa16.34■□□□□ 0.21
TMEM53-201ENST00000372235 PIGFQ07326 219 aa16.34■□□□□ 0.21
TMEM53-201ENST00000372235 TAF11Q15544 211 aa16.34■□□□□ 0.21
TMEM53-201ENST00000372235 SLC36A2Q495M3 483 aa16.34■□□□□ 0.21
TMEM53-201ENST00000372235 TMEM53Q6P2H8 277 aa16.34■□□□□ 0.21
TMEM53-201ENST00000372235 DEF8Q6ZN54 512 aa16.34■□□□□ 0.21
TMEM53-201ENST00000372235 FNDC8Q8TC99 324 aa16.34■□□□□ 0.21
TMEM53-201ENST00000372235 KCNK17Q96T54 332 aa16.34■□□□□ 0.21
TMEM53-201ENST00000372235 PRSS27Q9BQR3 290 aa16.34■□□□□ 0.21
TMEM53-201ENST00000372235 LRMDAQ9H2I8 198 aa16.34■□□□□ 0.21
TMEM53-201ENST00000372235 KCNN2Q9H2S1 579 aa16.34■□□□□ 0.21
TMEM53-201ENST00000372235 GPR160Q9UJ42 338 aa16.34■□□□□ 0.21
TMEM53-201ENST00000372235 CR1P17927 2039 aa16.34■□□□□ 0.21
TMEM53-201ENST00000372235 CSPG4Q6UVK1 2322 aa16.34■□□□□ 0.21
TMEM53-201ENST00000372235 ZNF503-AS2A6NEH8 195 aa16.33■□□□□ 0.2
TMEM53-201ENST00000372235 GPRIN2O60269 458 aa16.33■□□□□ 0.2
TMEM53-201ENST00000372235 OR7A10O76100 309 aa16.33■□□□□ 0.2
TMEM53-201ENST00000372235 SERPINA5P05154 406 aa16.33■□□□□ 0.2
TMEM53-201ENST00000372235 PGA4P0DJD7 388 aa16.33■□□□□ 0.2
TMEM53-201ENST00000372235 PGA3P0DJD8 388 aa16.33■□□□□ 0.2
TMEM53-201ENST00000372235 GIPRP48546 466 aa16.33■□□□□ 0.2
TMEM53-201ENST00000372235 CRYBA2P53672 197 aa16.33■□□□□ 0.2
TMEM53-201ENST00000372235 ANKDD1AQ495B1 522 aa16.33■□□□□ 0.2
TMEM53-201ENST00000372235 IQCCQ4KMZ1 466 aa16.33■□□□□ 0.2
TMEM53-201ENST00000372235 LRRC23Q53EV4 343 aaPredicted RBP16.33■□□□□ 0.2
TMEM53-201ENST00000372235 CYBRD1Q53TN4 286 aa16.33■□□□□ 0.2
TMEM53-201ENST00000372235 KRT80Q6KB66 452 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms