RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 XKRYO14609 159 aa12.25□□□□□ -0.45
TPM3-211ENST00000368531 EI24O14681 340 aa12.25□□□□□ -0.45
TPM3-211ENST00000368531 IGHG1P01857 330 aa12.25□□□□□ -0.45
TPM3-211ENST00000368531 PGA4P0DJD7 388 aa12.25□□□□□ -0.45
TPM3-211ENST00000368531 PGA3P0DJD8 388 aa12.25□□□□□ -0.45
TPM3-211ENST00000368531 OSMP13725 252 aa12.25□□□□□ -0.45
TPM3-211ENST00000368531 TFF3Q07654 80 aa12.25□□□□□ -0.45
TPM3-211ENST00000368531 KRR1Q13601 381 aaKnown RBP12.25□□□□□ -0.45
TPM3-211ENST00000368531 LRRC36Q1X8D7 754 aa12.25□□□□□ -0.45
TPM3-211ENST00000368531 FBXL19-AS1Q494R0 122 aa12.25□□□□□ -0.45
TPM3-211ENST00000368531 GPR139Q6DWJ6 353 aa12.25□□□□□ -0.45
TPM3-211ENST00000368531 FAM122BQ7Z309 247 aa12.25□□□□□ -0.45
TPM3-211ENST00000368531 HDDC2Q7Z4H3 204 aa12.25□□□□□ -0.45
TPM3-211ENST00000368531 CBR4Q8N4T8 237 aa12.25□□□□□ -0.45
TPM3-211ENST00000368531 ARIH2OSQ8N7S6 290 aa12.25□□□□□ -0.45
TPM3-211ENST00000368531 OR4Q3Q8NH05 313 aa12.25□□□□□ -0.45
TPM3-211ENST00000368531 OR4K13Q8NH42 304 aa12.25□□□□□ -0.45
TPM3-211ENST00000368531 ZNF519Q8TB69 540 aa12.25□□□□□ -0.45
TPM3-211ENST00000368531 MAGEE2Q8TD90 523 aaPredicted RBP12.25□□□□□ -0.45
TPM3-211ENST00000368531 TMEM54Q969K7 222 aa12.25□□□□□ -0.45
TPM3-211ENST00000368531 EME1Q96AY2 570 aa12.25□□□□□ -0.45
TPM3-211ENST00000368531 ZNF837Q96EG3 531 aaPredicted RBP12.25□□□□□ -0.45
TPM3-211ENST00000368531 GPX7Q96SL4 187 aaPredicted RBP12.25□□□□□ -0.45
TPM3-211ENST00000368531 OSBPL10Q9BXB5 764 aa12.25□□□□□ -0.45
TPM3-211ENST00000368531 ULBP2Q9BZM5 246 aa12.25□□□□□ -0.45
TPM3-211ENST00000368531 LINC00470Q9BZP3 86 aa12.25□□□□□ -0.45
TPM3-211ENST00000368531 GABARAPL1Q9H0R8 117 aa12.25□□□□□ -0.45
TPM3-211ENST00000368531 CRLF2Q9HC73 371 aa12.25□□□□□ -0.45
TPM3-211ENST00000368531 GPR35Q9HC97 309 aa12.25□□□□□ -0.45
TPM3-211ENST00000368531 B3GAT2Q9NPZ5 323 aa12.25□□□□□ -0.45
TPM3-211ENST00000368531 NPDC1Q9NQX5 325 aaPredicted RBP12.25□□□□□ -0.45
TPM3-211ENST00000368531 GLTPQ9NZD2 209 aa12.25□□□□□ -0.45
TPM3-211ENST00000368531 POFUT2Q9Y2G5 429 aa12.25□□□□□ -0.45
TPM3-211ENST00000368531 A6NIZ1 184 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 NPIPB13A6NJU9 1138 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 OR6C65A6NJZ3 312 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 NPIPB4C9JG80 1138 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 C16orf97H3BN30 126 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 IMPA2O14732 288 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 RAD51DO75771 328 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 SEC14L2O76054 403 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 ITGA5P08648 1049 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 QDPRP09417 244 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 IL32P24001 234 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 IGFBP5P24593 272 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 SDHAP31040 664 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 UGT2B10P36537 528 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 RAP1BP61224 184 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 RAP1AP62834 184 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 FMODQ06828 376 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 ITGADQ13349 1161 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 DAG1Q14118 895 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 GINS1Q14691 196 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 CEACAM16Q2WEN9 425 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 MESTQ5EB52 335 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 SFRP5Q5T4F7 317 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 TMEM236Q5W0B7 351 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 LPCAT4Q643R3 524 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 KDM4DQ6B0I6 523 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 ALKBH2Q6NS38 261 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 STAC2Q6ZMT1 411 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 ZBTB49Q6ZSB9 765 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 BHLHA15Q7RTS1 189 aaPredicted RBP12.24□□□□□ -0.45
TPM3-211ENST00000368531 ABHD12BQ7Z5M8 362 aaPredicted RBP12.24□□□□□ -0.45
TPM3-211ENST00000368531 NOXO1Q8NFA2 376 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 OR52E2Q8NGJ4 325 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 NSMAFQ92636 917 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 KISS1RQ969F8 398 aaPredicted RBP12.24□□□□□ -0.45
TPM3-211ENST00000368531 RBM4BQ9BQ04 359 aaKnown RBP12.24□□□□□ -0.45
TPM3-211ENST00000368531 C9orf16Q9BUW7 83 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 RBM4Q9BWF3 364 aaKnown RBP12.24□□□□□ -0.45
TPM3-211ENST00000368531 RERGLQ9H628 205 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 DCLRE1BQ9H816 532 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 STX18Q9P2W9 335 aaKnown RBP12.24□□□□□ -0.45
TPM3-211ENST00000368531 NKX1-2Q9UD57 310 aaPredicted RBP12.24□□□□□ -0.45
TPM3-211ENST00000368531 MALT1Q9UDY8 824 aa12.24□□□□□ -0.45
TPM3-211ENST00000368531 FOXD3Q9UJU5 478 aaPredicted RBP12.24□□□□□ -0.45
TPM3-211ENST00000368531 RELNP78509 3460 aa12.23□□□□□ -0.45
TPM3-211ENST00000368531 BHLHE40O14503 412 aa12.23□□□□□ -0.45
TPM3-211ENST00000368531 CNOT4O95628 575 aaKnown RBP12.23□□□□□ -0.45
TPM3-211ENST00000368531 HIST1H1CP16403 213 aaKnown RBP12.23□□□□□ -0.45
TPM3-211ENST00000368531 COL8A1P27658 744 aa12.23□□□□□ -0.45
TPM3-211ENST00000368531 MPGP29372 298 aa12.23□□□□□ -0.45
TPM3-211ENST00000368531 CDKN2AP42771 156 aaKnown RBP12.23□□□□□ -0.45
TPM3-211ENST00000368531 CRISP1P54107 249 aa12.23□□□□□ -0.45
TPM3-211ENST00000368531 ARF1P84077 181 aaKnown RBP12.23□□□□□ -0.45
TPM3-211ENST00000368531 PPP2R2BQ00005 443 aa12.23□□□□□ -0.45
TPM3-211ENST00000368531 DBPQ10586 325 aaPredicted RBP12.23□□□□□ -0.45
TPM3-211ENST00000368531 P2RY6Q15077 328 aa12.23□□□□□ -0.45
TPM3-211ENST00000368531 TRIP10Q15642 601 aa12.23□□□□□ -0.45
TPM3-211ENST00000368531 ZIK1Q3SY52 487 aaPredicted RBP12.23□□□□□ -0.45
TPM3-211ENST00000368531 FAM205BPQ63HN1 556 aa12.23□□□□□ -0.45
TPM3-211ENST00000368531 LRFN4Q6PJG9 635 aa12.23□□□□□ -0.45
TPM3-211ENST00000368531 PTCHD4Q6ZW05 846 aa12.23□□□□□ -0.45
TPM3-211ENST00000368531 JAZF1Q86VZ6 243 aa12.23□□□□□ -0.45
TPM3-211ENST00000368531 ZNF433Q8N7K0 673 aaPredicted RBP12.23□□□□□ -0.45
TPM3-211ENST00000368531 OR2T33Q8NG76 320 aa12.23□□□□□ -0.45
TPM3-211ENST00000368531 LINC01560Q8TB33 94 aa12.23□□□□□ -0.45
TPM3-211ENST00000368531 DNAJC9Q8WXX5 260 aa12.23□□□□□ -0.45
TPM3-211ENST00000368531 MCHR2Q969V1 340 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms