RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 ZNF584Q8IVC4 421 aa13.77□□□□□ -0.21
CKS1B-202ENST00000368436 SKA3Q8IX90 412 aa13.77□□□□□ -0.21
CKS1B-202ENST00000368436 RFLNBQ8N5W9 214 aa13.77□□□□□ -0.21
CKS1B-202ENST00000368436 SMYD1Q8NB12 490 aa13.77□□□□□ -0.21
CKS1B-202ENST00000368436 OR6X1Q8NH79 312 aa13.77□□□□□ -0.21
CKS1B-202ENST00000368436 TAS2R5Q9NYW4 299 aa13.77□□□□□ -0.21
CKS1B-202ENST00000368436 M0QX08 132 aa13.76□□□□□ -0.21
CKS1B-202ENST00000368436 M0R3H8 397 aa13.76□□□□□ -0.21
CKS1B-202ENST00000368436 LYPD3O95274 346 aa13.76□□□□□ -0.21
CKS1B-202ENST00000368436 RAB36O95755 333 aa13.76□□□□□ -0.21
CKS1B-202ENST00000368436 THY1P04216 161 aa13.76□□□□□ -0.21
CKS1B-202ENST00000368436 ADORA3P0DMS8 318 aa13.76□□□□□ -0.21
CKS1B-202ENST00000368436 DVL1P1P54792 670 aaPredicted RBP13.76□□□□□ -0.21
CKS1B-202ENST00000368436 RPS23P62266 143 aaKnown RBP13.76□□□□□ -0.21
CKS1B-202ENST00000368436 RBBP4Q09028 425 aa13.76□□□□□ -0.21
CKS1B-202ENST00000368436 RAB39AQ14964 217 aa13.76□□□□□ -0.21
CKS1B-202ENST00000368436 ZNF74Q16587 644 aa13.76□□□□□ -0.21
CKS1B-202ENST00000368436 ENTPD8Q5MY95 495 aa13.76□□□□□ -0.21
CKS1B-202ENST00000368436 LRP11Q86VZ4 500 aa13.76□□□□□ -0.21
CKS1B-202ENST00000368436 C11orf65Q8NCR3 313 aa13.76□□□□□ -0.21
CKS1B-202ENST00000368436 GPR32P1Q8NGA4 272 aa13.76□□□□□ -0.21
CKS1B-202ENST00000368436 OR6T1Q8NGN1 323 aa13.76□□□□□ -0.21
CKS1B-202ENST00000368436 FGFBP3Q8TAT2 258 aa13.76□□□□□ -0.21
CKS1B-202ENST00000368436 SYT3Q9BQG1 590 aa13.76□□□□□ -0.21
CKS1B-202ENST00000368436 RACGAP1Q9H0H5 632 aa13.76□□□□□ -0.21
CKS1B-202ENST00000368436 GLTPQ9NZD2 209 aa13.76□□□□□ -0.21
CKS1B-202ENST00000368436 SLC7A8Q9UHI5 535 aa13.76□□□□□ -0.21
CKS1B-202ENST00000368436 C11orf98E9PRG8 122 aa13.75□□□□□ -0.21
CKS1B-202ENST00000368436 SERPINI2O75830 405 aa13.75□□□□□ -0.21
CKS1B-202ENST00000368436 OR6A2O95222 327 aa13.75□□□□□ -0.21
CKS1B-202ENST00000368436 HPXP02790 462 aa13.75□□□□□ -0.21
CKS1B-202ENST00000368436 SERPINA5P05154 406 aa13.75□□□□□ -0.21
CKS1B-202ENST00000368436 PATE4P0C8F1 98 aa13.75□□□□□ -0.21
CKS1B-202ENST00000368436 COL8A2P25067 703 aa13.75□□□□□ -0.21
CKS1B-202ENST00000368436 ALDH3B1P43353 468 aa13.75□□□□□ -0.21
CKS1B-202ENST00000368436 SEC24CP53992 1094 aa13.75□□□□□ -0.21
CKS1B-202ENST00000368436 GALK2Q01415 458 aa13.75□□□□□ -0.21
CKS1B-202ENST00000368436 GKAP1Q5VSY0 366 aaPredicted RBP13.75□□□□□ -0.21
CKS1B-202ENST00000368436 REP15Q6BDI9 236 aa13.75□□□□□ -0.21
CKS1B-202ENST00000368436 LRFN4Q6PJG9 635 aa13.75□□□□□ -0.21
CKS1B-202ENST00000368436 SLC35D2Q76EJ3 337 aa13.75□□□□□ -0.21
CKS1B-202ENST00000368436 SLC22A24Q8N4F4 322 aa13.75□□□□□ -0.21
CKS1B-202ENST00000368436 DPP10Q8N608 796 aa13.75□□□□□ -0.21
CKS1B-202ENST00000368436 OR4D11Q8NGI4 311 aa13.75□□□□□ -0.21
CKS1B-202ENST00000368436 STON2Q8WXE9 905 aa13.75□□□□□ -0.21
CKS1B-202ENST00000368436 RDH5Q92781 318 aa13.75□□□□□ -0.21
CKS1B-202ENST00000368436 RABEP2Q9H5N1 569 aa13.75□□□□□ -0.21
CKS1B-202ENST00000368436 MYEF2Q9P2K5 600 aaKnown RBP13.75□□□□□ -0.21
CKS1B-202ENST00000368436 LEF1Q9UJU2 399 aaPredicted RBP13.75□□□□□ -0.21
CKS1B-202ENST00000368436 ANK2Q01484 3957 aa13.75□□□□□ -0.21
CKS1B-202ENST00000368436 CPSF4LA6NMK7 179 aaKnown RBP13.74□□□□□ -0.21
CKS1B-202ENST00000368436 B4DSR2 109 aa13.74□□□□□ -0.21
CKS1B-202ENST00000368436 TCF21O43680 179 aa13.74□□□□□ -0.21
CKS1B-202ENST00000368436 CH25HO95992 272 aa13.74□□□□□ -0.21
CKS1B-202ENST00000368436 OPN1SWP03999 348 aa13.74□□□□□ -0.21
CKS1B-202ENST00000368436 TCN1P20061 433 aaPredicted RBP13.74□□□□□ -0.21
CKS1B-202ENST00000368436 ACHEP22303 614 aa13.74□□□□□ -0.21
CKS1B-202ENST00000368436 MRPS11P82912 194 aaKnown RBP13.74□□□□□ -0.21
CKS1B-202ENST00000368436 CCNIQ14094 377 aa13.74□□□□□ -0.21
CKS1B-202ENST00000368436 SELPLGQ14242 412 aa13.74□□□□□ -0.21
CKS1B-202ENST00000368436 MAD2L1BPQ15013 274 aaPredicted RBP13.74□□□□□ -0.21
CKS1B-202ENST00000368436 TTC33Q6PID6 262 aaPredicted RBP13.74□□□□□ -0.21
CKS1B-202ENST00000368436 DHDDSQ86SQ9 333 aa13.74□□□□□ -0.21
CKS1B-202ENST00000368436 TSPYL5Q86VY4 417 aaPredicted RBP13.74□□□□□ -0.21
CKS1B-202ENST00000368436 CARM1Q86X55 608 aa13.74□□□□□ -0.21
CKS1B-202ENST00000368436 RBM45Q8IUH3 476 aaKnown RBP13.74□□□□□ -0.21
CKS1B-202ENST00000368436 LRRC17Q8N6Y2 441 aa13.74□□□□□ -0.21
CKS1B-202ENST00000368436 ADAMTS16Q8TE57 1224 aa13.74□□□□□ -0.21
CKS1B-202ENST00000368436 ZNF566Q969W8 418 aa13.74□□□□□ -0.21
CKS1B-202ENST00000368436 SLC25A44Q96H78 314 aaPredicted RBP13.74□□□□□ -0.21
CKS1B-202ENST00000368436 CGREF1Q99674 301 aa13.74□□□□□ -0.21
CKS1B-202ENST00000368436 ZNF426Q9BUY5 554 aa13.74□□□□□ -0.21
CKS1B-202ENST00000368436 ZNF385DQ9H6B1 395 aa13.74□□□□□ -0.21
CKS1B-202ENST00000368436 TMEM38BQ9NVV0 291 aa13.74□□□□□ -0.21
CKS1B-202ENST00000368436 NDUFAF1Q9Y375 327 aa13.74□□□□□ -0.21
CKS1B-202ENST00000368436 TRAPPC13A5PLN9 417 aa13.73□□□□□ -0.21
CKS1B-202ENST00000368436 ENTPD5O75356 428 aa13.73□□□□□ -0.21
CKS1B-202ENST00000368436 ASAH2BP0C7U1 165 aa13.73□□□□□ -0.21
CKS1B-202ENST00000368436 PGA4P0DJD7 388 aa13.73□□□□□ -0.21
CKS1B-202ENST00000368436 PGA3P0DJD8 388 aa13.73□□□□□ -0.21
CKS1B-202ENST00000368436 OR8G3PP0DMU2 310 aa13.73□□□□□ -0.21
CKS1B-202ENST00000368436 CD247P20963 164 aa13.73□□□□□ -0.21
CKS1B-202ENST00000368436 PCMT1P22061 227 aa13.73□□□□□ -0.21
CKS1B-202ENST00000368436 LSP1P33241 339 aa13.73□□□□□ -0.21
CKS1B-202ENST00000368436 SRP14P37108 136 aaKnown RBP13.73□□□□□ -0.21
CKS1B-202ENST00000368436 GPR6P46095 362 aaPredicted RBP13.73□□□□□ -0.21
CKS1B-202ENST00000368436 TMEM33P57088 247 aa13.73□□□□□ -0.21
CKS1B-202ENST00000368436 MTPNP58546 118 aa13.73□□□□□ -0.21
CKS1B-202ENST00000368436 HIST3H3Q16695 136 aa13.73□□□□□ -0.21
CKS1B-202ENST00000368436 CYP51A1Q16850 503 aa13.73□□□□□ -0.21
CKS1B-202ENST00000368436 DEF8Q6ZN54 512 aa13.73□□□□□ -0.21
CKS1B-202ENST00000368436 PATL1Q86TB9 770 aaKnown RBP13.73□□□□□ -0.21
CKS1B-202ENST00000368436 RETREG3Q86VR2 466 aa13.73□□□□□ -0.21
CKS1B-202ENST00000368436 SLC30A8Q8IWU4 369 aa13.73□□□□□ -0.21
CKS1B-202ENST00000368436 CLDND2Q8NHS1 167 aa13.73□□□□□ -0.21
CKS1B-202ENST00000368436 YIPF5Q969M3 257 aa13.73□□□□□ -0.21
CKS1B-202ENST00000368436 MPP4Q96JB8 637 aa13.73□□□□□ -0.21
CKS1B-202ENST00000368436 SLC19A3Q9BZV2 496 aa13.73□□□□□ -0.21
CKS1B-202ENST00000368436 PCDHAC1Q9H158 963 aa13.73□□□□□ -0.21
CKS1B-202ENST00000368436 KAT8Q9H7Z6 458 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms