RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 HCSTQ9UBK5 93 aa14.49□□□□□ -0.09
NUCKS1-201ENST00000367142 A6NIN4 97 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 M0R1B8 84 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 NCR1O76036 304 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 FOLR1P15328 257 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 OPRL1P41146 370 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 ZNF626Q68DY1 528 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 WFDC8Q8IUA0 241 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 MS4A4AQ96JQ5 239 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 A0A1B0GWA3 101 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 GLAP06280 429 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 BEX5Q5H9J7 111 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 FAM26DQ5JW98 314 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 GRINAQ7Z429 371 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 FN3KRPQ9HA64 309 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 LTN1O94822 1766 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 TSTD3H0UI37 97 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 LGALS8O00214 317 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 TNFRSF10CO14798 259 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 SGCEO43556 437 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 GIPRP48546 466 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 TBCEQ15813 527 aaPredicted RBP14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 GIMAP1Q8WWP7 306 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 LRFN5Q96NI6 719 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 A4GALTQ9NPC4 353 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 FIGNL2A6NMB9 653 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 GJB3O75712 270 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 F11P03951 625 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 ARR3P36575 388 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 PPT1P50897 306 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 PPIAP62937 165 aaKnown RBP14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 ZNF91Q05481 1191 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 ALKBH1Q13686 389 aaKnown RBP14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 DEFB109BQ30KR1 87 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 YIF1BQ5BJH7 314 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 AMIGO3Q86WK7 504 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 OR5AS1Q8N127 324 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 OR10J5Q8NHC4 309 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 SORT1Q99523 831 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 TEX51A0A1B0GUA7 166 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 SCGB1D1O95968 90 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 GASTP01350 101 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 RAP2BP61225 183 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 HMGN3Q15651 99 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 SLC35D3Q5M8T2 416 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 NXNL2Q5VZ03 156 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 FAM213BQ8TBF2 198 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 SPPL3Q8TCT6 385 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 UBE2ZQ9H832 354 aaPredicted RBP14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 LYRM4Q9HD34 91 aa14.48□□□□□ -0.09
NUCKS1-201ENST00000367142 MKRN2OSH3BPM6 223 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 CR2P20023 1033 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 MAP2K6P52564 334 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 ZNF468Q5VIY5 522 aaPredicted RBP14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 Q6ZRG5 221 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 SLC38A5Q8WUX1 472 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 FGGYQ96C11 551 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 TCEAL7Q9BRU2 100 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 ETV7Q9Y603 341 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 OR6C76A6NM76 312 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 PRKACAP17612 351 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 ZNF266Q14584 549 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 HENMT1Q5T8I9 393 aaKnown RBP14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 SLC48A1Q6P1K1 146 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 SIRT6Q8N6T7 355 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 DCLRE1CQ96SD1 692 aaKnown RBP14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 MED18Q9BUE0 208 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 MENTQ9BUN1 341 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 GALNT9Q9HCQ5 603 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 RAB22AQ9UL26 194 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 YIF1AO95070 293 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 MAKP20794 623 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 TRHRP34981 398 aaPredicted RBP14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 TMEM41BQ5BJD5 291 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 SLCO4C1Q6ZQN7 724 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 EGLN2Q96KS0 407 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 SMIM14Q96QK8 99 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 SLC6A17Q9H1V8 727 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 ZNF142P52746 1687 aaPredicted RBP14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 RPS10-NUDT3A0A1W2PQS6 291 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 CD1CP29017 333 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 EIF2DP41214 584 aaKnown RBP14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 RPS10P46783 165 aaKnown RBP14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 ELAVL1Q15717 326 aaKnown RBP14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 ZNF836Q6ZNA1 936 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 ADGRE4PQ86SQ3 457 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 A0A0B4J2A0 478 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 SLC5A10A0PJK1 596 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 EFSO43281 561 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 NUDT7P0C024 238 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 BCL6P41182 706 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 FOXK2Q01167 660 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 SMAD4Q13485 552 aaKnown RBP14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 LYPD4Q6UWN0 246 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 UTP4Q969X6 686 aaKnown RBP14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 TMEM106AQ96A25 262 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 TM4SF18Q96CE8 201 aa14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 ELF4Q99607 663 aaPredicted RBP14.47□□□□□ -0.09
NUCKS1-201ENST00000367142 ADAM19Q9H013 955 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms