RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 F12P00748 615 aaPredicted RBP10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 PTGER4P35408 488 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 C1orf61Q13536 156 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 YOD1Q5VVQ6 348 aaPredicted RBP10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 RYDENQ9NUL5 291 aaKnown RBP10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 ENPP4Q9Y6X5 453 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 TCRBV21S2A2A0A5A6 115 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 OPN1LWP04000 364 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 PRDX3P30048 256 aaKnown RBP10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 TCEAL1Q15170 157 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 TMEM201Q5SNT2 666 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 FAM219BQ5XKK7 198 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 TMEM182Q6ZP80 229 aaPredicted RBP10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 MED19A0JLT2 244 aaPredicted RBP10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 SLC16A5O15375 505 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 SIAH2O43255 324 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 C6orf132Q5T0Z8 1188 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 PRAMEF8Q5VWM4 474 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 PRAMEF7Q5VXH5 474 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 TMEM104Q8NE00 496 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 DMAC2Q9NW81 257 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 CTSFQ9UBX1 484 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 CHRNA9Q9UGM1 479 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 GABRR3A8MPY1 467 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 OR10A3P58181 314 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 MANEAQ5SRI9 462 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 RBMS3Q6XE24 437 aaKnown RBP10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 MACROD1Q9BQ69 325 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 CUTCQ9NTM9 273 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 GBF1Q92538 1859 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 TNRC6AQ8NDV7 1962 aaKnown RBP10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 ANKRD30BLA7E2S9 258 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 P2RX6O15547 441 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 PCSK2P16519 638 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 ZNF28P17035 718 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 B2MP61769 119 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 DACT2Q5SW24 774 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 ABHD17BQ5VST6 288 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 ADIPOR2Q86V24 386 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 STT3BQ8TCJ2 826 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 DPH1Q9BZG8 443 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 SNX11Q9Y5W9 270 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 RPL7P18124 248 aaKnown RBP10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 RAB7AP51149 207 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 AUNIPQ9H7T9 357 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 CASP8AP2Q9UKL3 1982 aa10.29□□□□□ -0.76
CDC42BPA-205ENST00000366769 A0A1W2PNV4 684 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 C2orf78A6NCI8 922 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 NDUFS6O75380 124 aaKnown RBP10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 MTHFD2P13995 350 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 UBE2G2P60604 165 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 BPIFB2Q8N4F0 458 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 SFXN5Q8TD22 340 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 DDIT4LQ96D03 193 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 DDA1Q9BW61 102 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 OPN3Q9H1Y3 402 aaPredicted RBP10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 UBIAD1Q9Y5Z9 338 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 MRC1P22897 1456 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 SLC22A23A1A5C7 686 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 GJE1A6NN92 205 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 HES1Q14469 280 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 ZNF385CQ66K41 422 aaPredicted RBP10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 PPP1R35Q8TAP8 253 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 GPR20Q99678 358 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 ROS1P08922 2347 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 LRP3O75074 770 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 KDELR2P33947 212 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 SMAD2Q15796 467 aaKnown RBP10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 RNLSQ5VYX0 342 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 VRK3Q8IV63 474 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 OR6K3Q8NGY3 331 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 HCRTO43612 131 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 PRSS56P0CW18 603 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 DUSP28Q4G0W2 176 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 DMBX1Q8NFW5 382 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 PTP4A1Q93096 173 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 NPIPA5A0A0B4J1W7 369 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 PPP6CO00743 305 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 CIDEAO60543 219 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 PMP2P02689 132 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 GYPBP06028 91 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 ASPGQ86U10 573 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 LRRTM3Q86VH5 581 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 NAGSQ8N159 534 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 DAZLQ92904 295 aaKnown RBP10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 TMEM18Q96B42 140 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 CDKN2AIPNLQ96HQ2 116 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 A0A1W2PP55 124 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 J3QR89 54 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 ACP2P11117 423 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 ITGB5P18084 799 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 OR5M1Q8NGP8 315 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 GSK3AP49840 483 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 CXADRP78310 365 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 KDM4DQ6B0I6 523 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 THNSL2Q86YJ6 484 aa10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 RGP1Q92546 391 aaPredicted RBP10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 SLIRPQ9GZT3 109 aaKnown RBP10.28□□□□□ -0.76
CDC42BPA-205ENST00000366769 ARV1Q9H2C2 271 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms