RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 A0A1W2PQL4 384 aaPredicted RBP-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 hCG_1807616A0A1W2PRN6 198 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 DDX39AO00148 427 aaKnown RBP-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 CHMP2AO43633 222 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 PRKYO43930 277 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 GMNNO75496 209 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 STX11O75558 287 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 HBQ1P09105 142 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 OR8U9P0C7N5 309 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 C8orf89P0DMQ9 161 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 CLUP10909 449 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 PAICSP22234 425 aaKnown RBP-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 CD1CP29017 333 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 AQP2P41181 271 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 PRKXP51817 358 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 MRPS6P82932 125 aaKnown RBP-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 RGS1Q08116 209 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 RIPPLY1Q0D2K3 151 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 MAB21L1Q13394 359 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 BTN1A1Q13410 526 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 FZD2Q14332 565 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 CASP8Q14790 479 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 KLHL12Q53G59 568 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 SAMD4BQ5PRF9 694 aaKnown RBP-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 NKAIN2Q5VXU1 208 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 SLC25A25Q6KCM7 469 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 FAHD2BQ6P2I3 314 aaPredicted RBP-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 DEGS2Q6QHC5 323 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 MMS22LQ6ZRQ5 1243 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 C1orf186Q6ZWK4 172 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 ERN2Q76MJ5 926 aaKnown RBP-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 OLIG3Q7RTU3 272 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 GOLGA7Q7Z5G4 137 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 MOB3BQ86TA1 216 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 SLC26A11Q86WA9 606 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 TMEM126BQ8IUX1 230 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 AQP12AQ8IXF9 295 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 CCAR2Q8N163 923 aaKnown RBP-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 NUP93Q8N1F7 819 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 C15orf54Q8N8G6 183 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 LFNGQ8NES3 379 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 VN1R2Q8NFZ6 395 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 OCC1Q8TAD7 63 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 MRPS31Q92665 395 aaKnown RBP-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 P3H4Q92791 437 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 YIPF5Q969M3 257 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 FAHD2AQ96GK7 314 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 SEC22AQ96IW7 307 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 SLC19A3Q9BZV2 496 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 POLR3FQ9H1D9 316 aaPredicted RBP-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 ST6GALNAC4Q9H4F1 302 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 SMYD3Q9H7B4 428 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 AKIRIN1Q9H9L7 192 aaPredicted RBP-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 TMEM161AQ9NX61 479 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 XCL2Q9UBD3 114 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 MTRRQ9UBK8 725 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 MORF4L1Q9UBU8 362 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 CYTH4Q9UIA0 394 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 SLC7A11Q9UPY5 501 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 PSG8Q9UQ74 426 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 MRPS16Q9Y3D3 137 aaKnown RBP-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 COMMD10Q9Y6G5 202 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 FAM169AQ9Y6X4 670 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 SONP18583 2426 aaKnown RBP-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 PIEZO1Q92508 2521 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 WDR62O43379 1518 aa-0.74□□□□□ -2.53
RNU6-54P-201ENST00000365563 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.75□□□□□ -2.53
RNU6-54P-201ENST00000365563 ZNF462Q96JM2 2506 aa-0.75□□□□□ -2.53
RNU6-54P-201ENST00000365563 MPDZO75970 2070 aa-0.75□□□□□ -2.53
RNU6-54P-201ENST00000365563 IGKV1D-8A0A087WSZ0 117 aa-0.75□□□□□ -2.53
RNU6-54P-201ENST00000365563 HTR3EA5X5Y0 456 aa-0.75□□□□□ -2.53
RNU6-54P-201ENST00000365563 GGTLC3B5MD39 225 aa-0.75□□□□□ -2.53
RNU6-54P-201ENST00000365563 H3BMQ9 156 aa-0.75□□□□□ -2.53
RNU6-54P-201ENST00000365563 ALOX15BO15296 676 aa-0.75□□□□□ -2.53
RNU6-54P-201ENST00000365563 ADAM20O43506 726 aa-0.75□□□□□ -2.53
RNU6-54P-201ENST00000365563 PLIN3O60664 434 aa-0.75□□□□□ -2.53
RNU6-54P-201ENST00000365563 EIF1BO60739 113 aaKnown RBP-0.75□□□□□ -2.53
RNU6-54P-201ENST00000365563 BEST1O76090 585 aa-0.75□□□□□ -2.53
RNU6-54P-201ENST00000365563 MFN2O95140 757 aa-0.75□□□□□ -2.53
RNU6-54P-201ENST00000365563 SIX3O95343 332 aaPredicted RBP-0.75□□□□□ -2.53
RNU6-54P-201ENST00000365563 PAHP00439 452 aa-0.75□□□□□ -2.53
RNU6-54P-201ENST00000365563 IGHV3-11P01762 117 aa-0.75□□□□□ -2.53
RNU6-54P-201ENST00000365563 IGHG2P01859 326 aa-0.75□□□□□ -2.53
RNU6-54P-201ENST00000365563 IGHG4P01861 327 aa-0.75□□□□□ -2.53
RNU6-54P-201ENST00000365563 IGHMP01871 453 aa-0.75□□□□□ -2.53
RNU6-54P-201ENST00000365563 C1QCP02747 245 aa-0.75□□□□□ -2.53
RNU6-54P-201ENST00000365563 CT62P0C5K7 136 aa-0.75□□□□□ -2.53
RNU6-54P-201ENST00000365563 SCG2P13521 617 aa-0.75□□□□□ -2.53
RNU6-54P-201ENST00000365563 SSTR5P35346 364 aa-0.75□□□□□ -2.53
RNU6-54P-201ENST00000365563 ACTN2P35609 894 aa-0.75□□□□□ -2.53
RNU6-54P-201ENST00000365563 NNMTP40261 264 aa-0.75□□□□□ -2.53
RNU6-54P-201ENST00000365563 LEPP41159 167 aa-0.75□□□□□ -2.53
RNU6-54P-201ENST00000365563 EIF1P41567 113 aaKnown RBP-0.75□□□□□ -2.53
RNU6-54P-201ENST00000365563 CDKN2BP42772 138 aa-0.75□□□□□ -2.53
RNU6-54P-201ENST00000365563 MAGEA4P43358 317 aa-0.75□□□□□ -2.53
RNU6-54P-201ENST00000365563 CCNG1P51959 295 aa-0.75□□□□□ -2.53
RNU6-54P-201ENST00000365563 CCNA1P78396 465 aa-0.75□□□□□ -2.53
RNU6-54P-201ENST00000365563 HOXC5Q00444 222 aa-0.75□□□□□ -2.53
RNU6-54P-201ENST00000365563 TFCP2Q12800 502 aa-0.75□□□□□ -2.53
RNU6-54P-201ENST00000365563 G3BP1Q13283 466 aaKnown RBP eCLIP-0.75□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms