RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 SCAMP4Q969E2 229 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 CLMPQ9H6B4 373 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 RAB22AQ9UL26 194 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 CBLCQ9ULV8 474 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 SOX18P35713 384 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 FIGLAQ6QHK4 219 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 CPXM2Q8N436 756 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 GPR150Q8NGU9 434 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 EPHA5P54756 1037 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 KRTDAPP60985 99 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 TSPAN31Q12999 210 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 MAST2Q6P0Q8 1798 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 TOR2AQ5JU69 321 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 LETMD1Q6P1Q0 360 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 OR2L13Q8N349 312 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 OR13D1Q8NGV5 346 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 SEC22AQ96IW7 307 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 ALOXE3Q9BYJ1 711 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 SDK1Q7Z5N4 2213 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 TRAV20A0A0B4J274 112 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 ADRA2CP18825 462 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 WNT7BP56706 349 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 OR2B8PP59922 312 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 OR1Q1Q15612 314 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 LINC00299Q6ZSB3 139 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 CDH26Q8IXH8 852 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 OR13C8Q8NGS7 320 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 A0A1B0GVG6 124 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 A0A1W2PP55 124 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 K7ERQ8 282 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 SHARPINQ9H0F6 387 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 NDRG3Q9UGV2 375 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 CSAG2Q9Y5P2 127 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 FAM183AA6NL82 134 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 ALX3O95076 343 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 BLVRBP30043 206 aaPredicted RBP8.63□□□□□ -1.03
VPS13A-203ENST00000360280 LMAN2Q12907 356 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 RAB6CQ53S08 254 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 SIAH3Q8IW03 269 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 XYLT2Q9H1B5 865 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 G3V2L1 256 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 SLC25A46Q96AG3 418 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 FAM234AQ9H0X4 552 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 LAMP3Q9UQV4 416 aa8.63□□□□□ -1.03
VPS13A-203ENST00000360280 OR6C76A6NM76 312 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 ARNTP27540 789 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 HIST1H3AP68431 136 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 CST6Q15828 149 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 SYT6Q5T7P8 510 aaPredicted RBP8.62□□□□□ -1.03
VPS13A-203ENST00000360280 APIPQ96GX9 242 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 PIGQQ9BRB3 760 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 SFXN1Q9H9B4 322 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 ACSS1Q9NUB1 689 aaPredicted RBP8.62□□□□□ -1.03
VPS13A-203ENST00000360280 MRC1P22897 1456 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 ANTXRLA6NF34 631 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 ICAM2P13598 275 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 GDF1P27539 372 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 C17orf107Q6ZR85 190 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 ST8SIA4Q92187 359 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 NTMT1Q9BV86 223 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 BOKQ9UMX3 212 aaPredicted RBP8.62□□□□□ -1.03
VPS13A-203ENST00000360280 E5RGE8 158 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 DCAF7P61962 342 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 PODNL1Q6PEZ8 512 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 SMIM7Q9BQ49 75 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 GPR62Q9BZJ7 368 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 WWTR1Q9GZV5 400 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 RAB6CQ9H0N0 254 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 SMG9Q9H0W8 520 aaKnown RBP8.62□□□□□ -1.03
VPS13A-203ENST00000360280 NPIPB15A6NHN6 443 aaPredicted RBP8.62□□□□□ -1.03
VPS13A-203ENST00000360280 ADAM11O75078 769 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 ACSM4P0C7M7 580 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 ELLP55199 621 aaPredicted RBP8.62□□□□□ -1.03
VPS13A-203ENST00000360280 MRPL2Q5T653 305 aaKnown RBP8.62□□□□□ -1.03
VPS13A-203ENST00000360280 ACOT7LQ6ZUV0 252 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 ACOT4Q8N9L9 421 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 MED18Q9BUE0 208 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 TMEM184BQ9Y519 407 aaPredicted RBP8.62□□□□□ -1.03
VPS13A-203ENST00000360280 KIAA1217Q5T5P2 1943 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 SULT1A2P50226 295 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 CPEB3Q8NE35 698 aaKnown RBP8.62□□□□□ -1.03
VPS13A-203ENST00000360280 TSACCQ96A04 125 aaPredicted RBP8.62□□□□□ -1.03
VPS13A-203ENST00000360280 IGSF5Q9NSI5 407 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 EMC9Q9Y3B6 208 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 TUBAL3A6NHL2 446 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 I6L893 689 aaPredicted RBP8.62□□□□□ -1.03
VPS13A-203ENST00000360280 ST8SIA3O43173 380 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 ZNF217O75362 1048 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 PMP2P02689 132 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 MTHFD2P13995 350 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 FAM189BP81408 668 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 OR2T2Q6IF00 324 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 TMEM184AQ6ZMB5 413 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 SLC29A1Q99808 456 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 CCR6P51684 374 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 NLRC3Q7RTR2 1065 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 DEFB119Q8N690 84 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 ZNF321PQ8N8H1 164 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 SLC17A9Q9BYT1 436 aa8.62□□□□□ -1.03
VPS13A-203ENST00000360280 HES1Q14469 280 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms