RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 ZNF534Q76KX8 674 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 OR6V1Q8N148 313 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 PHOSPHO2Q8TCD6 241 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 ZNF816-ZNF321PA0A0X1KG74 233 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 RFXAPO00287 272 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 HBE1P02100 147 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 TACR1P25103 407 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 OR1D5P58170 312 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 LPCAT3Q6P1A2 487 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 DPPA2Q7Z7J5 298 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 OR5AS1Q8N127 324 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 ZNF321PQ8N8H1 164 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 A4GALTQ9NPC4 353 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 PSORS1C1Q9UIG5 152 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 SNX11Q9Y5W9 270 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 DNAJC25-GNG10A0A024R161 153 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 ZNF93P35789 620 aaPredicted RBP16.96■□□□□ 0.31
SHANK1-202ENST00000359082 MTNR1BP49286 362 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 UBE2G2P60604 165 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 PMPCAQ10713 525 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 TMEM41BQ5BJD5 291 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 ZNF813Q6ZN06 617 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 DCXRQ7Z4W1 244 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 GCNT2Q8N0V5 402 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 OR5H6Q8NGV6 325 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 GINS3Q9BRX5 216 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 CSNK1G1Q9HCP0 422 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 SSUH2Q9Y2M2 353 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 hCG_1809904A0A1W2PP81 198 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 A0A1W2PPE2 198 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 A0A1W2PR64 198 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 A0A1W2PRV1 198 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 EFSO43281 561 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 RRADP55042 308 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 YPEL5P62699 121 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 DPY19L2P2Q6ZN68 376 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 ZNF454Q8N9F8 522 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 PXT1Q8NFP0 134 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 C20orf27Q9GZN8 174 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 PLK3Q9H4B4 646 aa16.96■□□□□ 0.31
SHANK1-202ENST00000359082 NRXN3Q9Y4C0 1643 aa16.96■□□□□ 0.3
SHANK1-202ENST00000359082 NPY4RP50391 375 aa16.96■□□□□ 0.3
SHANK1-202ENST00000359082 ADIRFQ15847 76 aa16.96■□□□□ 0.3
SHANK1-202ENST00000359082 STEAP1BQ6NZ63 245 aa16.96■□□□□ 0.3
SHANK1-202ENST00000359082 CCDC71Q8IV32 467 aaPredicted RBP16.96■□□□□ 0.3
SHANK1-202ENST00000359082 CMTM2Q8TAZ6 248 aa16.96■□□□□ 0.3
SHANK1-202ENST00000359082 SEMA6CQ9H3T2 930 aa16.96■□□□□ 0.3
SHANK1-202ENST00000359082 HCFC2Q9Y5Z7 792 aa16.96■□□□□ 0.3
SHANK1-202ENST00000359082 MYH13Q9UKX3 1938 aa16.95■□□□□ 0.3
SHANK1-202ENST00000359082 FABP7O15540 132 aa16.95■□□□□ 0.3
SHANK1-202ENST00000359082 WNT11O96014 354 aa16.95■□□□□ 0.3
SHANK1-202ENST00000359082 IL3RAP26951 378 aa16.95■□□□□ 0.3
SHANK1-202ENST00000359082 C15orf54Q8N8G6 183 aa16.95■□□□□ 0.3
SHANK1-202ENST00000359082 OR1E3Q8WZA6 343 aa16.95■□□□□ 0.3
SHANK1-202ENST00000359082 TINAGL1Q9GZM7 467 aaPredicted RBP16.95■□□□□ 0.3
SHANK1-202ENST00000359082 SPHK1Q9NYA1 384 aa16.95■□□□□ 0.3
SHANK1-202ENST00000359082 OR52A1Q9UKL2 312 aa16.95■□□□□ 0.3
SHANK1-202ENST00000359082 HTR1FP30939 366 aa16.95■□□□□ 0.3
SHANK1-202ENST00000359082 HTR4Q13639 388 aa16.95■□□□□ 0.3
SHANK1-202ENST00000359082 RHOXF1Q8NHV9 184 aa16.95■□□□□ 0.3
SHANK1-202ENST00000359082 HPSE2Q8WWQ2 592 aa16.95■□□□□ 0.3
SHANK1-202ENST00000359082 ARV1Q9H2C2 271 aa16.95■□□□□ 0.3
SHANK1-202ENST00000359082 A0A1B0GWA3 101 aa16.95■□□□□ 0.3
SHANK1-202ENST00000359082 C20orf202A1L168 122 aa16.95■□□□□ 0.3
SHANK1-202ENST00000359082 PAPLNO95428 1278 aa16.95■□□□□ 0.3
SHANK1-202ENST00000359082 IGHV3-9P01782 118 aa16.95■□□□□ 0.3
SHANK1-202ENST00000359082 BCL6P41182 706 aa16.95■□□□□ 0.3
SHANK1-202ENST00000359082 SRP9P49458 86 aaKnown RBP16.95■□□□□ 0.3
SHANK1-202ENST00000359082 GLIPR2Q9H4G4 154 aa16.95■□□□□ 0.3
SHANK1-202ENST00000359082 GAREM1Q9H706 876 aa16.95■□□□□ 0.3
SHANK1-202ENST00000359082 CNIH1O95406 144 aa16.95■□□□□ 0.3
SHANK1-202ENST00000359082 PSMB1P20618 241 aaKnown RBP16.95■□□□□ 0.3
SHANK1-202ENST00000359082 C5orf46Q6UWT4 87 aa16.95■□□□□ 0.3
SHANK1-202ENST00000359082 BHLHE23Q8NDY6 225 aa16.95■□□□□ 0.3
SHANK1-202ENST00000359082 EXOSC3Q9NQT5 275 aaKnown RBP16.95■□□□□ 0.3
SHANK1-202ENST00000359082 H0YIV9 168 aa16.95■□□□□ 0.3
SHANK1-202ENST00000359082 IGFBP1P08833 259 aaPredicted RBP16.95■□□□□ 0.3
SHANK1-202ENST00000359082 CR2P20023 1033 aa16.95■□□□□ 0.3
SHANK1-202ENST00000359082 GABRA4P48169 554 aa16.95■□□□□ 0.3
SHANK1-202ENST00000359082 SEMA3BQ13214 749 aa16.95■□□□□ 0.3
SHANK1-202ENST00000359082 HMGN3Q15651 99 aa16.95■□□□□ 0.3
SHANK1-202ENST00000359082 B3GAT1Q9P2W7 334 aa16.95■□□□□ 0.3
SHANK1-202ENST00000359082 USP3Q9Y6I4 520 aa16.95■□□□□ 0.3
SHANK1-202ENST00000359082 LOC100289279A0A1B0GTE1 492 aa16.94■□□□□ 0.3
SHANK1-202ENST00000359082 C7orf72A4D263 438 aa16.94■□□□□ 0.3
SHANK1-202ENST00000359082 CRMP1Q14194 572 aa16.94■□□□□ 0.3
SHANK1-202ENST00000359082 OR8G2PQ6IF36 304 aa16.94■□□□□ 0.3
SHANK1-202ENST00000359082 MDGA2Q7Z553 956 aa16.94■□□□□ 0.3
SHANK1-202ENST00000359082 OR4Q3Q8NH05 313 aa16.94■□□□□ 0.3
SHANK1-202ENST00000359082 FER1L6-AS2Q96M78 137 aa16.94■□□□□ 0.3
SHANK1-202ENST00000359082 NIPSNAP1Q9BPW8 284 aa16.94■□□□□ 0.3
SHANK1-202ENST00000359082 ZFP92A6NM28 416 aa16.94■□□□□ 0.3
SHANK1-202ENST00000359082 DEGS1O15121 323 aa16.94■□□□□ 0.3
SHANK1-202ENST00000359082 MEP1BQ16820 701 aa16.94■□□□□ 0.3
SHANK1-202ENST00000359082 KHDC1LQ5JSQ8 128 aa16.94■□□□□ 0.3
SHANK1-202ENST00000359082 GLYATL3Q5SZD4 288 aa16.94■□□□□ 0.3
SHANK1-202ENST00000359082 GLIPR1L1Q6UWM5 242 aa16.94■□□□□ 0.3
SHANK1-202ENST00000359082 CELF2-AS1Q8N7Q2 184 aa16.94■□□□□ 0.3
SHANK1-202ENST00000359082 ANKLE1Q8NAG6 615 aa16.94■□□□□ 0.3
SHANK1-202ENST00000359082 AMBRA1Q9C0C7 1298 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms