RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 SLC23A2Q9UGH3 650 aa13.7□□□□□ -0.22
CHD4-201ENST00000357008 PLSCR5A0PG75 271 aa13.69□□□□□ -0.22
CHD4-201ENST00000357008 MRPL33O75394 65 aaKnown RBP13.69□□□□□ -0.22
CHD4-201ENST00000357008 UTS2O95399 124 aa13.69□□□□□ -0.22
CHD4-201ENST00000357008 LGI1O95970 557 aa13.69□□□□□ -0.22
CHD4-201ENST00000357008 SBK2P0C263 348 aa13.69□□□□□ -0.22
CHD4-201ENST00000357008 CLDN17P56750 224 aa13.69□□□□□ -0.22
CHD4-201ENST00000357008 YPEL5P62699 121 aa13.69□□□□□ -0.22
CHD4-201ENST00000357008 IKZF1Q13422 519 aa13.69□□□□□ -0.22
CHD4-201ENST00000357008 GLYR1Q49A26 553 aaPredicted RBP13.69□□□□□ -0.22
CHD4-201ENST00000357008 OR4Q3Q8NH05 313 aa13.69□□□□□ -0.22
CHD4-201ENST00000357008 LCORQ96JN0 433 aaPredicted RBP13.69□□□□□ -0.22
CHD4-201ENST00000357008 SLC22A11Q9NSA0 550 aa13.69□□□□□ -0.22
CHD4-201ENST00000357008 OR14J1Q9UGF5 321 aa13.69□□□□□ -0.22
CHD4-201ENST00000357008 PRKRAO75569 313 aaKnown RBP13.69□□□□□ -0.22
CHD4-201ENST00000357008 SULT1C4O75897 302 aa13.69□□□□□ -0.22
CHD4-201ENST00000357008 SPI1P17947 270 aa13.69□□□□□ -0.22
CHD4-201ENST00000357008 TAGLN2P37802 199 aaKnown RBP13.69□□□□□ -0.22
CHD4-201ENST00000357008 ERVFC1P60507 584 aa13.69□□□□□ -0.22
CHD4-201ENST00000357008 CCDC71Q8IV32 467 aaPredicted RBP13.69□□□□□ -0.22
CHD4-201ENST00000357008 SLC46A1Q96NT5 459 aa13.69□□□□□ -0.22
CHD4-201ENST00000357008 NKX6-2Q9C056 277 aaPredicted RBP13.69□□□□□ -0.22
CHD4-201ENST00000357008 OBP2BQ9NPH6 170 aa13.69□□□□□ -0.22
CHD4-201ENST00000357008 LAP3P28838 519 aa13.69□□□□□ -0.22
CHD4-201ENST00000357008 CSNK1G2P78368 415 aa13.69□□□□□ -0.22
CHD4-201ENST00000357008 MAT1AQ00266 395 aaKnown RBP13.69□□□□□ -0.22
CHD4-201ENST00000357008 PLPP7Q8NBV4 271 aa13.69□□□□□ -0.22
CHD4-201ENST00000357008 PRR14Q9BWN1 585 aa13.69□□□□□ -0.22
CHD4-201ENST00000357008 C20orf202A1L168 122 aa13.69□□□□□ -0.22
CHD4-201ENST00000357008 RFX2P48378 723 aa13.69□□□□□ -0.22
CHD4-201ENST00000357008 SLC35A1P78382 337 aa13.69□□□□□ -0.22
CHD4-201ENST00000357008 MED25Q71SY5 747 aa13.69□□□□□ -0.22
CHD4-201ENST00000357008 SLC16A11Q8NCK7 471 aa13.69□□□□□ -0.22
CHD4-201ENST00000357008 NANPQ8TBE9 248 aa13.69□□□□□ -0.22
CHD4-201ENST00000357008 PDXPQ96GD0 296 aa13.69□□□□□ -0.22
CHD4-201ENST00000357008 ZMAT3Q9HA38 289 aaKnown RBP13.69□□□□□ -0.22
CHD4-201ENST00000357008 AIPO00170 330 aa13.69□□□□□ -0.22
CHD4-201ENST00000357008 F2RL1P55085 397 aa13.69□□□□□ -0.22
CHD4-201ENST00000357008 HNF4GQ14541 408 aa13.69□□□□□ -0.22
CHD4-201ENST00000357008 LGI3Q8N145 548 aa13.69□□□□□ -0.22
CHD4-201ENST00000357008 PRSS35Q8N3Z0 413 aa13.69□□□□□ -0.22
CHD4-201ENST00000357008 MRPL43Q8N983 215 aaKnown RBP13.69□□□□□ -0.22
CHD4-201ENST00000357008 A0A087WUU8 490 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 TMEM221A6NGB7 291 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 PHF1O43189 567 aaPredicted RBP13.68□□□□□ -0.22
CHD4-201ENST00000357008 SELENOFO60613 162 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 PTGER4P35408 488 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 TMEM64Q6YI46 380 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 ARRDC3Q96B67 414 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 PDCD1LG2Q9BQ51 273 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 ABHD6Q9BV23 337 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 ISYNA1Q9NPH2 558 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 LRIT1Q9P2V4 623 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 NUMA1Q14980 2115 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 SLC5A10A0PJK1 596 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 ZNF195O14628 629 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 OR2F2O95006 317 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 RAF1P04049 648 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 BIDP55957 195 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 C17orf67Q0P5P2 114 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 PMPCAQ10713 525 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 OR2F1Q13607 317 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 OGFOD3Q6PK18 319 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 SCPEP1Q9HB40 452 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 ZAR1LA6NP61 321 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 CBR1P16152 277 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 SOWAHCQ53LP3 525 aaPredicted RBP13.68□□□□□ -0.22
CHD4-201ENST00000357008 HIST2H3AQ71DI3 136 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 SSX9Q7RTT3 188 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 ZNF439Q8NDP4 499 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 HLA-HP01893 362 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 STK11Q15831 433 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 SAXO2Q658L1 398 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 RBM45Q8IUH3 476 aaKnown RBP13.68□□□□□ -0.22
CHD4-201ENST00000357008 LINC00346Q8IVM7 164 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 RASD2Q96D21 266 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 RNF170Q96K19 258 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 TAF9BQ9HBM6 251 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 A0A087WZY1 265 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 PLPP1O14494 284 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 KLKB1P03952 638 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 NPY4RP50391 375 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 RNF4P78317 190 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 GABREP78334 506 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 ACVR1Q04771 509 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 NR0B2Q15466 257 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 KCNRGQ8N5I3 272 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 DMBX1Q8NFW5 382 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 LURAP1Q96LR2 239 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 STACQ99469 402 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 LMAN1LQ9HAT1 526 aa13.68□□□□□ -0.22
CHD4-201ENST00000357008 RGPD8O14715 1765 aaPredicted RBP13.67□□□□□ -0.22
CHD4-201ENST00000357008 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.67□□□□□ -0.22
CHD4-201ENST00000357008 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.67□□□□□ -0.22
CHD4-201ENST00000357008 ZNF133P52736 654 aaPredicted RBP13.67□□□□□ -0.22
CHD4-201ENST00000357008 BAXQ07812 192 aa13.67□□□□□ -0.22
CHD4-201ENST00000357008 KANSL1Q7Z3B3 1105 aa13.67□□□□□ -0.22
CHD4-201ENST00000357008 OR10Z1Q8NGY1 313 aa13.67□□□□□ -0.22
CHD4-201ENST00000357008 OR52I2Q8NH67 350 aa13.67□□□□□ -0.22
CHD4-201ENST00000357008 C14orf79Q96F83 325 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms