RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 KLHL13Q9P2N7 655 aa16.2■□□□□ 0.18
SMARCD3-202ENST00000356800 TNFRSF10DQ9UBN6 386 aa16.2■□□□□ 0.18
SMARCD3-202ENST00000356800 LHX6Q9UPM6 363 aa16.2■□□□□ 0.18
SMARCD3-202ENST00000356800 LSM2Q9Y333 95 aaKnown RBP16.2■□□□□ 0.18
SMARCD3-202ENST00000356800 NOX1Q9Y5S8 564 aa16.2■□□□□ 0.18
SMARCD3-202ENST00000356800 PRRC2CQ9Y520 2896 aaKnown RBP16.19■□□□□ 0.18
SMARCD3-202ENST00000356800 NPIPA5E9PKD4 350 aa16.19■□□□□ 0.18
SMARCD3-202ENST00000356800 TRMUO75648 421 aaKnown RBP16.19■□□□□ 0.18
SMARCD3-202ENST00000356800 ACTL6AO96019 429 aa16.19■□□□□ 0.18
SMARCD3-202ENST00000356800 IGHG3P01860 377 aa16.19■□□□□ 0.18
SMARCD3-202ENST00000356800 MYL12AP19105 171 aa16.19■□□□□ 0.18
SMARCD3-202ENST00000356800 TMBIM6P55061 237 aa16.19■□□□□ 0.18
SMARCD3-202ENST00000356800 SRYQ05066 204 aa16.19■□□□□ 0.18
SMARCD3-202ENST00000356800 BCL2A1Q16548 175 aa16.19■□□□□ 0.18
SMARCD3-202ENST00000356800 TIGD6Q17RP2 521 aa16.19■□□□□ 0.18
SMARCD3-202ENST00000356800 CNPY1Q3B7I2 92 aa16.19■□□□□ 0.18
SMARCD3-202ENST00000356800 PLEKHN1Q494U1 663 aaPredicted RBP16.19■□□□□ 0.18
SMARCD3-202ENST00000356800 SLC35D3Q5M8T2 416 aa16.19■□□□□ 0.18
SMARCD3-202ENST00000356800 ADCK1Q86TW2 530 aa16.19■□□□□ 0.18
SMARCD3-202ENST00000356800 UEVLDQ8IX04 471 aa16.19■□□□□ 0.18
SMARCD3-202ENST00000356800 ISOC1Q96CN7 298 aa16.19■□□□□ 0.18
SMARCD3-202ENST00000356800 TSSK2Q96PF2 358 aa16.19■□□□□ 0.18
SMARCD3-202ENST00000356800 SNX18Q96RF0 628 aa16.19■□□□□ 0.18
SMARCD3-202ENST00000356800 NAA11Q9BSU3 229 aaPredicted RBP16.19■□□□□ 0.18
SMARCD3-202ENST00000356800 LDAHQ9H6V9 325 aa16.19■□□□□ 0.18
SMARCD3-202ENST00000356800 RPRD1BQ9NQG5 326 aaKnown RBP16.19■□□□□ 0.18
SMARCD3-202ENST00000356800 CHCHD3Q9NX63 227 aaKnown RBP16.19■□□□□ 0.18
SMARCD3-202ENST00000356800 CLEC2DQ9UHP7 191 aa16.19■□□□□ 0.18
SMARCD3-202ENST00000356800 NPIPA1Q9UND3 350 aa16.19■□□□□ 0.18
SMARCD3-202ENST00000356800 RASD1Q9Y272 281 aa16.19■□□□□ 0.18
SMARCD3-202ENST00000356800 B3GNT3Q9Y2A9 372 aa16.19■□□□□ 0.18
SMARCD3-202ENST00000356800 PRSS37A4D1T9 235 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 DCTN6O00399 190 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 BCL10O95999 233 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 SPI1P17947 270 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 GSTT1P30711 240 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 ATP6V1E1P36543 226 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 DAP3P51398 398 aaKnown RBP16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 RPS7P62081 194 aaKnown RBP16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 LGALS3BPQ08380 585 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 POU4F2Q12837 409 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 GGTLC2Q14390 218 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 SHFQ7M4L6 423 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 SIAH3Q8IW03 269 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 PM20D2Q8IYS1 436 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 OR4F15Q8NGB8 312 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 OR51L1Q8NGJ5 315 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 YIPF6Q96EC8 236 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 RACGAP1Q9H0H5 632 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 SPENQ96T58 3664 aaKnown RBP16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 TMEM129A0AVI4 362 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 XKRYO14609 159 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 ETV1P50549 477 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 BIDP55957 195 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 SLC17A1Q14916 467 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 PON3Q15166 354 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 C3AR1Q16581 482 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 LINC00303Q3SY05 128 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 LCN1P1Q5VSP4 162 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 ANKRD13BQ86YJ7 626 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 OR51G2Q8NGK0 314 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 ROBO4Q8WZ75 1007 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 ZHX1-C8orf76Q96EF9 292 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 OR5M11Q96RB7 305 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 TIMP4Q99727 224 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 EMC6Q9BV81 110 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 FUNDC2Q9BWH2 189 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 SYT4Q9H2B2 425 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 EXO5Q9H790 373 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 INPP5EQ9NRR6 644 aa16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 VSX1Q9NZR4 365 aaPredicted RBP16.18■□□□□ 0.18
SMARCD3-202ENST00000356800 ZZEF1O43149 2961 aa16.17■□□□□ 0.18
SMARCD3-202ENST00000356800 SLC22A23A1A5C7 686 aa16.17■□□□□ 0.18
SMARCD3-202ENST00000356800 A6NIZ1 184 aa16.17■□□□□ 0.18
SMARCD3-202ENST00000356800 RENP00797 406 aa16.17■□□□□ 0.18
SMARCD3-202ENST00000356800 LIMS3P0CW19 117 aa16.17■□□□□ 0.18
SMARCD3-202ENST00000356800 LIMS4P0CW20 117 aa16.17■□□□□ 0.18
SMARCD3-202ENST00000356800 ZNF43P17038 809 aa16.17■□□□□ 0.18
SMARCD3-202ENST00000356800 PYCR1P32322 319 aa16.17■□□□□ 0.18
SMARCD3-202ENST00000356800 SLC16A1P53985 500 aa16.17■□□□□ 0.18
SMARCD3-202ENST00000356800 RAP1BP61224 184 aa16.17■□□□□ 0.18
SMARCD3-202ENST00000356800 RAP1AP62834 184 aa16.17■□□□□ 0.18
SMARCD3-202ENST00000356800 C1DQ13901 141 aaKnown RBP16.17■□□□□ 0.18
SMARCD3-202ENST00000356800 POU4F3Q15319 338 aa16.17■□□□□ 0.18
SMARCD3-202ENST00000356800 SPHARQ15513 63 aa16.17■□□□□ 0.18
SMARCD3-202ENST00000356800 MED22Q15528 200 aa16.17■□□□□ 0.18
SMARCD3-202ENST00000356800 LINC01590Q5TEZ4 76 aa16.17■□□□□ 0.18
SMARCD3-202ENST00000356800 ABLIM2Q6H8Q1 611 aa16.17■□□□□ 0.18
SMARCD3-202ENST00000356800 RPUSD3Q6P087 351 aaKnown RBP16.17■□□□□ 0.18
SMARCD3-202ENST00000356800 OR6V1Q8N148 313 aa16.17■□□□□ 0.18
SMARCD3-202ENST00000356800 MEIOBQ8N635 442 aa16.17■□□□□ 0.18
SMARCD3-202ENST00000356800 RAB2BQ8WUD1 216 aa16.17■□□□□ 0.18
SMARCD3-202ENST00000356800 WDYHV1Q96HA8 205 aa16.17■□□□□ 0.18
SMARCD3-202ENST00000356800 KCNK17Q96T54 332 aa16.17■□□□□ 0.18
SMARCD3-202ENST00000356800 ZNF649Q9BS31 505 aa16.17■□□□□ 0.18
SMARCD3-202ENST00000356800 ADGRL4Q9HBW9 690 aa16.17■□□□□ 0.18
SMARCD3-202ENST00000356800 MOKQ9UQ07 419 aa16.17■□□□□ 0.18
SMARCD3-202ENST00000356800 BSNQ9UPA5 3926 aa16.16■□□□□ 0.18
SMARCD3-202ENST00000356800 FAM171A2A8MVW0 826 aa16.16■□□□□ 0.18
SMARCD3-202ENST00000356800 MYL12BO14950 172 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms