RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 SLC48A1Q6P1K1 146 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 C6orf15Q6UXA7 325 aaPredicted RBP5.97□□□□□ -1.45
UPF2-201ENST00000356352 Q6ZRG5 221 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 MAML2Q8IZL2 1156 aaPredicted RBP5.97□□□□□ -1.45
UPF2-201ENST00000356352 RHOXF1Q8NHV9 184 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 ABHD4Q8TB40 342 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 FAM213BQ8TBF2 198 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 LGALS14Q8TCE9 139 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 SLC38A5Q8WUX1 472 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 HRASLS5Q96KN8 279 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 NIPSNAP3BQ9BS92 247 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 JAM3Q9BX67 310 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 RAB6CQ9H0N0 254 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 GNB4Q9HAV0 340 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 ASIC5Q9NY37 505 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 PSORS1C1Q9UIG5 152 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 OPN1LWP04000 364 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 ITGB8P26012 769 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 MAP2K6P52564 334 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 RELAQ04206 551 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 ERV3-1Q14264 604 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.97□□□□□ -1.45
UPF2-201ENST00000356352 FAM162BQ5T6X4 162 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 OR5M10Q6IEU7 315 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 SLCO4C1Q6ZQN7 724 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 H1FNTQ75WM6 255 aaPredicted RBP5.97□□□□□ -1.45
UPF2-201ENST00000356352 FJX1Q86VR8 437 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 PLPP6Q8IY26 295 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 DND1Q8IYX4 353 aaKnown RBP5.97□□□□□ -1.45
UPF2-201ENST00000356352 C3orf58Q8NDZ4 430 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 SEMA6DQ8NFY4 1073 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 OR6K3Q8NGY3 331 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 OR2AE1Q8NHA4 323 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 LIPHQ8WWY8 451 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 C11orf40Q8WZ69 217 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 SLC39A13Q96H72 371 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 BCO1Q9HAY6 547 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 HEYLQ9NQ87 328 aaPredicted RBP5.97□□□□□ -1.45
UPF2-201ENST00000356352 RNF24Q9Y225 148 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 POLDIP2Q9Y2S7 368 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 NALCNQ8IZF0 1738 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 HSPB2A8KAH6 182 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 J3KTA2 159 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 SOCS6O14544 535 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 FBXO24O75426 580 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 CD14P08571 375 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 PXNP49023 591 aaPredicted RBP5.97□□□□□ -1.45
UPF2-201ENST00000356352 EDDM3BP56851 147 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 HSPB2Q16082 182 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 C4orf17Q53FE4 359 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 EMC4Q5J8M3 183 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 PRAMEF20Q5VT98 475 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 STEAP1BQ6NZ63 245 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 IL34Q6ZMJ4 242 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 H2BFWTQ7Z2G1 175 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 TMEFF1Q8IYR6 380 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 ZNF687Q8N1G0 1237 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 SCCPDHQ8NBX0 429 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 OR10J5Q8NHC4 309 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 LINC01599Q8WXQ3 324 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 HSD17B8Q92506 261 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 ARRDC3Q96B67 414 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 FOXN4Q96NZ1 517 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 TNFRSF13CQ96RJ3 184 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 GAREM1Q9H706 876 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 ERVMER34-1Q9H9K5 563 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 TAS2R16Q9NYV7 291 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 EMCNQ9ULC0 261 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 PIGLQ9Y2B2 252 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 ARFGEF2Q9Y6D5 1785 aa5.97□□□□□ -1.45
UPF2-201ENST00000356352 A0A0B4J2A0 478 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 MEIS3P2A8K0S8 358 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 P2RY10O00398 339 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 SLC16A6O15403 523 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 CNIH1O95406 144 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 TACR1P25103 407 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 RPS25P62851 125 aaKnown RBP5.96□□□□□ -1.45
UPF2-201ENST00000356352 OPCMLQ14982 345 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 C1orf140Q5VVS0 124 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 ZNF626Q68DY1 528 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 OVCH1Q7RTY7 1134 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 SLC51BQ86UW2 128 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 MEX3DQ86XN8 651 aaKnown RBP5.96□□□□□ -1.45
UPF2-201ENST00000356352 BAGE3Q86Y29 109 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 BAGE2Q86Y30 109 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 ST7LQ8TDW4 575 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 GHSRQ92847 366 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 TMEM106AQ96A25 262 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 SEMA4CQ9C0C4 833 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 OR11A1Q9GZK7 315 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 METTL17Q9H7H0 456 aaPredicted RBP5.96□□□□□ -1.45
UPF2-201ENST00000356352 SCPEP1Q9HB40 452 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 SHPKQ9UHJ6 478 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 HCFC2Q9Y5Z7 792 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 A0A1B0GWA3 101 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 CALCBP10092 127 aa5.96□□□□□ -1.45
UPF2-201ENST00000356352 MGST1P10620 155 aaKnown RBP5.96□□□□□ -1.45
UPF2-201ENST00000356352 ELAVL4P26378 380 aaKnown RBP5.96□□□□□ -1.45
UPF2-201ENST00000356352 NOVP48745 357 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms